CX043421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.262e-23 Identity = 65/189 (34.39%), Postives = 99/189 (52.38%), Query Frame = -1 Query: 242 DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 808 D K+K++ AYHE GHAI T P+ K T++PRG G +P +D ++ QL A++ +GGR AEE+IFG +TTGA+ D T +AK+MVT FGMSE +M S +G +S + I+ ++ L +YE A ++ + + + E LL ET+ E + +L Sbjct: 531 DNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSE--KLGVMTYSDTG----------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVL 707
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.262e-23 Identity = 65/191 (34.03%), Postives = 106/191 (55.50%), Query Frame = -1 Query: 245 MTDGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAI 814 +TD K+ A+HE GHAI T G P+ K T++PRG+A G+T+ +P D I+K++ AR+ +GG+ AEE+I+G T+G DLQ TG A+ MVT +GMS ++GP +L + +S +R +A N + E L + + A + L+ + E + ++ + L+E ET+ E + Sbjct: 529 LTDAARKA-TAFHEAGHAIMAKYTNGATPLYKATILPRGRALGITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLSENWESWSNKIRDIADNEVIELLKDSEERARRLLTKKNVE------------LHRLAQGLIEYETLDAHEIEQV 706
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.566e-23 Identity = 69/189 (36.51%), Postives = 103/189 (54.50%), Query Frame = -1 Query: 242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQ-ARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802 + K VAYHE GHA+CG DP+ KV+++PRGQ A G ++P D LIS++Q R++ LGGR +EE+ F P VT+GA D +++T +A MVT+ GMS +IG S + V S K A ID VK + D A+ + N + +D + + LL KE ++ ++ +L Sbjct: 550 EEKRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQ-YLISEEQFRHRMIMALGGRVSEELHF--PSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGNFKV------NKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLL 729
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.566e-23 Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = -1 Query: 269 KSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETM 796 K+ VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +++QLF R+ LGGR AE++ FG ++TTGA DL+++T A + FGMSE D + G+ M SE A+ ID V+ L AY L + RE ++K+ LLEKE + Sbjct: 560 KTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGKGLGYAQYLPREQ-FLYTREQLFDRMCMMLGGRVAEQLFFG--QITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDFPRQGET----MVEKPYSEATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVL 728
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.270e-23 Identity = 65/189 (34.39%), Postives = 99/189 (52.38%), Query Frame = -1 Query: 242 DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 808 D K+K++ AYHE GHAI T P+ K T++PRG G +P +D ++ QL A++ +GGR AEE+IFG +TTGA+ D T +AK+MVT FGMSE +M S +G +S + I+ ++ L +YE A ++ + + + E LL ET+ E + +L Sbjct: 589 DNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSE--KLGVMTYSDTG----------KLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVL 765
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.270e-23 Identity = 67/186 (36.02%), Postives = 104/186 (55.91%), Query Frame = -1 Query: 236 VAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 787 VAYHE GHA+ G +P+ KVT+VPRG A G ++P+D+ L++K+QLF LGGRAAEEV+ G +++TGA DL+++T + V +G SE +G S ++ S + A ID V+ +AYE + I+ +++ + +I E+LLEKE + D+ +L E Sbjct: 582 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDN-LLMTKEQLFDMTCMTLGGRAAEEVLIG--KISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQREDGFEM------SKPYSSQTASIIDTEVREWVAKAYEKTVELIKQHKDQVAQIAELLLEKEVLHQDDLVQVLGE 758
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 7.270e-23 Identity = 63/187 (33.69%), Postives = 103/187 (55.08%), Query Frame = -1 Query: 242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802 + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +K+QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ SE A ID V+ L + AY+ ++ + + ++K+ +LLEKE + ++ +L Sbjct: 566 EEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL----EKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 745
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23 Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = -1 Query: 242 DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 808 D K+K++ AYHE GHAI T P+ K T++PRG G +P +D + QL A++ +GGR AEE+IFG +TTGA+ D T +AK+MVT FGMSE +M S +G +S + I+ ++ L +YE A ++ + + + E LL ET+ E + +L Sbjct: 531 DNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSE--KLGVMTYSDTG----------KLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVL 707
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23 Identity = 63/187 (33.69%), Postives = 101/187 (54.01%), Query Frame = -1 Query: 242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802 + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +K+QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ SE A ID V+ L AY ++ + + ++K+ +LLEKE + ++ +L Sbjct: 565 EEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQ-YLYTKEQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL----EKPYSEATARMIDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQLL 744
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.240e-22 Identity = 68/206 (33.01%), Postives = 110/206 (53.40%), Query Frame = -1 Query: 206 DGKSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGM-SEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDK----IVEVLLEKETMSGDEFRAILSEFVEIPAENRV 808 D ++ + A+HE GHA+ LT P+ KVT++PRG+A GLT F+ D + +++ QL A++ +GGR EE++FG +VT GAA D ++ T LA+ MV FG S+IGP + D + E+L E + + D+ +L+++R + K + E LL ET++ DE A+L+ ++ P V Sbjct: 415 DDQTNRVSAFHEAGHALVALLTADSIPLHKVTIIPRGEAGGLTSFLQEKDISFMTRAQLLAQLDVLMGGRVGEELVFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPD---------------TQDEQLGEATRDLIDKEVDQLLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKDEVLAVLAGKMKPPKTQSV 605 The following BLAST results are available for this feature:
BLAST of CX043421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043421 ID=CX043421; Name=CX043421; organism=Citrus sinensis; type=EST; length=814bpback to top |