CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERE8 (3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 66/241 (27.39%), Postives = 113/241 (46.89%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R++QD  A+ S +    A   G    E++   +       S  + +D  + K    +   KLRP+F    G+VTA N++ ++DGAAA++++S  K  +LGLQ +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A++VE+
Sbjct:  199 RQDQDALALRSHQMAAQAWQQGLLHDEVMTAYIPPF----SDAITEDNNIRKDSTMEQYAKLRPAFDRKHGSVTAANSTPLTDGAAAVMMMSESKAKELGLQPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDSFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBFM (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain MJ11) GN=fadI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 71/244 (29.10%), Postives = 114/244 (46.72%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWE--IVPVEVSAGRGKPSTI-VDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP-----------------DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE QD  A  S           A AW+  ++  EV     +P T+ +D D  +    + A   KLRP+F    G+VTA N++ ++DG AAL+L+S ++  +LG + +  I  +A  A          P+ A P A+  AG+  S +   +++EAFA   L+N K+   N                  DK NV GG++A GHP   +GAR+++  L  L++                 +A+V+E+
Sbjct:  205 REEQDALAHRS-------HTLAAKAWKDGLIQDEVMTAFPEPYTVWLDHDNNIRHDSELASYAKLRPAFDRKYGSVTAANSTPLTDGGAALLLMSEKRAKELGYEPLGYIRSFAFSAIDVHHDMLMGPSYATPMALDKAGISLSDLTLIDMHEAFAAQTLSNVKMFASNKFARECLGRDKAIGEIDMDKFNVLGGSIAYGHPFAATGARMIIQTLRELKRRGGGLGLNTACAAGGLGAAMVLEV 441          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 68/240 (28.33%), Postives = 113/240 (47.08%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP-AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +    A + G  + E++       R      +++D  + K    A  +KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL+ +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   LAN + L                  ++  K NV GG++A GHP   +GAR++   L  +R+                 +A++VE
Sbjct:  199 REQQDALAHRSHQLAAKAWEEGKLSAEVMTAYAPPFREP----LEQDNNIRKNSTLADYQKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLRPLGYLRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTLADLTLIDMHEAFAAQTLANLQCLASDRFAREVLGRSQATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLHEVRRRGGGFGLVTACAAGGLGAAMIVE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.760e-19
Identity = 73/242 (30.17%), Postives = 115/242 (47.52%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKP-STIVDKDEGLGKF-DPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAA-QAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S    +AAQ    +A  ++  EV      P +  ++KD  + +  D A   KLRP F    G+VTA N++ ++DGA+AL+L+S  +   LG   I  I  YA AA    E     P+ A P A+  AG++   +   E++EAFA  ALAN K+                   ++  K NV GG++A GHP   +GAR++  +   L++                 +A+++E+
Sbjct:  199 RADQDAMAHRSHT--LAAQ---TWASGVMKNEVMVAHVPPYNQFIEKDNNIRESSDLASYAKLRPVFDRKHGSVTAANSTPLTDGASALLLMSEGRAKALGYTPIGYIKSYAFAAIDVWEDMLMGPSYATPMALKRAGMQLEDLTLIEMHEAFAAQALANMKMFASKKFAEEKLGQNRAIGEIDMSKFNVLGGSLAYGHPFAATGARLITQMCNELKRRGGGVGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadI PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 56/181 (30.94%), Postives = 94/181 (51.93%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F    G+VTA N++ ++DGAAA++L+   +  +LG++++  I GYA +A   E      P+ A  K + + GL  S +   +++EAFA  ALAN K+                   ++ DK NV GG++A GHP   +GAR++   L  L++                 +A+++E+
Sbjct:  254 KLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIRGYAFSAIGVESDMLMGPSYATSKVLQSTGLALSDLTLIDMHEAFAAQALANVKMFASDKFAQENLGRSKAMGEIDMDKFNVLGGSIAYGHPFAATGARMMTQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadI PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 56/181 (30.94%), Postives = 94/181 (51.93%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F    G+VTA N++ ++DGAAA++L+   +  +LG++++  I GYA +A   E      P+ A  K + + GL  S +   +++EAFA  ALAN K+                   ++ DK NV GG++A GHP   +GAR++   L  L++                 +A+++E+
Sbjct:  254 KLRPAFDRQYGSVTAANSTPLTDGAAAVLLMREGRAKELGMEILGYIRGYAFSAIGVESDMLMGPSYATSKVLQSTGLALSDLTLIDMHEAFAAQALANVKMFASDKFAQENLGRSKAMGEIDMDKFNVLGGSIAYGHPFAATGARMMTQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEPW (3-ketoacyl-CoA thiolase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadI PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 67/241 (27.80%), Postives = 110/241 (45.64%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        +AG  A E++   V   +      +D+D  + +    +   KLRP+F    G+VTA N++ ++DGA+A++L+S  +   LG   I  I  YA  A    E     P+ A P A+  AG+E   +   E++EAFA   LAN ++ G                 ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  199 RADQDALAHRSHTLATETWNAGKLAEEVMAAHVPPYKA----FIDRDNNIRENSKLESYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKSYAFTAIDVWEDMLMGPSYATPMALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCHELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBF1 (3-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=fadI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 71/244 (29.10%), Postives = 113/244 (46.31%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWE--IVPVEVSAGRGKPSTI-VDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNP-----------------DKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE QD  A  S           A AW+  ++  EV     +P T  +D D  +    D A   KLRP+F    G+VTA N++ ++DG AAL+L+S ++  +LG + +  I  +A  A          P+ A P A+  AG+  S +   +++EAFA   L+N K+   N                  +K NV GG++A GHP   +GAR+++  L  L++                 +A+V+E+
Sbjct:  205 REEQDALAHRS-------HTLAAKAWKDGLIQDEVMTAFPEPYTAWLDHDNNIRHDSDLASYAKLRPAFDHKYGSVTAANSTPLTDGGAALLLMSEKRAKELGYEPLGYIRSFAFSAIDVHHDMLMGPSYATPMALDKAGISLSDLTLIDMHEAFAAQTLSNVKMFASNKFAKEYLGRDKAIGEIDMEKFNVLGGSIAYGHPFAATGARMIIQTLRELKRRGGGLGLNTACAAGGLGAAMVLEV 441          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18
Identity = 66/240 (27.50%), Postives = 110/240 (45.83%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAA-QAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            R++QD  A  S      +   G  A E++ V     +    + +D+D    +    +   KL+P F    GTVTA  ++ ++DG AA++L+   +  +LG + +  I  +  AA    +     P+ A P A+  AG+  + +D  E++EAFA  ALAN K+ G                 ++ DK NV GG++A GHP   +GAR++   L  L +                 +A++VE
Sbjct:  198 RQDQDALAHRSHTLATKSWQEGKLAGEVMTVHAEPYK----SFIDRDNCFRENSVLESYAKLKPVFDRKHGTVTAATSTPLTDGGAAILLMREGRAKELGYKPLGYIRSFGFAAIDVWQDMLMGPSYATPIALQRAGMNLADLDLIEMHEAFAAQALANMKMFGSTKFAQEQLGRDKAIGDIDMDKFNVMGGSLAYGHPFAATGARLITQTLNELNRRGGGVGLTTACAAGGLGAAMIVE 433          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPY (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADI_YERE86.708e-1927.393-ketoacyl-CoA thiolase OS=Yersinia enterocolitica... [more]
FADI_VIBFM6.708e-1929.103-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADI_KLEP76.708e-1928.333-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
FADI_SHEAM8.760e-1930.173-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
FADI_VIBVY1.494e-1830.943-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADI_VIBVU1.494e-1830.943-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]
FADI_SHEPW1.494e-1827.803-ketoacyl-CoA thiolase OS=Shewanella piezotoleran... [more]
FADI_VIBF11.952e-1829.103-ketoacyl-CoA thiolase OS=Vibrio fischeri (strain... [more]
FADI_COLP32.549e-1827.503-ketoacyl-CoA thiolase OS=Colwellia psychrerythra... [more]
FADI_YERPY3.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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