CX043421

Overview
NameCX043421
Unique NameCX043421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_RICBR (Cell division protease ftsH homolog OS=Rickettsia bellii (strain RML369-C) GN=ftsH PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.866e-29
Identity = 67/189 (35.45%), Postives = 112/189 (59.26%), Query Frame = -1
Query:  239 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILS 802
            + K L AYHE GHA+ G      DP+ K T++PRG+A G+   +P +D   + + ++ A I   + GR AEE+IFG  +VT+GA+ D++  T +AK MVT +G+S+ +GP  +  GS S D+     + +  SE  +E ID  VK++    Y++A   +  + + +  + + L+E ET+SG + + +LS
Sbjct:  409 EQKKLTAYHEGGHALVGLYCLASDPIHKATIIPRGRALGMVMRLPENDRFSMPRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDIKMATRMAKAMVTDWGLSDKVGP--VYHGSASEDMYTNRNSSSDRSESTSELIDEEVKKIVTTGYDLAKDILTKHLDQLHILAKALIEYETLSGQQIKNLLS 595          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.975e-28
Identity = 71/191 (37.17%), Postives = 113/191 (59.16%), Query Frame = -1
Query:  233 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEF 802
            K K +VAYHE GHA+   +T G   V KV+++PRG A  G T   P ++  L+ K +L A I   LGGRAAEEV     E++TGA+ DL++ T + K MV+ +GMS +    +++  ++  +     +    SEK AE++D  +K L +  Y+     + + REAI+ +V+ L +KE ++G+  R I+SE+
Sbjct:  426 KEKKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEEVFL--EEISTGASNDLERATDIIKGMVSYYGMSSVSGLMVLEKQRNAFLGGGYGSSREFSEKTAEEMDLFIKNLLEERYQHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISEY 614          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.747e-28
Identity = 69/191 (36.13%), Postives = 114/191 (59.69%), Query Frame = -1
Query:  233 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEF 802
            K K +VAYHE GHA+   +T G   V KV+++PRG A  G T   P ++  L+ K +L A I   LGGRAAE+V     E++TGA+ DL++ T + K MV+ +GMS++    +++  ++  +     +    SEK+AE++D+ +K L +  Y      + + ++AI+ +V  L EKE ++G+  R I+SE+
Sbjct:  432 KEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFL--QEISTGASNDLERATDIIKGMVSYYGMSDVSGLMVLEKQRNSFLGGGFGSGREFSEKMAEEMDSFIKNLLEERYVHVKQTLSDYKDAIEVMVNELFEKEVITGERVREIISEY 620          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.747e-28
Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = -1
Query:  236 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 802
            +S+ L A+HE GHA+    T G  PV K T+VPRG A G+   +P  D T IS++Q+ AR+   +GGR AEE+IFG  EVT+GA+ DL+Q T LA+ MVT FGMS+       +   +G          SMS +    I++ VK+L ++AY  A + +    + +  +   LL+ ET+SG + + +L++
Sbjct:  478 ESRKLTAFHEGGHALVAIHTEGALPVHKATIVPRGMALGMVSQLPDKDETSISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDNG---------KSMSTETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTD 657          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.506e-28
Identity = 75/195 (38.46%), Postives = 110/195 (56.41%), Query Frame = -1
Query:  215 KSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIPAE 796
            + LVAYHE GHA+ G     +D VQK+T++PRGQA G T   P S D  L  K  L A I   +GGRAAEE I+G  E+TTGA+ D  + T +A+ MVT  GMS++G    +    +     ++      SE+ A+DID  +  + +  Y+ A + I+ NR+ ++ +VE LL  ET+   +   I  E  ++P E
Sbjct:  484 RKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGPLEITTGASSDFYKATNIARAMVTQLGMSKLGQVQYVPSQGTVPPGTKL-----FSEQTAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETILKSDIDYI-HEHTKLPPE 672          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.506e-28
Identity = 73/181 (40.33%), Postives = 107/181 (59.12%), Query Frame = -1
Query:  269 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLM--DGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETM 802
            + + LVAYHE GHA+ G     +D VQK+T++PRGQA G T   P S D  L  K  L A I   +GGRAAEE I+G  E+TTGA+ D  + T +A+ MVT  GMS++G    +   G+   +V +        SE+ A+DID  +  + +  Y+ A + I++NR+ ++ +VE LL  ET+
Sbjct:  485 EDRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTPKSGDLNLKRKSDLLAMIATAMGGRAAEEEIYGNLEITTGASSDFYKATNIARAMVTQLGMSKLGQVQYVPSQGTLPSNVKL-------YSEQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETI 658          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 7.506e-28
Identity = 70/191 (36.65%), Postives = 113/191 (59.16%), Query Frame = -1
Query:  233 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEF 802
            K K +VAYHE GHA+   +T G   V KV+++PRG A  G T   P ++  L+ K +L A I   LGGRAAE+V     E++TGA+ DL++ T + K MV+ +GMS +    +++  ++  +     +    SEK AE++D  +K L +  Y+     + + REAI+ +V+ L +KE ++G+  R I+SE+
Sbjct:  426 KEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVLLGGRAAEDVFL--EEISTGASNDLERATDIIKGMVSYYGMSSVSGLMVLEKQRNAFLGGGYGSSREFSEKTAEEMDLFIKNLLEERYKHVKQTLSDYREAIEIMVKELFDKEVITGERVREIISEY 614          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = -1
Query:  242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRG-QARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802
            + + ++AYHE GHA+ GT T G D V K+T++PRG  A G T+ IP DD  ++++QQL A +   L GRAAE V FG  EV+TGA  D+ + T + ++M+T +GMSE      +    +G +    +AR   SE   + +D  V R+    Y   ++ +   +E ++ I   LLE+ET+  DEF  ++
Sbjct:  394 EERRIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDRHIVTEQQLLAEVDVLLSGRAAEFVAFG--EVSTGAGNDISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLAR-EYSECTQQYVDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEFEEVI 578          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.803e-28
Identity = 74/191 (38.74%), Postives = 103/191 (53.93%), Query Frame = -1
Query:  221 LVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFVEIP 790
            L AYHE GHAI    T G  P+ K T++PRG A G+   +PS D T ISK+QL AR+   +GGR AEE+IFG   VTTGA  DL   T LA+ MV+  GMS+ IGP               +  +   S ++   IDA V +L   AY      ++ + + +  +   LLE+ET++ DE   ++  + E P
Sbjct:  597 LTAYHESGHAIVALNTQGAHPIHKATILPRGSALGMVTQLPSQDETSISKKQLLARLDVCMGGRVAEELIFGEDNVTTGARNDLHTATELAQYMVSNCGMSDAIGP---------------VHVKERPSVEMQSRIDAEVVKLLREAYGRVKRLLKKHEKQLHALANALLERETLTADEINKVVHPYQEEP 772          
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_STRR6 (Cell division protease ftsH homolog OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.280e-27
Identity = 74/187 (39.57%), Postives = 111/187 (59.36%), Query Frame = -1
Query:  245 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAI 802
            K + LVAYHE GH I G +      V KVT+VPRG+A G    +P +D  L+SK+ +  ++ G +GGR AEE+IF     TTGA+ D +Q T +A+ MVT +GMSE +GP    +G+ +  ++     + S+SE+ A +ID  V+ L + A   A   I++NRE    I E LL+ ET+   + +A+
Sbjct:  441 KERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALPKEDQMLLSKEDMKEQLAGLMGGRVAEEIIFN--VQTTGASNDFEQATQMARAMVTEYGMSEKLGPVQ-YEGNHA--MLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKAL 622          
The following BLAST results are available for this feature:
BLAST of CX043421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FTSH_RICBR8.866e-2935.45Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_HELPJ1.975e-2837.17Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELFE5.747e-2836.13Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH4_ARATH5.747e-2838.62Cell division protease ftsH homolog 4, mitochondri... [more]
FTSH_MYCPN7.506e-2838.46Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCGE7.506e-2840.33Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_HELPY7.506e-2836.65Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_TREPA9.803e-2837.23Cell division protease ftsH homolog OS=Treponema p... [more]
FTSH9_ORYSJ9.803e-2838.74Cell division protease ftsH homolog 9, chloroplast... [more]
FTSH_STRR61.280e-2739.57Cell division protease ftsH homolog OS=Streptococc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10H12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10H12-P24-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043421 ID=CX043421; Name=CX043421; organism=Citrus sinensis; type=EST; length=814bp
TGCTTCAAAAATCAGGAGCAAAACTTTAGAAATTTACTCAATCATGACTT
TTTGAGTTAGTGTACAATCCTACTTACATTTGATCAAGAATACAGAGTAT
TATACATTCAAGTGTATGCGTTCAAAGAGTGGCTGAAATTTCAAGTATGG
ATAATATTAATGCCACTCAAACAGATACAGATAATGGTGCTGGAACAGCT
GGAGGGACCCTATTTTCAGCTGGGATTTCGACAAACTCTGAGAGGATTGC
CCGGAATTCATCCCCTGACATTGTTTCCTTCTCAAGAAGAACTTCCACGA
TCTTGTCAATGGCTTCACGGTTGTTCCTTATTTGGCTCAACGCAATCTCA
TAGGCACGGTCTGATAGTCTCTTGACTGCAGCATCAATGTCTTCAGCAAG
CTTCTCAGACATTGAGTTCCTTGCCATCATTCTCATGATGACATCACCAC
TCTGTGATCCGTCCATGAGCGACCATGGGCCAATTTCAGACATTCCAAAT
GTGGTTACCATCTGTTTGGCCAAACCAGTGATCTGCTGCAAATCACCAGC
TGCTCCTGTTGTCACTTCAGGCCCTCCAAAAATCACTTCCTCAGCAGCTC
TACCACCGAGTCCACCAACAATTCTTGCAAAGAGCTGCTGCTTCGATATC
AAGGTGGGGTCATCTGAAGGGATGAACCAGGTAAGACCTCTTGCCTGACC
ACGTGGAACAAGGGTGACTTTTTGAACGGGATCGTGTCCAGGAGTCAAAG
TTCCGCATATTGCGTGGCCAACTTCATGGTATGCAACAAGACTTTTACTC
TTCCCATCTGTCAT
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