CX043421

Overview
NameCX043421
Unique NameCX043421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_CYAME (Cell division protease ftsH homolog OS=Cyanidioschyzon merolae GN=ftsH PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.076e-50
Identity = 101/199 (50.75%), Postives = 135/199 (67.84%), Query Frame = -1
Query:  212 DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 808
            DGK K L+AYHE GHA+  TL P H PVQKVTL+PR QA+GLTWF+  ++  L+SK QL + I+  LGGRAAEE +FG  EVTTGA+ DLQQ+T LA+QMVT FGMS +GP  L  G++   +   M     +SE++   IDA V+ + +  YE  L  ++ NR  +D+IVE L+EKET+ G EFR ++S+   + A N
Sbjct:  405 DGKIKRLIAYHETGHALTATLLPNHPPVQKVTLIPRRQAKGLTWFMQDNERDLLSKSQLMSMIMVALGGRAAEEAVFGNAEVTTGASNDLQQVTNLARQMVTRFGMSSLGPLCLETGNEEIFLGRDMRLMPEVSEEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQLVSQAARLTAVN 603          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.316e-48
Identity = 92/195 (47.18%), Postives = 132/195 (67.69%), Query Frame = -1
Query:  230 MTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFV 814
            + D + K L+AYHE GHA+  T  P HDPVQKVTL+PR QA+GLTWF+P+DD  L+SK Q+ ++I+  L GRA EE++FG PEVT GAA D++Q+T +A+QMVT FGMS++GP  L + S    +   +M R+ +SE++   +D  V+ +    Y  A + +  NR+ ID++V  L+EKET+   EF  I+ E V
Sbjct:  420 LADSRIKRLIAYHEAGHAVAATFLPHHDPVQKVTLIPRRQAKGLTWFLPNDDQFLVSKSQILSKIIAALAGRAMEEIVFGLPEVTIGAANDIKQVTFMARQMVTKFGMSKVGPICLENSSSEVFIGRDLMGRHELSEEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRIVEERV 614          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH2_SYNY3 (Cell division protease ftsH homolog 2 OS=Synechocystis sp. (strain PCC 6803) GN=slr1390 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.455e-47
Identity = 94/194 (48.45%), Postives = 131/194 (67.53%), Query Frame = -1
Query:  233 MTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEF 814
            + D KSK L+AYHEVGHA+ GTL PGHDPV+KVTL+PRGQA+GLTWF P +D +L+++ Q+ ARI G LGGR AEEVIFG  EVTTGA  D+++IT LA+QMVT  GMS +G  +L +             R+  SE +A  ID  ++ +   A++ A   I  NR  +D +V+ L+++ET+ G+ FR ++  +
Sbjct:  460 LVDSKSKRLIAYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQGLTWFTPDEDQSLMTRNQMIARIAGLLGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMVTKLGMSSLGLVALEEEGDRNFSGGDWGKRSEYSEDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQLVESY 653          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH4_SYNY3 (Cell division protease ftsH homolog 4 OS=Synechocystis sp. (strain PCC 6803) GN=slr1604 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.470e-41
Identity = 91/194 (46.91%), Postives = 130/194 (67.01%), Query Frame = -1
Query:  239 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDD---PTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIM--RMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 802
            K K+LVAYHE GHA+ G L P +DPVQK++++PRG+A GLTWF PS+D     L S+  L  ++   LGGR AEE+IFG  EVTTGA+ DLQQ+  +A+QMVT FGMS+ +GP +L  G Q G V +   + +    S++ A  ID  V +L D+AY+ A   +  NR  +D++ E+L+EKET+  +E + +L+
Sbjct:  415 KRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSRSYLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVAL--GRQGGGVFLGRDIASDRDFSDETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLA 606          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH1_ARATH (Cell division protease ftsH homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.844e-34
Identity = 84/202 (41.58%), Postives = 128/202 (63.37%), Query Frame = -1
Query:  215 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIM--RMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAE 802
            + K LVAYHE GHA+ G L P +DPV K++++PRGQA GLT+F PS+   +  L S+  L  ++   LGGR AEEVIFG   VTTGA+ D  Q++ +A+QM+  FG S +IG  ++  G   G+  M  +M ++   S   A+ +DA V+ L ++AY+ A   I  + + + K+ ++L+EKET+ G+EF   +S F++  AE
Sbjct:  516 EKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAV--GGPGGNPFMGQQMSSQKDYSMATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEF---MSLFIDGQAE 712          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_TOBAC (Cell division protease ftsH homolog, chloroplastic OS=Nicotiana tabacum GN=FTSH PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 3.146e-34
Identity = 83/200 (41.50%), Postives = 124/200 (62.00%), Query Frame = -1
Query:  215 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAE 802
            + K LVAYHE GHA+ G L P +DPV K++++PRGQA GLT+F PS+   +  L S+  L  ++   LG R AEEVIFG   VTTGA+ D  Q++ +A+QMV   G S +IG  ++  G  +  +  +M  +   S   A+ +DA V+ L +RAYE A   I  + + + K+ ++L+EKET+ G+EF   +S F++  AE
Sbjct:  507 EKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYSMATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEF---MSLFIDGKAE 703          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.109e-34
Identity = 81/192 (42.19%), Postives = 125/192 (65.10%), Query Frame = -1
Query:  236 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEI-GPWSLMDGSQSGDVIMRM-MARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 802
            K K +VAYHEVGHA+ G + PG   V K+++VPRG A  G T  +P++D  L+++ +L  +I   LGGRAAEE++F    +TTGAA DLQ+ T LA+QMVTT+GMS++ GP +   G Q+  +   M   R  +S+  A++ID  VK + ++ +  AL+ + +NR+ ++ I E +LEKE + G+E   +L +
Sbjct:  430 KEKKIVAYHEVGHALVGAVMPGGGQVAKISIVPRGMAALGYTLQMPTEDRFLLNESELRDQIATLLGGRAAEEIVF--DSITTGAANDLQRATDLAEQMVTTYGMSKVLGPLAYDKGQQNNFLGQGMGNPRRMVSDDTAKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLGQ 619          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.154e-34
Identity = 83/200 (41.50%), Postives = 125/200 (62.50%), Query Frame = -1
Query:  215 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAE 802
            + K LVAYHE GHA+ G L P +DPV K++++PRGQA GLT+F PS+   +  L S+  L  ++   LGGR AEEV FG   VTTGA+ D  Q++ +A+QMV  FG S +IG  ++  G  +  +  +M ++   S   A+ +D  V+ L D+AYE A   I  + + + K+ ++L+EKET+ G+EF   +S F++  AE
Sbjct:  507 EKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEV-FGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYSMATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEF---MSLFIDGKAE 702          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH1_ORYSJ (Cell division protease ftsH homolog 1, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH1 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.154e-34
Identity = 83/202 (41.09%), Postives = 127/202 (62.87%), Query Frame = -1
Query:  215 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIM--RMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAE 802
            + + LVAYHE GHA+ G L P +DPV K++++PRGQA GLT+F PS+   +  L S+  L  ++   LGGR AEEVIFG   VTTGA+ D  Q++ +A+QMV  FG S +IG  ++  G   G+  +  +M ++   S   A+ +DA V+ L ++AY  A   I  + + + K+ ++L+EKET+ G+EF   +S F++  AE
Sbjct:  486 EKRRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAI--GGPGGNPFLGQQMSSQKDYSMATADVVDAEVRELVEKAYSRATQIITTHIDILHKLAQLLMEKETVDGEEF---MSLFIDGQAE 682          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH5_ARATH (Cell division protease ftsH homolog 5, chloroplastic OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.561e-33
Identity = 82/200 (41.00%), Postives = 123/200 (61.50%), Query Frame = -1
Query:  215 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSD---DPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAE 802
            + K LVAYHE GHA+ G L P +DPV K++++PRGQA GLT+F PS+   +  L S+  L  ++   LGGR AEEVIFG   VTTGA+ D  Q++ +A+QMV  FG S +IG  ++     +  +   M ++   S   A+ +DA V+ L ++AY  A   I    + + K+ ++L+EKET+ G+EF   +S F++  AE
Sbjct:  504 EKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYSMATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEF---MSLFIDGQAE 700          
The following BLAST results are available for this feature:
BLAST of CX043421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FTSH_CYAME1.076e-5050.75Cell division protease ftsH homolog OS=Cyanidiosch... [more]
FTSH_CYACA1.316e-4847.18Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH2_SYNY31.455e-4748.45Cell division protease ftsH homolog 2 OS=Synechocy... [more]
FTSH4_SYNY33.470e-4146.91Cell division protease ftsH homolog 4 OS=Synechocy... [more]
FTSH1_ARATH1.844e-3441.58Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH_TOBAC3.146e-3441.50Cell division protease ftsH homolog, chloroplastic... [more]
FTSH3_SYNY34.109e-3442.19Cell division protease ftsH homolog 3 OS=Synechocy... [more]
FTSH_MEDSA9.154e-3441.50Cell division protease ftsH homolog, chloroplastic... [more]
FTSH1_ORYSJ9.154e-3441.09Cell division protease ftsH homolog 1, chloroplast... [more]
FTSH5_ARATH1.561e-3341.00Cell division protease ftsH homolog 5, chloroplast... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10H12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10H12-P24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043421 ID=CX043421; Name=CX043421; organism=Citrus sinensis; type=EST; length=814bp
TGCTTCAAAAATCAGGAGCAAAACTTTAGAAATTTACTCAATCATGACTT
TTTGAGTTAGTGTACAATCCTACTTACATTTGATCAAGAATACAGAGTAT
TATACATTCAAGTGTATGCGTTCAAAGAGTGGCTGAAATTTCAAGTATGG
ATAATATTAATGCCACTCAAACAGATACAGATAATGGTGCTGGAACAGCT
GGAGGGACCCTATTTTCAGCTGGGATTTCGACAAACTCTGAGAGGATTGC
CCGGAATTCATCCCCTGACATTGTTTCCTTCTCAAGAAGAACTTCCACGA
TCTTGTCAATGGCTTCACGGTTGTTCCTTATTTGGCTCAACGCAATCTCA
TAGGCACGGTCTGATAGTCTCTTGACTGCAGCATCAATGTCTTCAGCAAG
CTTCTCAGACATTGAGTTCCTTGCCATCATTCTCATGATGACATCACCAC
TCTGTGATCCGTCCATGAGCGACCATGGGCCAATTTCAGACATTCCAAAT
GTGGTTACCATCTGTTTGGCCAAACCAGTGATCTGCTGCAAATCACCAGC
TGCTCCTGTTGTCACTTCAGGCCCTCCAAAAATCACTTCCTCAGCAGCTC
TACCACCGAGTCCACCAACAATTCTTGCAAAGAGCTGCTGCTTCGATATC
AAGGTGGGGTCATCTGAAGGGATGAACCAGGTAAGACCTCTTGCCTGACC
ACGTGGAACAAGGGTGACTTTTTGAACGGGATCGTGTCCAGGAGTCAAAG
TTCCGCATATTGCGTGGCCAACTTCATGGTATGCAACAAGACTTTTACTC
TTCCCATCTGTCAT
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