CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadI PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20 Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ + + +V+ + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL S + +++EAFA LAN +LLG ++ K NV GG++A GHP +GA ++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFACEVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGAWMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadI PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20 Identity = 71/240 (29.58%), Postives = 112/240 (46.67%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G E++ V + S +D + G A +LRP+F GTVTA N++ ++DGAAA+++++ + +LGL + + YA A + PA + P A+ AGL + + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWSEGKLTNEVMTAYVPPYKAPLS----EDNNIRGNSTLADYARLRPAFDRKHGTVTAANSTPLTDGAAAVIMMTESRAKELGLTPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALDRAGLTLADLTLIDMHEAFAAQTLANVQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadI PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20 Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S +R A G A E++ + S +D + G A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + + +++EAFA LAN +LLG ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQRAAQAWAEGKLADEVMTTYAPPYKEPFS----EDNNIRGNSTLADYAKLRPAFDRQHGTVTAANSTPLTDGAAAVILMTESRAKELGLAPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTLADLSLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadI PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19 Identity = 58/181 (32.04%), Postives = 93/181 (51.38%), Query Frame = -1 Query: 178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666 KLRP+F G+VTA N++ ++DG AA++L+ K +LG++++ I GYA +A E P A K + N GLE S + +++EAFA ALAN K+ ++ DK NV GG++A GHP +GAR++ L L++ +A+++E+ Sbjct: 254 KLRPAFDRQYGSVTAANSTPLTDGGAAVMLMREGKAKELGMEILGYIRGYAFSAIGVEKDMLMGPTYATAKVLENTGLELSDLTLIDMHEAFAAQALANVKMFASDKFAQENLGRSKAIGEIDMDKFNVLGGSIAYGHPFAATGARMMTQTLRELKRRGGGIALNTACAAGGLGAAMILEV 434
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadI PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19 Identity = 70/242 (28.93%), Postives = 114/242 (47.11%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPS--TIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE QD A S + A + G E++ V R + S V KD L + KL+P+F G+VTA N++ ++DGAAA++++S + +LGLQ + + +A A E P+ A P A+ AG+ + + +++EAFA LAN K+ ++ DK NV GG++A GHP +GAR++ L L++ +A++VE+ Sbjct: 199 REEQDALAHRSHQLAAKAWEQGLLHDEVMTAYVPPYRTQISEDNNVRKDSSLASY-----AKLKPAFDRKHGSVTAANSTPLTDGAAAVLMMSESRAKELGLQPLGYLRSFAFSAIDVWEDMLLGPSYATPLALDRAGIGLADLTLIDMHEAFAAQTLANLKMFASDEFAQQKLGRSRAIGEVDMDKFNVLGGSIAYGHPFAATGARMITQTLHELKRRGGGLGLTTACAAGGLGAAMIVEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEWM (3-ketoacyl-CoA thiolase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadI PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19 Identity = 68/241 (28.22%), Postives = 111/241 (46.06%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 R +QD A S ++G A E++ V + +D+D + + + KLRP+F GTVTA ++ ++DGA+A++L+S + LG I I YA A E P+ A P A+ AG+E + E++EAFA ALAN K+ ++ +K NV GG++A GHP +GAR++ + L++ +A++VE+ Sbjct: 199 RADQDALAHRSHSLATETWNSGNLAQEVMTAHVPPYKA----FIDRDNNIRENSSIESYAKLRPAFDRKHGTVTAATSTPLTDGASAILLMSESRAKALGYNPIGYIKSYAFSAIDVWEDMLMGPSYATPIALKRAGMELEDLTLIEMHEAFAAQALANMKMFASKKFAQEKLGRNRAIGEIDMNKFNVLGGSLAYGHPFAATGARLITQVCNELKRRGGGTGLTTACAAGGLGAAMIVEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadI PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19 Identity = 73/242 (30.17%), Postives = 115/242 (47.52%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA--KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKL----------LGLNP-------DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE QD+ A S + A ++G E++ V P ++ + D A + +LRP+F GTVTA N++ ++DGAAA++++S K LGL + + YA +A + PA A P A++ AG+ + + +++EAFA LAN KL LG N K NV GG++A GHP +GAR++ L LR+ +A+V+E+ Sbjct: 199 REEQDELAHRSHKLAAQAWESGVLRDEVMTAYVP-----PYEKALSEDNNVRHDSAIEQYSRLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESKAKSLGLTPLGYLRSYAFSAIGVQRDMLLGPAYASPLALARAGVALADLTLIDMHEAFAAQTLANLKLFASDEFARNQLGRNAALGEVDRAKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMVLEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.932e-19 Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = -1 Query: 250 VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 714 +DKD + + + KLRP+F GTVTA N++ ++DGAAA++L+ + +LGL+ + I YA +A E P+ A P A+ AG+ S + +++EAFA LAN K+ G ++ DK NV GG++A GHP +GAR++ L L++ Sbjct: 238 IDKDNNIREDSTLESYAKLRPAFDRKFGTVTAANSTPLTDGAAAILLMREGRAKELGLKPLGYIRSYAFSAIGVEQDMLMGPSYATPMALDRAGISLSDLTLIDMHEAFAAQTLANVKMFGSKKFAQENLGRSQAIGEIDMDKFNVLGGSLAYGHPFAATGARMITQTLRELQR 411
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadI PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.932e-19 Identity = 73/242 (30.17%), Postives = 115/242 (47.52%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPS--TIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKL----------LGLNP-------DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE QD+ A S + A ++G E++ V S V D L ++ +LRP+F GTVTA N++ ++DGAAA++++S + LGL + + YA +A + PA A P A++ AG++ + + +++EAFA LAN KL LG N K NV GG++A GHP +GAR++ L LR+ +A+V+E+ Sbjct: 199 REEQDELAHRSHKLAAQAWESGVLRDEVMTAYVPPYEKALSEDNNVRHDSALEQYS-----RLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESRAKSLGLTPLGYLRSYAFSAIGVQRDMLLGPAYASPLALARAGVKLADLTLIDMHEAFAAQTLANLKLFASDEFARHQLGRNAALGEVDRAKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMVLEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_KLEP3 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (strain 342) GN=fadI PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19 Identity = 69/240 (28.75%), Postives = 112/240 (46.67%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP-AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S + A + G + E++ R +++D + K A +KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + + +++EAFA LAN + L ++ K NV GG++A GHP +GAR++ L LR+ +A++VE Sbjct: 199 REQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREP----LEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLTPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTLADLTLIDMHEAFAAQTLANLQCLASERFAREVLGRSQATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMIVE 434 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |