CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.641e-34
Identity = 87/206 (42.23%), Postives = 124/206 (60.19%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGR----GKPST---IVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE+QD FAV S +    A   G F  EIVPVEV+        KP     +  +DEG+     A  L  LRP+F  +G TVTAGN+S  SDGAAA++L+  EK   LGL  + K   +A     PE+    P  AIP+A+  AGL+   +  +E+NEAFA  A+   + LG++ +KVNV+GGA+ALGHPLGC+G ++ ++L+  +++
Sbjct:  162 REDQDAFAVRSHQNAAKALAEGKFKDEIVPVEVTVTEIGEDHKPMEKQFVFSQDEGVRPQTTADILSTLRPAFSVDG-TVTAGNSSQTSDGAAAVMLMDREKADALGLAPLVKFRSFAVGGVPPEVMGIGPVEAIPRALKLAGLQLQDIGLFELNEAFASQAIQVIRELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKR 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_SACD2 (3-ketoacyl-CoA thiolase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=fadA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.259e-33
Identity = 87/201 (43.28%), Postives = 116/201 (57.71%), Query Frame = -1
Query:  253 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQK---LLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLR 843
            RE  D+F   S  +   A + G FA EI+        G P T++  DE +      + L KL+P+F   GGTVTAG +S I+DGA++++++S  K  +LGL  IAKI   A A   P +    P  A  KA++NAGL    +D  E+NEAFA  AL   K   LL    DKVN++GGA+ALGHP GCSG RI  TLL V++
Sbjct:  166 REAMDEFGARSHRKAAEATEQGKFAREIIARIGHDETGAP-TLIKHDETIRPDTTVEALSKLKPAFNPKGGTVTAGTSSQITDGASSMLVMSAAKAAELGLTPIAKIRSMALAGVDPSIMGYGPVPATQKALANAGLSIEDIDVVELNEAFAAQALPVLKDLNLLDAMEDKVNLYGGAIALGHPFGCSGTRITGTLLSVMQ 365          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_HAHCH (3-ketoacyl-CoA thiolase OS=Hahella chejuensis (strain KCTC 2396) GN=fadA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.644e-33
Identity = 84/200 (42.00%), Postives = 120/200 (60.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVAL---ANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            R+ QD+F   S      A   G F  EI+ ++     G P+ +++ DE +     A+ L +LRP+F    GTVTAG +S ++DGA+A++L+S E+   LGL  +AKI   A A   P +    P  A  KA+  AGL+   +D +E+NEAFA  +L    + KL+G+   KVN++GGA+ALGHPLGCSGARI  TLL V+
Sbjct:  166 RQQQDEFGARSHRLAHEATLEGRFRNEIISIQGHDDDGFPA-LIENDETIRPETTAESLAQLRPAFDPKSGTVTAGQSSQLTDGASAMLLMSAERAQALGLTPMAKIRSMATAGCDPAIMGYGPVPATKKALKRAGLKVEDIDFWELNEAFAAQSLPVIKDLKLMGVVDQKVNLNGGAIALGHPLGCSGARISTTLLNVM 364          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.805e-33
Identity = 84/194 (43.30%), Postives = 119/194 (61.34%), Query Frame = -1
Query:  265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 843
            RE QD FA  S ++  AA  +G FA EI+PV +   +G P  + D DE       A+ L +LRP+F + G TVTAGNAS I+DGAA +V++   K  +LGL  +A++  ++ A   P +  T P  A    +  AG   + +D  E NEAFA  A++  + +G +  KVNV+GGA+A+GHP+G SGAR+LVTLL
Sbjct:  173 REAQDAFAAASQQKAEAAIQSGRFADEIIPVSIPQRKGDP-LVFDTDEFPRPGTTAETLGRLRPAFDKQG-TVTAGNASGINDGAAMVVVMKESKAKELGLTPMARLVAFSSAGVDPAIMGTGPIPASTDCLKKAGWAPADLDLVEANEAFAAQAMSVNQEMGWDLSKVNVNGGAIAIGHPIGASGARVLVTLL 364          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIL_ZOORA (Acetyl-CoA acetyltransferase OS=Zoogloea ramigera GN=phbA PE=1 SV=4)

HSP 1 Score: 141.739 bits (356), Expect = 4.785e-33
Identity = 88/194 (45.36%), Postives = 115/194 (59.28%), Query Frame = -1
Query:  265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA-KLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 843
            R+ QD FAV S  +  AAQ  G F  EIVP  V   +G     VD DE +        + KLRP+F + G TVTAGNAS ++DGAAA +L+S  +  + G+Q + +I  +A     P++  T P  A  KA+  AG +   +D  E NEAFA  A A  K LG +P  VNV+GGA+A+GHP+G SGARIL TLL
Sbjct:  172 RDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKG--DITVDADEYIRHGATLDSMAKLRPAFDKEG-TVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVDPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLL 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.785e-33
Identity = 93/203 (45.81%), Postives = 123/203 (60.59%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGG--TVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R +QD FA+ S ++  AAQ AG FA EIVPV ++  +G+  TIV++DE L      + L KL+P    NG   TVTAGNAS ++DGAAAL+L S E V K GL   A++ G A    AP +    P  A+ K     G+  S  D  E+NEAFA   LA  + LG+  D  +VN +GGA+ALGHPLG SGAR+++T L  L +
Sbjct:  178 RADQDAFALRSQQKAAAAQAAGFFAEEIVPVRIAHKKGE--TIVERDEHLRPETTLEALTKLKPV---NGPDKTVTAGNASGVNDGAAALILASAEAVKKHGLTPRARVLGMASGGVAPRVMGIGPVPAVRKLTERLGVAVSDFDVIELNEAFASQGLAVLRELGVADDAPQVNPNGGAIALGHPLGMSGARLVLTALHQLEK 375          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.785e-33
Identity = 88/202 (43.56%), Postives = 119/202 (58.91%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLN---PDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S +R  AA + G F  EIV VE     G    ++D+DE + +  +   + KL+P F   GGTVTAG +S++S GA+AL ++S E+   LGL+ +A++     A     +    P  A  KA+ +AGL    +   E+NEAFA  ++   K LGL     D VN+HGGA+ALGHPLGCSGARI  TLL V+RQ
Sbjct:  166 REEQDAFGVRSHQRAQAANENGYFDNEIVGVEGHDADGF-LRLIDRDEVIRQDANLEDMGKLKPVFDPKGGTVTAGTSSALSVGASALAVMSYERAQALGLEPLARVVSTGVAGCDASIMGYGPVPATQKALKSAGLAIDDIQTVELNEAFAAQSIPVLKDLGLRERMDDAVNLHGGAIALGHPLGCSGARICTTLLNVMRQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.249e-33
Identity = 86/198 (43.43%), Postives = 119/198 (60.10%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE  D +A+ S +R  AA DAG F  E+ P+EV   +GK +  VD +    +    +L+KL P FK++G TVTAGNAS I+DGA A+++ S + V K     +A+I GY  +   P +    P  AI  A+  AGL    +D  E+NEAFA   LA ++ L L+  K NV+GGA+ALGHPLG SG+RI   L+  LR+
Sbjct:  176 REECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQKLPPVFKKDG-TVTAGNASGIADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRR 371          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIM_HUMAN (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 85/198 (42.93%), Postives = 119/198 (60.10%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE  D +A+ S +R  AA DAG F  E+ P+EV   +GK +  VD +    +    +L+KL P FK++G TVTAGNAS ++DGA A+++ S + V K     +A+I GY  +   P +    P  AI  A+  AGL    +D  E+NEAFA   LA ++ L L+  K NV+GGA+ALGHPLG SG+RI   L+  LR+
Sbjct:  176 REECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQKLPPVFKKDG-TVTAGNASGVADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRR 371          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 86/198 (43.43%), Postives = 116/198 (58.59%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE+ D +A+ S +R   A DAG F  E+ PVEV   +GK +  VD +    +    +L KL P FK+ G TVTAGNAS +SDGA A+++ S + V K     +A+I GY  +   P +    P  AI  A+   GL    +D  E+NEAFA   LA +K L L+P K NV+GGA+ALGHPL  SG+RI   L+  LR+
Sbjct:  176 REDCDRYALQSQQRWKTANDAGYFDNEMAPVEVKTRKGKQTMQVD-EHPRPQTTMEQLNKLPPVFKKEG-TVTAGNASGVSDGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPTIMGIGPVPAISGALKKTGLSLKDMDLVEVNEAFAPQYLAVEKSLNLDPSKTNVNGGAIALGHPLAGSGSRITAHLVHELRR 371          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_BACSU9.641e-3442.233-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]
FADA_SACD21.259e-3343.283-ketoacyl-CoA thiolase OS=Saccharophagus degradan... [more]
FADA_HAHCH1.644e-3342.003-ketoacyl-CoA thiolase OS=Hahella chejuensis (str... [more]
THIL_THIVI2.805e-3343.30Acetyl-CoA acetyltransferase OS=Thiocystis violace... [more]
THIL_ZOORA4.785e-3345.36Acetyl-CoA acetyltransferase OS=Zoogloea ramigera ... [more]
PCAF_PSEPU4.785e-3345.81Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida... [more]
FADA_CHRSD4.785e-3343.563-ketoacyl-CoA thiolase OS=Chromohalobacter salexi... [more]
THIM_PONAB6.249e-3343.433-ketoacyl-CoA thiolase, mitochondrial OS=Pongo ab... [more]
THIM_HUMAN8.162e-3342.933-ketoacyl-CoA thiolase, mitochondrial OS=Homo sap... [more]
THIM_BOVIN8.162e-3343.433-ketoacyl-CoA thiolase, mitochondrial OS=Bos taur... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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