CX043421

Overview
NameCX043421
Unique NameCX043421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH1_HAEIN (Cell division protease ftsH homolog 1 OS=Haemophilus influenzae GN=ftsH-A PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.110e-30
Identity = 74/195 (37.95%), Postives = 122/195 (62.56%), Query Frame = -1
Query:  239 MTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIM-RMMAR-NSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 814
            MTD K K   AYHE GHAI G L P HDPV KVT++PRG+A G+T+F+P  D   IS++QL +++     GR AE++I+G   ++TGA+ D++  T +A+ MVT +G SE +GP  ++     G+V + R MA+   MS++ A  ID  V+ + +R Y  A   + +N + +  + + L++ ET+  ++ + +++
Sbjct:  402 MTD-KQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVTFFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGP--ILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQLMN 593          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.701e-30
Identity = 73/189 (38.62%), Postives = 112/189 (59.26%), Query Frame = -1
Query:  239 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 802
            K K L AYHE GHA+ G   P   P+ K T++PRG A G+   +P  D    +++Q+ + I   + GR AEE+IFG  +VT+GAA D++  T +A+ MVT  G+S+ IGP  +  GS S D+  R  + N +SE  A+ IDA VK++  + YE A   +  + + +  +   L+E ET+SG + + +LS
Sbjct:  409 KEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGKNKVTSGAASDIKGATNIARAMVTKAGLSDLIGP--IFHGSSSDDMYGRQQS-NEISEATAKLIDAEVKKIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLS 594          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.701e-30
Identity = 68/192 (35.42%), Postives = 115/192 (59.90%), Query Frame = -1
Query:  212 VAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAEN 787
            VAYHE GHA+ G    G + VQK+T++PRG A G     P ++    SK++L A I   +GGRAAE +I+G   ++TGA+ D+ + T +A++MVT +GMS +GP    + +++   + R  ++ +   K+A +ID  ++++   + EIA+  I  N E ++ I + LLE ET+  +E   I  + +++P  N
Sbjct:  471 VAYHEAGHAVVGLKVKGGNKVQKITIIPRGNAGGYNLMTPEEEKYNASKKELLATIASYMGGRAAEMIIYGKENISTGASDDISRATKIARKMVTEWGMSALGPIKYEEDTEN-PFLGRDYSKGTFGSKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEEIEYI-EKNMKLPPNN 660          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.140e-30
Identity = 74/189 (39.15%), Postives = 110/189 (58.20%), Query Frame = -1
Query:  239 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 802
            K K L AYHE GHA+ G   P   P+ K T++PRG A G+   +P  D    +++Q+ + I   + GR AEE+IFG  +VT+GA+ D++  T +A+ MVT  G+S+ IGP  +  GS SGD +      N  SE  AE IDA VKR+  + YE A   +  + + +  +   L+E ET+SG + + +LS
Sbjct:  409 KEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGP--IFHGS-SGDDMYGRQPNNETSEATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLS 594          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAI (Cell division protease ftsH OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ftsH PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 6.140e-30
Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = -1
Query:  269 KSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIM-RMMAR-NSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETM 796
            K   AYHE GH I G L P HDP  KVT++PRG+A G+T+F+P  D   IS+Q+L ++I    GGR AEE+I+G   V+TGA  D++  T LAK MVT +G SE +GP  L+   + G++ + R +A+   MS++ A  ID  VK L +  Y  A + +  N + +  + E L++ ET+
Sbjct:  408 KESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGP--LLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETI 584          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_BUCBP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=ftsH PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.368e-29
Identity = 72/182 (39.56%), Postives = 109/182 (59.89%), Query Frame = -1
Query:  266 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNS--MSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMS 802
            K K   AYHE GH I G L P HDP  KVT++PRG+A G+T+F+P DD   I+K +L ++I    GGR AEE+I+G   V+TGA  D++  T LA+ MVT +G S ++GP  L+   + G++ +      S  MS++ A  ID  VK L ++ Y  A   +  N + +  + + L++ ET++
Sbjct:  406 KQKESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGRALGVTFFLPKDDVLSINKNKLESQISTLYGGRLAEEIIYGVNNVSTGAHNDIKVATNLARNMVTQWGFSKKLGP--LLYSEEEGEIFLGRTVTKSKHMSDETARIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETIN 585          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.368e-29
Identity = 76/187 (40.64%), Postives = 107/187 (57.22%), Query Frame = -1
Query:  242 SKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 799
            SK L AYHE GHAI    T G  P+ K T++PRG A G+   +PS+D T +SK+QL AR+   +GGR AEE+IFG   +TTGA+ DL Q T LA+ MV++ GMSE IGP               +  +   S  +   IDA V +L   AYE   S ++ + + +  +   LLE ET++ ++ + IL
Sbjct:  613 SKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEELIFGLDHITTGASSDLSQATELAQYMVSSCGMSEAIGP---------------VHIKERPSSDMQSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRIL 784          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_RICFE (Cell division protease ftsH homolog OS=Rickettsia felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.786e-29
Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = -1
Query:  239 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 802
            K K L AYHE GHA+ G   P   P+ K T++PRG A G+   +P  D    +++Q+ + I   + GR AEE+IFG  +VT+GA+ D++  T +A+ MVT  G+S+ IGP  +  GS S D+  R  + N  SE  AE IDA VK++  + YE A   +  + + +  +   L+E ET+SG + + +LS
Sbjct:  409 KEKRLTAYHEGGHALVGLYCPAASPLHKATIIPRGNALGMVQRLPETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGP--IFHGSSSDDMYGRQPS-NETSEATAELIDAEVKKIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNLLS 594          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_BUCAP (Cell division protease ftsH OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ftsH PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.786e-29
Identity = 74/179 (41.34%), Postives = 109/179 (60.89%), Query Frame = -1
Query:  269 KSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIM-RMMAR-NSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETM 796
            K   AYHE GH I G L P HDP  KVT++PRGQA G+T+F+P  D   IS+Q+L ++I    GGR AEE+I+G   V+TGA  D++  T LA+ MVT +G S+ +GP  L+   + G+V + R +A+   MS++ A  ID  VK L +  Y  A   +  N + +  + + L++ ET+
Sbjct:  408 KESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGP--LLYAEEEGEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETI 584          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.788e-29
Identity = 72/184 (39.13%), Postives = 110/184 (59.78%), Query Frame = -1
Query:  254 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEF 802
            K K  +A HE GHA+ G ++   D V K++++PRG A G+T  +P +D  +  K+ L+ +I+  LGGRAAEEV FG   +TTGA  DLQ+ T LA +MV+ +GMS+ +GP ++     +   +  M      S  L  +ID  VKR+    YE A + +   +E +  +V+ LLEKET++ +EF
Sbjct:  410 KEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPRGMALGVTQQLPIEDKHIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIR--RVANPFLGGMTTAVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEF 591          
The following BLAST results are available for this feature:
BLAST of CX043421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FTSH1_HAEIN2.110e-3037.95Cell division protease ftsH homolog 1 OS=Haemophil... [more]
FTSH_RICTY4.701e-3038.62Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_MYCPU4.701e-3035.42Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_RICCN6.140e-3039.15Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_BUCAI6.140e-3041.90Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_BUCBP1.368e-2939.56Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSHB_ARATH1.368e-2940.64Cell division protease ftsH homolog 11, chloroplas... [more]
FTSH_RICFE1.786e-2938.62Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_BUCAP1.786e-2941.34Cell division protease ftsH OS=Buchnera aphidicola... [more]
FTSH_AQUAE6.788e-2939.13Cell division protease ftsH homolog OS=Aquifex aeo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10H12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10H12-P24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043421 ID=CX043421; Name=CX043421; organism=Citrus sinensis; type=EST; length=814bp
TGCTTCAAAAATCAGGAGCAAAACTTTAGAAATTTACTCAATCATGACTT
TTTGAGTTAGTGTACAATCCTACTTACATTTGATCAAGAATACAGAGTAT
TATACATTCAAGTGTATGCGTTCAAAGAGTGGCTGAAATTTCAAGTATGG
ATAATATTAATGCCACTCAAACAGATACAGATAATGGTGCTGGAACAGCT
GGAGGGACCCTATTTTCAGCTGGGATTTCGACAAACTCTGAGAGGATTGC
CCGGAATTCATCCCCTGACATTGTTTCCTTCTCAAGAAGAACTTCCACGA
TCTTGTCAATGGCTTCACGGTTGTTCCTTATTTGGCTCAACGCAATCTCA
TAGGCACGGTCTGATAGTCTCTTGACTGCAGCATCAATGTCTTCAGCAAG
CTTCTCAGACATTGAGTTCCTTGCCATCATTCTCATGATGACATCACCAC
TCTGTGATCCGTCCATGAGCGACCATGGGCCAATTTCAGACATTCCAAAT
GTGGTTACCATCTGTTTGGCCAAACCAGTGATCTGCTGCAAATCACCAGC
TGCTCCTGTTGTCACTTCAGGCCCTCCAAAAATCACTTCCTCAGCAGCTC
TACCACCGAGTCCACCAACAATTCTTGCAAAGAGCTGCTGCTTCGATATC
AAGGTGGGGTCATCTGAAGGGATGAACCAGGTAAGACCTCTTGCCTGACC
ACGTGGAACAAGGGTGACTTTTTGAACGGGATCGTGTCCAGGAGTCAAAG
TTCCGCATATTGCGTGGCCAACTTCATGGTATGCAACAAGACTTTTACTC
TTCCCATCTGTCAT
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