CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB9 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS195) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F +  GTVTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                  A++VE+
Sbjct:  255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB5 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F +  GTVTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                  A++VE+
Sbjct:  255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB2 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS223) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F +  GTVTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++                  A++VE+
Sbjct:  255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKRRGGGTGLTTACAAGGLGVAMIVEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_SHEB8 (3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185) GN=fadI PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.807e-17
Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = -1
Query:  250 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 666
            KLRP+F +  GTVTA N++ ++DGA+A++L+S  +   LG Q I  I  YA  A    +     P+ A P A+  AG+E   +   E++EAFA   LAN ++                   ++  K NV GG++A GHP   +G R++  +   L++
Sbjct:  255 KLRPAFDKQHGTVTAANSTPLTDGASAIILMSEGRAKALGYQPIGYIKSYAFSAIDVWQDMLMGPSYATPLALKRAGMELEDLTLIEMHEAFAAQTLANMQMFASKKFAEEKLGRNRAIGEIDMSKFNVLGGSLAYGHPFAATGTRLITQVCRELKR 411          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADI_PHOLL (3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadI PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17
Identity = 55/181 (30.39%), Postives = 88/181 (48.62%), Query Frame = -1
Query:  178 KLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYA-DAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLG-----------------LNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVEL 666
            KLRP+F    GTVTA N++ ++DGAAA++L+       LG + +  +  YA  A    +     P+ A P A+  AG+    +   +++EAFA   LAN K+                   ++ DK NV GG++A GHP   +GAR++  +L  LR+                 +A+V+E+
Sbjct:  255 KLRPAFDRKYGTVTAANSTPLTDGAAAVILMRESVAKALGTKPLGYLRSYAFSAIDVWQDMLLGPSYATPIALDRAGITLKDLTLIDMHEAFAAQTLANLKMFASDEFARNKLGRAQAIGEVDMDKFNVLGGSIAYGHPFAATGARMVTQVLNELRRRGGGLGLTTACAAGGLGTAMVLEV 435          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAHJ (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus haemolyticus (strain JCSC1435) GN=vraB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.069e-16
Identity = 60/196 (30.61%), Postives = 89/196 (45.41%), Query Frame = -1
Query:  259 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGV 843
            R +QD FA  S        + G    EIVP+ +         + D+DE L      A+L +LRP      GTVT GN+   +DGA   +++  E  + +G++              P +    P  A+ + +    L    +   E+NEAF+   LA+   L L  DKVN  GGA+A GHP   SGA ++  LL +
Sbjct:  167 RNDQDLFAARSHRLVATHFNNGDINREIVPLTIKGA------LFDRDESLKPNLTEARLHRLRPILPN--GTVTVGNSCMKNDGAGIALIMEKEMAVAMGIKWGMLYRDAVTTGVDPTLLGIGPVPAVSQLLKRQKLNIEDISAIELNEAFSSQVLASINELHLGLDKVNQWGGAIATGHPYSASGAALVARLLNL 354          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAW (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MW2) GN=vraB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1
Query:  268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843
            RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+   +DGA  L+++  +   +LG +                     P  AI   +    L    ++  EINEAF+   +A Q+ L ++  ++N+ GGA+A GHP G SGA+++  L
Sbjct:  167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAS (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain MSSA476) GN=vraB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1
Query:  268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843
            RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+   +DGA  L+++  +   +LG +                     P  AI   +    L    ++  EINEAF+   +A Q+ L ++  ++N+ GGA+A GHP G SGA+++  L
Sbjct:  167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAN (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain N315) GN=vraB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1
Query:  268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843
            RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+   +DGA  L+++  +   +LG +                     P  AI   +    L    ++  EINEAF+   +A Q+ L ++  ++N+ GGA+A GHP G SGA+++  L
Sbjct:  167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: VRAB_STAAM (Putative acetyl-CoA C-acetyltransferase vraB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=vraB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15
Identity = 58/193 (30.05%), Postives = 89/193 (46.11%), Query Frame = -1
Query:  268 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTL 843
            RE QD+FA  S +        G  + EI+P+ V         I + DE L    P     + +P  K  GGTVTA N+   +DGA  L+++  +   +LG +                     P  AI   +    L    ++  EINEAF+   +A Q+ L ++  ++N+ GGA+A GHP G SGA+++  L
Sbjct:  167 RELQDEFAYRSHQLTAENVKNGNISQEILPITVKG------EIFNTDESLKSHIPKDNFGRFKPVIK--GGTVTAANSCMKNDGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENIEVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRL 351          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADI_SHEB93.681e-1730.393-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB53.681e-1730.393-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB23.681e-1730.393-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_SHEB84.807e-1733.123-ketoacyl-CoA thiolase OS=Shewanella baltica (str... [more]
FADI_PHOLL8.199e-1730.393-ketoacyl-CoA thiolase OS=Photorhabdus luminescen... [more]
VRAB_STAHJ4.069e-1630.61Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAW7.674e-1530.05Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAS7.674e-1530.05Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAN7.674e-1530.05Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]
VRAB_STAAM7.674e-1530.05Putative acetyl-CoA C-acetyltransferase vraB OS=St... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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