CX043431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1 Query: 178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L++ A++VE+ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1 Query: 178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L++ A++VE+ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1 Query: 178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L++ A++VE+ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17 Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = -1 Query: 250 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 666 KLRP+F + GTVTA N++ ++DGA+A++L+S + LG Q I I YA A + P+ A P A+ AG+E + E++EAFA LAN ++ ++ K NV GG++A GHP +G R++ + L++ Sbjct: 255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKR 411
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadI PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17 Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1 Query: 178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666 KLRP+F GTVTA N++ ++DGAAA++L+ LG + + + YA A + P+ A P A+ AG+ + +++EAFA LAN K+ ++ DK NV GG++A GHP +GAR++ +L LR+ +A+V+E+ Sbjct: 255 KLRPAFDRKYGTVTAANSTPLTDGAAAVILMRESVAKALGTKPLGYLRSYAFSAIDVWQDMLLGPSYATPIALDRAGITLKDLTLIDMHEAFAAQTLANLKMFASDEFARNKLGRAQAIGEVDMDKFNVLGGSIAYGHPFAATGARMVTQVLNELRRRGGGLGLTTACAAGGLGTAMVLEV 435
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAHJ (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus haemolyticus (strain JCSC1435) GN=vraB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.069e-16 Identity = 60/196 (30.61%), Postives = 89/196 (45.41%), Query Frame = -1 Query: 259 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGV 843 R +QD FA S + G EIVP+ + + D+DE L A+L +LRP GTVT GN+ +DGA +++ E + +G++ P + P A+ + + L + E+NEAF+ LA+ L L DKVN GGA+A GHP SGA ++ LL + Sbjct: 167 RNDQDLFAARSHRLVATHFNNGDINREIVPLTIKGA------LFDRDESLKPNLTEARLHRLRPILPN--GTVTVGNSCMKNDGAGIALIMEKEMAVAMGIKWGMLYRDAVTTGVDPTLLGIGPVPAVSQLLKRQKLNIEDISAIELNEAFSSQVLASINELHLGLDKVNQWGGAIATGHPYSASGAALVARLLNL 354
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAW (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MW2) GN=vraB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1 Query: 268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843 RE QD+FA S + G + EI+P+ V I + DE L P + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAS (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MSSA476) GN=vraB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1 Query: 268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843 RE QD+FA S + G + EI+P+ V I + DE L P + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAN (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain N315) GN=vraB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1 Query: 268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843 RE QD+FA S + G + EI+P+ V I + DE L P + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAM (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=vraB PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1 Query: 268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843 RE QD+FA S + G + EI+P+ V I + DE L P + +P K GGTVTA N+ +DGA L+++ + +LG + P AI + L ++ EINEAF+ +A Q+ L ++ ++N+ GGA+A GHP G SGA+++ L Sbjct: 167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351 The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bpback to top |