CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHIBS (3-ketoacyl-CoA thiolase OS=Shigella boydii serotype 4 (strain Sb227) GN=fadI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   +   +     +V+ +   G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  S +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GA ++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYK---QPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTMSDLTLIDMHEAFAAQTLANIQLLGSERFACEVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGAWMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 71/240 (29.58%), Postives = 112/240 (46.67%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G    E++   V   +   S    +D  + G    A   +LRP+F    GTVTA N++ ++DGAAA+++++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWSEGKLTNEVMTAYVPPYKAPLS----EDNNIRGNSTLADYARLRPAFDRKHGTVTAANSTPLTDGAAAVIMMTESRAKELGLTPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALDRAGLTLADLTLIDMHEAFAAQTLANVQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_CITK8 (3-ketoacyl-CoA thiolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.923e-20
Identity = 73/240 (30.42%), Postives = 112/240 (46.67%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +R   A   G  A E++       +   S    +D  + G    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   LAN +LLG                 ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQRAAQAWAEGKLADEVMTTYAPPYKEPFS----EDNNIRGNSTLADYAKLRPAFDRQHGTVTAANSTPLTDGAAAVILMTESRAKELGLAPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTLADLSLIDMHEAFAAQTLANIQLLGSERFARDVLGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadI PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 58/181 (32.04%), Postives = 93/181 (51.38%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F    G+VTA N++ ++DG AA++L+   K  +LG++++  I GYA +A   E      P  A  K + N GLE S +   +++EAFA  ALAN K+                   ++ DK NV GG++A GHP   +GAR++   L  L++                 +A+++E+
Sbjct:  254 KLRPAFDRQYGSVTAANSTPLTDGGAAVMLMREGKAKELGMEILGYIRGYAFSAIGVEKDMLMGPTYATAKVLENTGLELSDLTLIDMHEAFAAQALANVKMFASDKFAQENLGRSKAIGEIDMDKFNVLGGSIAYGHPFAATGARMMTQTLRELKRRGGGIALNTACAAGGLGAAMILEV 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadI PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.352e-19
Identity = 70/242 (28.93%), Postives = 114/242 (47.11%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPS--TIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE QD  A  S +    A + G    E++   V   R + S    V KD  L  +      KL+P+F    G+VTA N++ ++DGAAA++++S  +  +LGLQ +  +  +A  A    E     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++ DK NV GG++A GHP   +GAR++   L  L++                 +A++VE+
Sbjct:  199 REEQDALAHRSHQLAAKAWEQGLLHDEVMTAYVPPYRTQISEDNNVRKDSSLASY-----AKLKPAFDRKHGSVTAANSTPLTDGAAAVLMMSESRAKELGLQPLGYLRSFAFSAIDVWEDMLLGPSYATPLALDRAGIGLADLTLIDMHEAFAAQTLANLKMFASDEFAQQKLGRSRAIGEVDMDKFNVLGGSIAYGHPFAATGARMITQTLHELKRRGGGLGLTTACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEWM (3-ketoacyl-CoA thiolase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=fadI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19
Identity = 68/241 (28.22%), Postives = 111/241 (46.06%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        ++G  A E++   V   +      +D+D  + +    +   KLRP+F    GTVTA  ++ ++DGA+A++L+S  +   LG   I  I  YA  A    E     P+ A P A+  AG+E   +   E++EAFA  ALAN K+                   ++ +K NV GG++A GHP   +GAR++  +   L++                 +A++VE+
Sbjct:  199 RADQDALAHRSHSLATETWNSGNLAQEVMTAHVPPYKA----FIDRDNNIRENSSIESYAKLRPAFDRKHGTVTAATSTPLTDGASAILLMSESRAKALGYNPIGYIKSYAFSAIDVWEDMLMGPSYATPIALKRAGMELEDLTLIEMHEAFAAQALANMKMFASKKFAQEKLGRNRAIGEIDMNKFNVLGGSLAYGHPFAATGARLITQVCNELKRRGGGTGLTTACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19
Identity = 73/242 (30.17%), Postives = 115/242 (47.52%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA--KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKL----------LGLNP-------DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE QD+ A  S +    A ++G    E++   V      P      ++   + D A  +  +LRP+F    GTVTA N++ ++DGAAA++++S  K   LGL  +  +  YA +A   +      PA A P A++ AG+  + +   +++EAFA   LAN KL          LG N         K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E+
Sbjct:  199 REEQDELAHRSHKLAAQAWESGVLRDEVMTAYVP-----PYEKALSEDNNVRHDSAIEQYSRLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESKAKSLGLTPLGYLRSYAFSAIGVQRDMLLGPAYASPLALARAGVALADLTLIDMHEAFAAQTLANLKLFASDEFARNQLGRNAALGEVDRAKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMVLEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PHOPR (3-ketoacyl-CoA thiolase OS=Photobacterium profundum GN=fadI PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.932e-19
Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = -1
Query:  250 VDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 714
            +DKD  + +    +   KLRP+F    GTVTA N++ ++DGAAA++L+   +  +LGL+ +  I  YA +A   E      P+ A P A+  AG+  S +   +++EAFA   LAN K+ G                 ++ DK NV GG++A GHP   +GAR++   L  L++
Sbjct:  238 IDKDNNIREDSTLESYAKLRPAFDRKFGTVTAANSTPLTDGAAAILLMREGRAKELGLKPLGYIRSYAFSAIGVEQDMLMGPSYATPMALDRAGISLSDLTLIDMHEAFAAQTLANVKMFGSKKFAQENLGRSQAIGEIDMDKFNVLGGSLAYGHPFAATGARMITQTLRELQR 411          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadI PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.932e-19
Identity = 73/242 (30.17%), Postives = 115/242 (47.52%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPS--TIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKL----------LGLNP-------DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE QD+ A  S +    A ++G    E++   V       S    V  D  L ++      +LRP+F    GTVTA N++ ++DGAAA++++S  +   LGL  +  +  YA +A   +      PA A P A++ AG++ + +   +++EAFA   LAN KL          LG N         K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E+
Sbjct:  199 REEQDELAHRSHKLAAQAWESGVLRDEVMTAYVPPYEKALSEDNNVRHDSALEQYS-----RLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESRAKSLGLTPLGYLRSYAFSAIGVQRDMLLGPAYASPLALARAGVKLADLTLIDMHEAFAAQTLANLKLFASDEFARHQLGRNAALGEVDRAKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMVLEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_KLEP3 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (strain 342) GN=fadI PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19
Identity = 69/240 (28.75%), Postives = 112/240 (46.67%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP-AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +    A + G  + E++       R      +++D  + K    A  +KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   LAN + L                  ++  K NV GG++A GHP   +GAR++   L  LR+                 +A++VE
Sbjct:  199 REQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREP----LEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLTPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTLADLTLIDMHEAFAAQTLANLQCLASERFAREVLGRSQATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVTACAAGGLGAAMIVE 434          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADI_SHIBS7.923e-2029.713-ketoacyl-CoA thiolase OS=Shigella boydii serotyp... [more]
FADI_ESCF37.923e-2029.583-ketoacyl-CoA thiolase OS=Escherichia fergusonii ... [more]
FADI_CITK87.923e-2030.423-ketoacyl-CoA thiolase OS=Citrobacter koseri (str... [more]
FADI_VIBPA1.352e-1932.043-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]
FADI_SERP51.352e-1928.933-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]
FADI_SHEWM1.765e-1928.223-ketoacyl-CoA thiolase OS=Shewanella woodyi (stra... [more]
FADI_ERWCT3.011e-1930.173-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
FADI_PHOPR3.932e-1933.913-ketoacyl-CoA thiolase OS=Photobacterium profundu... [more]
FADI_PECCP3.932e-1930.173-ketoacyl-CoA thiolase OS=Pectobacterium carotovo... [more]
FADI_KLEP35.136e-1928.753-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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