CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 89/200 (44.50%), Postives = 118/200 (59.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            R+ QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE +  +   A L +LRP F    GTVTAG +S++SDGA+A++++S +K   LGL + A+I   A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     DKVN++GGA+ALGHPLGCSG RI  TL+ ++
Sbjct:  162 RQQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DYDEVIRPETTVAGLAELRPVFDPANGTVTAGTSSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALQRAGLTMQDMDVVELNEAFAAQSLPCAKDLGLLEMMDDKVNLNGGAIALGHPLGCSGTRISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 8.162e-33
Identity = 89/200 (44.50%), Postives = 118/200 (59.00%), Query Frame = -1
Query:  256 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVL 843
            R+ QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE +  +   A L +LRP F    GTVTAG +S++SDGA+A++++S +K   LGL + A+I   A A   P +    P  A  KA+  AGL    +D  E+NEAFA  +L   K LGL     DKVN++GGA+ALGHPLGCSG RI  TL+ ++
Sbjct:  162 RQQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DYDEVIRPETTVAGLAELRPVFDPANGTVTAGTSSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALKRAGLTMQDMDVVELNEAFAAQSLPCAKDLGLLDMMDDKVNLNGGAIALGHPLGCSGTRISTTLINLM 360          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.066e-32
Identity = 89/202 (44.06%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFA---VVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE+QD FAV S      A   G F  EIV +E     G    +V+ DE +  +     L KL P F    GTVTAG +S++SDGA+A++++S +K  +LGL  IAK+   A A   P +    P  A  KA+  AGL  + +D  E+NEAFA   +  L +  LL L  DKVN++GGA+ALGHPLGCSG RI  TLL V+R+
Sbjct:  166 REDQDAFAVRSHRLAHEATLQGRFNNEIVSIEGHDADGN-KILVEVDEVIRPETSMESLAKLAPVFMPKVGTVTAGTSSALSDGASAMLMMSAKKAEELGLTPIAKVRSMAVAGCDPAIMGYGPVPATKKALKRAGLTIADIDIVELNEAFAAQSIPVLKDLGLLDLVDDKVNLNGGAIALGHPLGCSGTRISTTLLNVMRE 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIM_MOUSE (3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.392e-32
Identity = 84/198 (42.42%), Postives = 119/198 (60.10%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE+ D +A+ S +R  AA +AG F  E+ P+EV   +GK +  VD +    +    +L+KL   FK++G TVTAGNAS +SDGA A+++ S + V K     +A++ GY  +   P +    P  AI  A+  AGL    +D  ++NEAFA   L+ QK L L+P K NV GGA+ALGHPLG SG+RI   L+  LR+
Sbjct:  176 REDCDRYALQSQQRWKAANEAGYFNEEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQKLPSVFKKDG-TVTAGNASGVSDGAGAVIIASEDAVKKHNFTPLARVVGYFVSGCDPTIMGIGPVPAINGALKKAGLSLKDMDLIDVNEAFAPQFLSVQKALDLDPSKTNVSGGAIALGHPLGGSGSRITAHLVHELRR 371          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.392e-32
Identity = 85/203 (41.87%), Postives = 120/203 (59.11%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA----GRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD  AV S +R  AA  +G    EI+PV         + + + +V  D+G+    + A L KL+  FK+NG T TAGNAS ISDGA A++L+     +K GL ++     +A     P +    PA+AIP A   AGL  S +D +EINEAFA   + + K L L+ +KVNV+GGA+A+GHPLG +GAR + TLL  +++
Sbjct:  212 REEQDMAAVESHKRAAAAIASGKLKDEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGST-TAGNASQISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKR 413          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.392e-32
Identity = 82/203 (40.39%), Postives = 119/203 (58.62%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVS-----AGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD  AV S  +  +A  +G F  EI PV+        G  KP T+   D        + L KL+P FKE+G T TAGN+S +SDGA A++L+     ++ GL ++     ++     P +    PA+AIP A+  AGLE + VD +EINEAFA   +  +  LGL+ +K+NV+GGA+A+GHPLG +GAR + TLL  +++
Sbjct:  203 REEQDQAAVDSHRKAASATASGKFKDEITPVKTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDG-TTTAGNSSQLSDGAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKR 404          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.818e-32
Identity = 84/198 (42.42%), Postives = 117/198 (59.09%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE+ D +A+ S +R  AA +AG F  E+ P+EV   +GK +  VD +    +    +L+ L P FK+ G TVTAGNAS +SDGA  +++ S + V K     +A++ GY  +   P +    P  AI  A+  AGL    +D  ++NEAFA   LA QK L L+P K NV GGA+ALGHPLG SG+RI   L+  LR+
Sbjct:  176 REDCDRYALQSQQRWKAANEAGYFNEEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQNLPPVFKKEG-TVTAGNASGMSDGAGVVIIASEDAVKKHNFTPLARVVGYFVSGCDPAIMGIGPVPAITGALKKAGLSLKDMDLIDVNEAFAPQFLAVQKSLDLDPSKTNVSGGAIALGHPLGGSGSRITAHLVHELRR 371          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEPU (3-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=fadA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.375e-32
Identity = 84/202 (41.58%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S +    A   G F  EI+P++     G    + D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++SG++ + LG+Q +A I   A A   P +    P  +  KA+  AGL  + +D  E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDLFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLK-VFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEPF (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=fadA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.375e-32
Identity = 85/202 (42.08%), Postives = 117/202 (57.92%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S +    A   G F  EI+P++     G   T  D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A I   A A   P +    P  A  KA+  AGL  + +D +E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDAFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKTF-DYDETIRPETTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLGINDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEE4 (3-ketoacyl-CoA thiolase OS=Pseudomonas entomophila (strain L48) GN=fadA PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.375e-32
Identity = 84/202 (41.58%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F V S +    A   G F  EI+P++     G    + D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++SG++ + LG+Q +A I   A A   P +    P  +  KA+  AGL  + +D  E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDLFGVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLK-VFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
FADA_VIBCH8.162e-3344.503-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA... [more]
FADA_VIBC38.162e-3344.503-ketoacyl-CoA thiolase OS=Vibrio cholerae serotyp... [more]
FADA_MARMS1.066e-3244.063-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain... [more]
THIM_MOUSE1.392e-3242.423-ketoacyl-CoA thiolase, mitochondrial OS=Mus musc... [more]
THIK5_ARATH1.392e-3241.873-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
THIK1_ARATH1.392e-3240.393-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
THIM_RAT1.818e-3242.423-ketoacyl-CoA thiolase, mitochondrial OS=Rattus n... [more]
FADA_PSEPU2.375e-3241.583-ketoacyl-CoA thiolase OS=Pseudomonas putida GN=f... [more]
FADA_PSEPF2.375e-3242.083-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens... [more]
FADA_PSEE42.375e-3241.583-ketoacyl-CoA thiolase OS=Pseudomonas entomophila... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
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