CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIL_MYCLE (Probable acetyl-CoA acetyltransferase OS=Mycobacterium leprae GN=fadA4 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.997e-35
Identity = 86/189 (45.50%), Postives = 120/189 (63.49%), Query Frame = -1
Query:  280 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARI 843
            R+ QD+FA  S ++  AA   G FA E+VPV +   +G  S    +DEG+     A+ L  L+P+F+  GGT+T G+AS ISDGAA +V+++ EK  +LGL  + +I  +   A       + PA AI KA+   G+   Q+D  EINEAFA VALA+ + LG+ P+ VNV+GGA+A+GHPLG SGARI
Sbjct:  172 RQEQDEFAARSHQKAAAAWKDGVFADEVVPVSIPQSKGD-SLQFTEDEGIRANTSAESLAGLKPAFR-CGGTITPGSASQISDGAATVVVMNKEKAQQLGLTWLVEIGAHGVVAGPDSTLQSQPANAIKKAVDREGISVEQLDVVEINEAFAAVALASARELGIAPELVNVNGGAIAVGHPLGMSGARI 358          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIL_RALEH (Acetyl-CoA acetyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.487e-34
Identity = 87/198 (43.94%), Postives = 119/198 (60.10%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD+FAV S  +  AAQ AG F  EIVPV +   +G P      +          +  L+P+F +  GTVTA NAS ++DGAAA+V++S  K  +LGL  +A I  YA+A   P++    P  A  +A+S A      +D  EINEAFA  ALA  + +G +  KVNV+GGA+A+GHP+G SG RILVTLL  +++
Sbjct:  172 REAQDEFAVGSQNKAEAAQKAGKFDEEIVPVLIPQRKGDPVAFKTDEFVRQGATLDSMSGLKPAF-DKAGTVTAANASGLNDGAAAVVVMSAAKAKELGLTPLATIKSYANAGVDPKVMGMGPVPASKRALSRAEWTPQDLDLMEINEAFAAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMKR 368          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.537e-34
Identity = 87/204 (42.65%), Postives = 123/204 (60.29%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVS-----AGRGKPSTIVDKDEGLGKFDP-AKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R+ QD  AV S  +  AA  AG F  EI+PV+        G  KP T V  D+G+      A L KL+P FK++G T TAGN+S +SDGA A++L+     ++ GL V+     +A     P +    PA+AIP A+  AGLE   +D +EINEAFA   +  +  LGL+P+K+NV+GGA+A+GHPLG +GAR + TLL  +++
Sbjct:  211 RQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPIT-VSVDDGIRPTTTLASLGKLKPVFKKDG-TTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKR 412          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_VIBVU (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fadA PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.314e-34
Identity = 90/200 (45.00%), Postives = 120/200 (60.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE +      + L +LRP F    GTVTAG +S++SDGA+A++++S EK  +LG+ + A+I G A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDEFAARSHARAHAATMEGRFKNEILPTEGHAADGTLFTL-DHDEVIRPETTVEGLSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQSLPCAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.314e-34
Identity = 95/225 (42.22%), Postives = 121/225 (53.78%), Query Frame = -1
Query:  175 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVELV 843
            RE+QD FA  S +R  AAQ  G FA EIVPV +   +G+P  I   +          L KL+   K  G +VTAGNAS I+DGAAA+++ S E V +  L+  AKI         P +   APA AI K +  A L   Q+D  E+NEAFA  ALA  + LGL  D  +VN +GGA+ALGHPLG SGAR++ T L  L Q                  AL++E V
Sbjct:  178 REDQDQFAYTSQQRTAAAQAKGYFAKEIVPVTIPQRKGEPVVIATDEHPRASTTLEGLAKLKGVVKPEG-SVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQLEQSGGKYALCSMCIGVGQGIALIIERV 401          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.328e-34
Identity = 90/200 (45.00%), Postives = 120/200 (60.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE +      + L +LRP F    GTVTAG +S++SDGA+A++++S EK  +LG+ + A+I G A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  162 REQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DHDEVIRPETTVEGLSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGVTIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLSIEDMDVIELNEAFAAQSLPCAKDLGLLDVMDEKVNLNGGAIALGHPLGCSGARISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.382e-34
Identity = 86/202 (42.57%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA---GRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R+ QD FA  S+E+  AAQ AG F  EI+P++ +       +    V+KD+G+     A KL KL+P+F   G T  AGNAS ISDGA A++L+      KLG  ++AK          PE+    PA AIP  + + GL  + VD +EINEAFA  AL + +  G++  KVN  GGA+A+GHPLG +GAR   TLL  L++
Sbjct:  189 RKAQDAFAAKSYEKAAAAQAAGKFDQEILPIKTTVLDDDDNEKEVTVNKDDGIRPGVTAEKLGKLKPAFSAEG-TTHAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPAVLEDLGLTVNDVDVFEINEAFASQALFSIQHCGIDESKVNPRGGAIAIGHPLGATGARQFATLLSELKE 389          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.382e-34
Identity = 95/225 (42.22%), Postives = 121/225 (53.78%), Query Frame = -1
Query:  175 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVELV 843
            RE+QD FA  S +R  AAQ  G FA EIVPV +   +G+P  I   +          L KL+   K  G +VTAGNAS I+DGAAA+++ S E V +  L+  AKI         P +   APA AI K +  A L   Q+D  E+NEAFA  ALA  + LGL  D  +VN +GGA+ALGHPLG SGAR++ T L  L Q                  AL++E V
Sbjct:  178 REDQDQFAYTSQQRTAAAQAKGYFAKEIVPVTIPQRKGEPVVIDTDEHPRASTTLEGLAKLKGVVKPEG-SVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKIIASTTVGIEPRIMGFAPAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLADDDARVNPNGGAIALGHPLGASGARLVTTALNQLEQSGGKYALCSMCIGVGQGIALIIERV 401          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIK_YEAST (3-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomyces cerevisiae GN=FOX3 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.641e-34
Identity = 80/199 (40.20%), Postives = 119/199 (59.80%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R++QD+FA  S+++   A++ G F  EI+P+++  G     +I   DEG      A+ L  +RP+F ++ GT TAGNAS +SDG A ++L       +L L V+ +   +      PE+    PA AIPK +   GL+   +D +EINEAFA  AL     LG++ +KVN  GGA+ALGHPLGC+GAR + T+L  L++
Sbjct:  201 RKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDG-----SICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK 394          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_VIBPA (3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus GN=fadA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.641e-34
Identity = 90/200 (45.00%), Postives = 120/200 (60.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            RE QD+FA  S  R  AA   G F  EI+P E  A  G    + D DE +      + L +LRP F    GTVTAG +S++SDGA+A++++S EK  +LGL++ A+I G A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     +KVN++GGA+ALGHPLGCSGARI  TL+ ++
Sbjct:  166 REQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFQL-DYDEVIRPETTVEGLSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGLKIRARIKGMAIAGCDPSIMGYGPVPATQKALKRAGLAIEDMDVVELNEAFAAQSLPCAKDLGLLEVMDEKVNLNGGAIALGHPLGCSGARISTTLINLM 364          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THIL_MYCLE2.997e-3545.50Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]
THIL_RALEH1.487e-3443.94Acetyl-CoA acetyltransferase OS=Ralstonia eutropha... [more]
THIK2_ARATH2.537e-3442.653-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
FADA_VIBVU3.314e-3445.003-ketoacyl-CoA thiolase OS=Vibrio vulnificus GN=fa... [more]
CATF_ACIAD3.314e-3442.22Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
FADA_VIBVY4.328e-3445.003-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
THIK_YARLI7.382e-3442.573-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
PCAF_ACIAD7.382e-3442.22Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
THIK_YEAST9.641e-3440.203-ketoacyl-CoA thiolase, peroxisomal OS=Saccharomy... [more]
FADA_VIBPA9.641e-3445.003-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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