CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAES (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=vraB PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18
Identity = 59/199 (29.65%), Postives = 97/199 (48.74%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R  QDDFA  S +      + G  + EI+P +V           ++DE +  +     L +L+P   E  GTVT GN+   +DGA  L+++   +  +LG     K    A     P+     P  A+ + ++   L  + ++  E+NEAF+   +A+Q+ L +  +K+N  GGA+A GHP G SGA ++  L  +  Q
Sbjct:  167 RNEQDDFAYRSHQLASKNMNNGNISQEILPFKVKG------EYFNQDESIKPQLTLRTLGRLKPLLNE--GTVTVGNSCKKNDGAVLLIVMEENRARQLGFTEGIKFVNSATVGVQPQYLGVGPVPAVNQLLAQERLTINDINAVELNEAFSSQVIASQQQLNIPLNKLNCWGGAIATGHPYGASGAALVTRLFYMKHQ 357          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAEQ (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=vraB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 60/199 (30.15%), Postives = 97/199 (48.74%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R  QDDFA  S +      + G  + EI+P +V           ++DE +      K L +L+P   E  GTVT GN+   +DGA  L+++   +  +LG     K    A     P+     P  A+ + ++   L  + ++  E+NEAF+   +A+Q+ L +  +K+N  GGA+A GHP G SGA ++  L  +  Q
Sbjct:  167 RNEQDDFAYRSHQLASKNMNNGNISQEILPFKVKG------ECFNQDESIKPQLTLKTLGRLKPLLNE--GTVTVGNSCMKNDGAVLLIVMEENRARQLGFTEGIKFVNSATVGVQPQYLGVGPVPAVNQLLARERLTINDINAVELNEAFSSQVIASQQQLNIPLNKLNCWGGAIATGHPYGASGAALVTRLFYMKHQ 357          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_YERPG (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadI PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE+QD  A+ S +    A   G    E++   +   R     I++ +        A+  KLRP+F    G+VTA N++ ++DGAAA++++S  K   LGL  +  +  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  LR+                 +A+++E+
Sbjct:  199 REDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYR---EAIIEDNNIRKDSILAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRSFAFSAIDVWQDMLLGPSYATPLALDRAGITLADLTLIDMHEAFAAQTLANLKMFASDTFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLTTACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadI PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 64/241 (26.56%), Postives = 110/241 (45.64%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        ++G    E++   +   +      +D+D  + +    +   KLRP+F    GTVTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++ G                 ++  K NV GG++A GHP   +G R++  +   L++                 +A+++E+
Sbjct:  199 RADQDALAHRSHTLATETWNSGHLRNEVMTAHIPPYK----QFIDRDNNIRENSVLESYAKLRPAFDRKHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCNELKRRGGGTGLATACAAGGLGAAMILEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadI PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 65/241 (26.97%), Postives = 111/241 (46.06%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        ++G    E++   V+  +      +D+D  + +    +   KLRP+F    G+VTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++ G                 ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  199 RADQDALAHRSHTLATETWNSGNLRDEVMTAHVAPYK----QFIDRDNNIRENSVLESYAKLRPAFDRKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFGSKKFAAEKLGRNRAIGDIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ALTMD (3-ketoacyl-CoA thiolase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=fadI PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18
Identity = 68/242 (28.10%), Postives = 114/242 (47.11%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLR---KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAA-QAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            RE QD  A  S      + +AG  + E++       +      +++D  + +FD +KL    KLRP F +  G+VTA NA+ ++DGA+A+++++  +  +LG   +  I  YA AA    E     P+ A P A+  AG+  + +   E++EAFA   LAN K+                   ++ DK NV G ++A GHP   +G R++  +L  L +                 +A++VE
Sbjct:  199 REEQDKLAHRSHSLAAESWEAGKLSSEVMTAYAEPYKAA----LERDNNV-RFD-SKLEGYAKLRPVFDKKYGSVTAANATPLTDGASAVLMMTESRAKELGYTPLGYIKSYAFAAIDVWEDMLMGPSYATPIALDRAGMTLNDLTLIEMHEAFAAQTLANVKMFASDKFAKEKLGRDKATGEIDMDKFNVMGSSIAYGHPFAATGTRMITQMLNELNRRGGGSGLLTACAAGGLGAAMIVE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_ERWT9 (3-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fadI PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.686e-18
Identity = 64/241 (26.56%), Postives = 111/241 (46.06%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGL-GKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            RE QD  A+ S +R   A   G    E++   V           ++D  +  +       +LRP+F    GTVTA N++ ++DGAAA++L++  +  +LG+  +  +  YA  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++ ++ NV GG++A GHP   +GAR++   L  LR+                 +A+V+E+
Sbjct:  199 REQQDALALRSHQRAAHAWQQGLLNDEVMTACVPPWEQP----FEQDNNVRAESKMQDYARLRPAFDRRHGTVTAANSTPLTDGAAAVILMTASRARELGIAPLGFLRSYAFSAIDVRQDMLLGPSYASPLALDRAGITLADLSLIDMHEAFAAQTLANLKMFADERFAREVLDRPRALGEVDMERFNVLGGSIAYGHPFAATGARMITQTLNELRRRGGGLGLVTACAAGGLGAAMVLEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 56/181 (30.94%), Postives = 92/181 (50.83%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F    G+VTA N++ ++DGAAA++L+   K  +LGL+++  I  YA AA   E      P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  L++                 +A+++E+
Sbjct:  254 KLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAAIGVEKDMLMGPSYATPIALDRAGITLNDLTLIDMHEAFAAQTLANLKMFASDKFAQEQLGRAQAIGEVDMSKFNVLGGSLAYGHPFAATGARMITQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadI PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 56/181 (30.94%), Postives = 92/181 (50.83%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEM-FTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F    G+VTA N++ ++DGAAA++L+   K  +LGL+++  I  YA AA   E      P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++  K NV GG++A GHP   +GAR++   L  L++                 +A+++E+
Sbjct:  254 KLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAAIGVEKDMLMGPSYATPIALDRAGITLNDLTLIDMHEAFAAQTLANLKMFASDKFAQEQLGRAQAIGEVDMSKFNVLGGSLAYGHPFAATGARMITQTLRELKRRGGGLALNTACAAGGLGAAMILEV 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEON (3-ketoacyl-CoA thiolase OS=Shewanella oneidensis GN=fadI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 56/187 (29.95%), Postives = 91/187 (48.66%), Query Frame = -1
Query:  178 DPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 684
            D A   KLRP+F +  G+VTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  249 DLASYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGDIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
VRAB_STAES4.348e-1829.65Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAEQ5.678e-1830.15Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
FADI_YERPG5.678e-1827.083-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_SHEFN5.678e-1826.563-ketoacyl-CoA thiolase OS=Shewanella frigidimarin... [more]
FADI_SHEDO5.678e-1826.973-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]
FADI_ALTMD7.416e-1828.103-ketoacyl-CoA thiolase OS=Alteromonas macleodii (... [more]
FADI_ERWT99.686e-1826.563-ketoacyl-CoA thiolase OS=Erwinia tasmaniensis (s... [more]
FADI_VIBCH1.652e-1730.943-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadI... [more]
FADI_VIBC31.652e-1730.943-ketoacyl-CoA thiolase OS=Vibrio cholerae serotyp... [more]
FADI_SHEON1.652e-1729.953-ketoacyl-CoA thiolase OS=Shewanella oneidensis G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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