CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 66/217 (30.41%), Postives = 104/217 (47.93%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKF-DPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD  A  S      A   G  + E+    V   +      +++D  + +  D A   KL+P F    GTVTA NA+ ++DGAAA++L+   +  +LGL+ +  I  +A  A    +     P+ A P A+  AG+  + +   +++EAFA   LAN K+                   ++ DK NV GG++A GHP   +GAR++   L  LR+
Sbjct:  199 REAQDALAHRSHTLAAQAWADGKLSGEVFTAHVPPYKSP----LERDNNIRESSDLASYAKLKPVFDRVHGTVTAANATPLTDGAAAVLLMREGRAKELGLEPLGYIRSFAFSAIDVWQDMLMGPSYATPLALERAGITLADLTLIDMHEAFAAQTLANLKMFASAEFARDKLGRSQAIGEVDMDKFNVLGGSLAYGHPFAATGARMITQTLHELRR 411          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadI PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.652e-17
Identity = 66/217 (30.41%), Postives = 104/217 (47.93%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKF-DPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD  A  S      A   G  + E+    V   +      +++D  + +  D A   KL+P F    G+VTA NA+ ++DGAAA++L+   +  +LGL+ +  I  +A  A    +     P+ A P A+  AG+  S +   +++EAFA   LAN K+                   ++ DK NV GG++A GHP   +GAR++   L  LR+
Sbjct:  199 REAQDALAHRSHTLAAQAWADGKLSGEVFTAHVPPYKAP----LERDNNIRESSDLASYAKLKPVFDRVHGSVTAANATPLTDGAAAVLLMREGRARELGLEPLGYIRSFAFSAIDVWQDMLMGPSYATPLALDRAGITLSDLTLIDMHEAFAAQTLANLKMFASKEFAQSKLGRDQAIGEVDMDKFNVLGGSLAFGHPFAATGARMITQTLHELRR 411          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEHH (3-ketoacyl-CoA thiolase OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17
Identity = 65/241 (26.97%), Postives = 110/241 (45.64%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        +AG  A E++   V   +    + +D+D  + +    +   KLRP+F    G+VTA N++ ++DGA+A++L+S  +   LG   I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  199 RADQDALAHRSHTLATETWNAGKLAEEVMAAHVPPYK----SFIDRDNNIRENSTLESYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSEGRAKALGYTPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLVTQVCHELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadI PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 64/241 (26.56%), Postives = 109/241 (45.23%), Query Frame = -1
Query:  178 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 843
            R +QD  A  S        D+G    E++   V   +    + +D+D  + +        KLRP+F    G+VTA N++ ++DGA+A++L+S  +   LG + I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  199 RADQDALAHRSHTLATETWDSGHLRDEVMVAHVPPYK----SFIDRDNNIRENSSLDSYAKLRPAFDRKHGSVTAANSTPLTDGASAVLLMSESRAKALGYEPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAKEKLGRDRAIGEIDMTKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PSEA6 (3-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=fadI PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 70/242 (28.93%), Postives = 113/242 (46.69%), Query Frame = -1
Query:  181 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLR---KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAA-QAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVE 843
            R +QD  A  S      + + G  A E++    +A      +  +KD  + +FD +KL    KLRP F +  GTVTA NA+ ++DGA+A+++++  +   LG   +  I  YA AA    E     P+ A P A+  AG+  + +   E++EAFA   LAN K+                   ++  K NV G ++A GHP   +G R++  +L  L +                A+A++VE
Sbjct:  199 RADQDKLAHRSHSLAAQSWNEGKLAGEVM----TAYPAPYKSAFEKDNNI-RFD-SKLEGYAKLRPVFDKKHGTVTAANATPLTDGASAVLMMTESRAKALGYTPLGYIKSYAFAAIDVWEDMLMGPSYATPMALDRAGMTLNDLTLIEMHEAFAAQTLANIKMFASDKFAQEKLGRSKATGEIDMAKFNVMGSSLAYGHPFAATGTRMITQMLNELNRRGGGSGLLTACAAGGLAAAMIVE 434          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHESW (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F +  GTVTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                  A++VE+
Sbjct:  255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRPIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHESR (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/187 (29.41%), Postives = 91/187 (48.66%), Query Frame = -1
Query:  178 DPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 684
            D +   KLRP+F +  G+VTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  249 DLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHESM (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/187 (29.41%), Postives = 91/187 (48.66%), Query Frame = -1
Query:  178 DPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 684
            D +   KLRP+F +  G+VTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  249 DLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHESA (3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/187 (29.41%), Postives = 91/187 (48.66%), Query Frame = -1
Query:  178 DPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 684
            D +   KLRP+F +  G+VTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                 +A++VE+
Sbjct:  249 DLSSYAKLRPAFDKKHGSVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFTAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLATACAAGGLGAAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEPC (3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F +  GTVTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                  A++VE+
Sbjct:  255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAINVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADI_AERS41.652e-1730.413-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
FADI_AERHH1.652e-1730.413-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]
FADI_SHEHH2.158e-1726.973-ketoacyl-CoA thiolase OS=Shewanella halifaxensis... [more]
FADI_SHELP2.818e-1726.563-ketoacyl-CoA thiolase OS=Shewanella loihica (str... [more]
FADI_PSEA62.818e-1728.933-ketoacyl-CoA thiolase OS=Pseudoalteromonas atlan... [more]
FADI_SHESW3.681e-1730.393-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHESR3.681e-1729.413-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHESM3.681e-1729.413-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHESA3.681e-1729.413-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ... [more]
FADI_SHEPC3.681e-1730.393-ketoacyl-CoA thiolase OS=Shewanella putrefaciens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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