CX043431

Overview
NameCX043431
Unique NameCX043431
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: YQEF_ECOLI (Probable acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=yqeF PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 86/194 (44.33%), Postives = 124/194 (63.92%), Query Frame = -1
Query:  265 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLL 843
            R+ QD +A+ S ++  AA DAG F  EIVPV ++   G+ + +VD DE       A+ L +L PSF ++ G+VTAGNASSI+DGAAA++++S  K   L L V+A+I  +A     P +   AP  A  + +   G + ++VD  E NEAFA  AL+  K+L  +  +VNV+GGA+ALGHP+G SG RILV+L+
Sbjct:  172 RQLQDAYALSSQQKARAAIDAGRFKDEIVPV-MTQSNGQ-TLVVDTDEQPRTDASAEGLARLNPSF-DSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIRAFASVGVDPALMGIAPVYATRRCLERVGWQLAEVDLIEANEAFAAQALSVGKMLEWDERRVNVNGGAIALGHPIGASGCRILVSLV 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 85/202 (42.08%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  253 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPST----IVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLR 843
            RE QD+FA  S+ +   A  AGAF  EI+P+  S  R    T    IVD DEG  +   A+ L KLRP+F    GT TAGNAS +SDGAAA++L+        G  +I K    + A   PE+    PA AIP+ +   GL    +D +EINEAFA   L + + + +  +K+N++GGA+ALGHPLG +GAR   T++ +L+
Sbjct:  187 RERQDEFAAKSYNKAAKAVAAGAFKSEILPIR-SIIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAFD---GTTTAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAYAIPEVLKRTGLTVDDIDVFEINEAFAAQCLYSAEQVNVPEEKLNINGGAIALGHPLGETGARQYATIIPLLK 384          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 95/228 (41.67%), Postives = 125/228 (54.82%), Query Frame = -1
Query:  175 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGG--TVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPD--KVNVHGGAVALGHPLGCSGARILVTLLGVLRQXXXXXXXXXXXXXXXGASALVVELV 843
            R +QD FA+ S +    AQ AG FA EIVPV +   +G+  T+VD DE L      + L KL+P    NG   TVTAGNAS ++DG+ AL+L S E V K GL+  AK+ G A A  AP +    P  A+ K +    L  +  D  E+NEAFA   LA  + LG+  D  +VN +GGA+ALGHPLG SGAR+++T +  L +                  AL VE V
Sbjct:  179 RADQDAFALRSQQLAGRAQAAGYFAEEIVPVVIKGKKGE--TVVDADEHLRPDTTLEALAKLKPV---NGPDKTVTAGNASGVNDGSVALILASAEAVKKHGLKARAKVLGMASAGVAPRVMGIGPVPAVRKLLERLNLSVADFDVIELNEAFAAQGLAVTRELGIADDDARVNPNGGAIALGHPLGASGARLVLTAVHQLEKSGGQRGLCTMCVGVGQGVALAVERV 401          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.101e-32
Identity = 86/202 (42.57%), Postives = 117/202 (57.92%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD FAV S +    A   G F  EI+P++     G    I D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LGL+ +A I   A A   P +    P  A  KA+  AGL  + +D  E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLK-IFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSESM (3-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv. tomato GN=fadA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.051e-32
Identity = 84/202 (41.58%), Postives = 117/202 (57.92%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F + S +    A   G F  EI+P++     G    + D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ ++++S ++   LG+Q +A I   A A   P +    P  A  KA+  AGL  S +D +E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGF-LRVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSISDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_PSEOL (3-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans GN=fadA PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.051e-32
Identity = 84/202 (41.58%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVA---LANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            RE QD F + S +    A   G F  EI+P++     G    + D DE +      + L  L+P+F   GGTVTAG +S I+DGA+ +V++SG++ + LG+Q +A I   A A   P +    P  +  KA+  AGL  + +D  E+NEAFA  A   L + K+L    +KVN+HGGA+ALGHP GCSGARI  TLL V++Q
Sbjct:  166 REQQDLFGLRSHQLAHKATVEGKFKDEIIPMQGYDENGFLK-VFDFDETIRPETTLEGLASLKPAFNPKGGTVTAGTSSQITDGASCMVVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVPSTQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQ 366          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.290e-32
Identity = 84/202 (41.58%), Postives = 118/202 (58.42%), Query Frame = -1
Query:  253 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPST----IVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLR 843
            RE QD+FA  S+ +   A  +GAF  EI+P+  S  R    T    IVD DEG  +   A+ L KLRP+F    GT TAGNAS +SDGAAA++L+        G  +I K    + A   PE+    PA AIP+ +   GL    +D +EINEAFA   L + + + +  +K+N++GGA+ALGHPLG +GAR   T++ +L+
Sbjct:  187 RERQDEFAAKSYNKAAKAVASGAFKSEILPIR-SIIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAFD---GTTTAGNASQVSDGAAAVLLMKRSLAEAKGYPIIGKYVLCSTAGVPPEIMGVGPAFAIPEVLKRTGLTVDDIDVFEINEAFAAQCLYSAEQVNVPEEKLNINGGAIALGHPLGETGARQYATIIPLLK 384          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.290e-32
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R++QD+FA  S +R  AA  AG FA EIV        G      D DE +  + + + L  LRP+F    GTVTAG +S++SDGA+A++++S  +   LGL   A+I   A     P +    P  A   A+  AGLE + +  +E+NEAFA  +LA  K LGL     DKVN++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 RQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRF-DFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.290e-32
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R++QD+FA  S +R  AA  AG FA EIV        G      D DE +  + + + L  LRP+F    GTVTAG +S++SDGA+A++++S  +   LGL   A+I   A     P +    P  A   A+  AGLE + +  +E+NEAFA  +LA  K LGL     DKVN++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 RQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRF-DFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362          
BLAST of CX043431 vs. ExPASy Swiss-Prot
Match: FADA_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadA PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.290e-32
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = -1
Query:  250 RENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLG-KFDPAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGL---NPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 843
            R++QD+FA  S +R  AA  AG FA EIV        G      D DE +  + + + L  LRP+F    GTVTAG +S++SDGA+A++++S  +   LGL   A+I   A     P +    P  A   A+  AGLE + +  +E+NEAFA  +LA  K LGL     DKVN++GGA+ALGHPLGCSGARI  TLL ++ +
Sbjct:  162 RQSQDEFAFRSHQRAYAATQAGHFAKEIVATNGHDAEGVLKRF-DFDEVIRPETNLSGLAALRPAFDPVNGTVTAGTSSALSDGASAMLIMSESRAKSLGLTPRARIRSMAVVGCDPSIMGYGPVPASQLALKRAGLELADIGLFELNEAFAAQSLACLKGLGLLESMDDKVNLNGGAIALGHPLGCSGARISTTLLNLMER 362          
The following BLAST results are available for this feature:
BLAST of CX043431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
YQEF_ECOLI3.101e-3244.33Probable acetyl-CoA acetyltransferase OS=Escherich... [more]
THIKA_CANTR3.101e-3242.083-ketoacyl-CoA thiolase A, peroxisomal OS=Candida ... [more]
PCAF_PSESB3.101e-3241.67Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (s... [more]
FADA_PSEFR3.101e-3242.573-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fa... [more]
FADA_PSESM4.051e-3241.583-ketoacyl-CoA thiolase OS=Pseudomonas syringae pv... [more]
FADA_PSEOL4.051e-3241.583-ketoacyl-CoA thiolase OS=Pseudomonas oleovorans ... [more]
THIKB_CANTR5.290e-3241.583-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]
FADA_YERPS5.290e-3243.073-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADA_YERPP5.290e-3243.073-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADA_YERPN5.290e-3243.073-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043431 ID=CX043431; Name=CX043431; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTGAGAGCAAAGCCAGAAAATTATTATCTTTTTATTGAAG
ACGAAAGCACATATGAAAAAGAAACGGAGATACAATTGCACAACACCCCA
CCCTAATGGGCCATAATTATACTCCACAAGAAGGGTGCAACCTCGTTGAT
AATAATCCGAACAGAAAAGGCTTACACAAGCTCTACAACAAGTGCCGATG
CACCTCCTCCTCCGTTGCAAACGCCACCAACACCGTATTTCCCGTTTTTC
TGCCTAAGTACCCCCAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCC
CAGAGGATGTCCCAAAGCTACTGCTCCACCATGGACATTAACCTTGTCAG
GATTTAGTCCAAGCAATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCC
TCATTTATTTCGTAACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGA
AATGGCTTTAGGTATGGCTAGGGCTGGAGCTGTCGTAAACATCTCTGGTG
CCTGAGCAGCATCAGCATATCCTGTGATCTTGGCGATCACTTGCAAACCC
AGCTTAAGTACCTTCTCTCCACTGACTAGAACTAATGCTGCAGCTCCATC
ACTTATACTAGAGGCATTGCCAGCCGTAACAGTTCCTCCATTCTCCTTGA
AACTTGGTCGAAGCTTCCTCAATTTTGCCGGGTCAAACTTGCCTAAACCT
TCATCCTTATCAACAATGGTTGATGGTTTTCCCCTTCCCGCAGAAACTTC
AACTGGAACAATTTCCCATGCAAAGGCACCAGCATCTTGGGCAGCAATAC
CACGCTCAAAGCTCAGAACAGCAAAGTCATCCTGATTCTCCCT
back to top