CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE+QD A+ S + A G E++ + R I++ + A+ KLRP+F G+VTA N++ ++DGAAA++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR+ +A+++E+ Sbjct: 199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE+QD A+ S + A G E++ + R I++ + A+ KLRP+F G+VTA N++ ++DGAAA++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR+ +A+++E+ Sbjct: 199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE+QD A+ S + A G E++ + R I++ + A+ KLRP+F G+VTA N++ ++DGAAA++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR+ +A+++E+ Sbjct: 199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE+QD A+ S + A G E++ + R I++ + A+ KLRP+F G+VTA N++ ++DGAAA++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR+ +A+++E+ Sbjct: 199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPB (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE+QD A+ S + A G E++ + R I++ + A+ KLRP+F G+VTA N++ ++DGAAA++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR+ +A+++E+ Sbjct: 199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE+QD A+ S + A G E++ + R I++ + A+ KLRP+F G+VTA N++ ++DGAAA++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR+ +A+++E+ Sbjct: 199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 RE+QD A+ S + A G E++ + R I++ + A+ KLRP+F G+VTA N++ ++DGAAA++++S K LGL + + +A A + P+ A P A+ AG+ + + +++EAFA LAN K+ ++ K NV GG++A GHP +GAR++ L LR+ +A+++E+ Sbjct: 199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHESH (3-ketoacyl-CoA thiolase OS=Shewanella sediminis (strain HAW-EB3) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 66/241 (27.39%), Postives = 109/241 (45.23%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 R +QD A S +AG E++ V + + +D+D + + + KLRP+F GTVTA ++ ++DGA+A++L+S + LG I I YA A E P+ A P A+ AG+E + E++EAFA LAN ++ G ++ K NV GG++A GHP +G R++ + L++ +A++VE+ Sbjct: 199 RADQDALAHRSHSLATETWNAGHLTDEVMAAHVPPYK----SFIDRDNNIRENSTIESYAKLRPAFDRKHGTVTAATSTPLTDGASAVLLMSESRAKALGYDPIGYIKSYAFSAIDVWEDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAAEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGAAMIVEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEPA (3-ketoacyl-CoA thiolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 67/241 (27.80%), Postives = 110/241 (45.64%), Query Frame = -1 Query: 178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843 R +QD A S +AG A E++ V + +D+D + + + KLRP+F G+VTA N++ ++DGA+A++L+S + LG I I YA A E P+ A P A+ AG+E + E++EAFA LAN ++ G ++ K NV GG++A GHP +G R++ + L++ +A++VE+ Sbjct: 199 RADQDALAHRSHTLATETWNAGKLAEEVMVAHVPPYKA----FIDRDNNIRENSKLESYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKSYAFTAIDVWEDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLVTQVCHELKRRGGGTGLATACAAGGLGAAMIVEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadI PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18 Identity = 70/240 (29.17%), Postives = 108/240 (45.00%), Query Frame = -1 Query: 181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP-AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843 RE QD A S + A G E++ R S +D + K A KLRP+F GTVTA N++ ++DGAAA++L++ + +LGL + + YA A + PA + P A+ AGL + + +++EAFA L N KL+ ++ K NV GG++A GHP +GAR++ L LR+ +A+V+E Sbjct: 199 REQQDALAHRSHQLAAQAWAEGKLREEVMTAYTPPYREPLS----EDNNIRKTSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRARELGLTPLGYLRSYAFTAVDVWQDMLLGPAWSTPLALERAGLTMADLTLIDMHEAFASQTLTNLKLMASDRFAREVLGRSQATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGFGLVTACAAGGLGAAMVLE 434 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |