CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPB (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERP3 (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHESH (3-ketoacyl-CoA thiolase OS=Shewanella sediminis (strain HAW-EB3) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 66/241 (27.39%), Postives = 109/241 (45.23%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        +AG    E++   V   +    + +D+D  + +    +   KLRP+F    GTVTA  ++ ++DGA+A++L+S  +   LG   I  I  YA  A    E     P+ A P A+  AG+E   +   E++EAFA   LAN ++ G                 ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  199 RADQDALAHRSHSLATETWNAGHLTDEVMAAHVPPYK----SFIDRDNNIRENSTIESYAKLRPAFDRKHGTVTAATSTPLTDGASAVLLMSESRAKALGYDPIGYIKSYAFSAIDVWEDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAAEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEPA (3-ketoacyl-CoA thiolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 67/241 (27.80%), Postives = 110/241 (45.64%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        +AG  A E++   V   +      +D+D  + +    +   KLRP+F    G+VTA N++ ++DGA+A++L+S  +   LG   I  I  YA  A    E     P+ A P A+  AG+E   +   E++EAFA   LAN ++ G                 ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  199 RADQDALAHRSHTLATETWNAGKLAEEVMVAHVPPYKA----FIDRDNNIRENSKLESYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKSYAFTAIDVWEDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLVTQVCHELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ENTS8 (3-ketoacyl-CoA thiolase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadI PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.329e-18
Identity = 70/240 (29.17%), Postives = 108/240 (45.00%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDP-AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S +    A   G    E++       R   S    +D  + K    A   KLRP+F    GTVTA N++ ++DGAAA++L++  +  +LGL  +  +  YA  A    +     PA + P A+  AGL  + +   +++EAFA   L N KL+                  ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+V+E
Sbjct:  199 REQQDALAHRSHQLAAQAWAEGKLREEVMTAYTPPYREPLS----EDNNIRKTSSLADYAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRARELGLTPLGYLRSYAFTAVDVWQDMLLGPAWSTPLALERAGLTMADLTLIDMHEAFASQTLTNLKLMASDRFAREVLGRSQATGEVDESKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGFGLVTACAAGGLGAAMVLE 434          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADI_YERPS3.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPP3.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADI_YERPN3.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_YERPE3.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI... [more]
FADI_YERPB3.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPA3.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_YERP33.329e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_SHESH3.329e-1827.393-ketoacyl-CoA thiolase OS=Shewanella sediminis (s... [more]
FADI_SHEPA3.329e-1827.803-ketoacyl-CoA thiolase OS=Shewanella pealeana (st... [more]
FADI_ENTS83.329e-1829.173-ketoacyl-CoA thiolase OS=Enterobacter sakazakii ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
back to top