CX043421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.115e-22 Identity = 62/187 (33.16%), Postives = 103/187 (55.08%), Query Frame = -1 Query: 242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802 + K VAYHE GHA+ G DP+ KV+++PRG+ G ++P + L +++QL R+ LGGR +EE+ FG +TTGA DL+++T A + FGM+E D + GD+++ SE A ID V+ L + AY+ ++ + + ++K+ +LLEKE + ++ +L Sbjct: 567 EEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPREQ-YLYTREQLLDRMCMTLGGRVSEEIFFG--RITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVL----EKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELL 746
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.608e-22 Identity = 68/185 (36.76%), Postives = 101/185 (54.59%), Query Frame = -1 Query: 236 VAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 787 VAYHE GHA+ G +P+ KVT+VPRG A G ++P+++ L++K+QLF LGGRAAEEV+ G ++TGA DL+++T + V +G SE L+ Q D S + A ID V+ +AY+ + I ++E + KI E+LLEKE + D+ +L E Sbjct: 597 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEEVLIG--RISTGAQNDLEKVTKMTYAQVAVYGFSE--KVGLLSFPQRDD---GFEMTKPYSNQTASIIDDEVREWVGKAYKKTVELITEHKEQVAKIAEMLLEKEVLHQDDLVRVLGE 773
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.339e-21 Identity = 56/188 (29.79%), Postives = 108/188 (57.45%), Query Frame = -1 Query: 242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802 ++K + AYHE GHA+ T K T++PRG + G+T +P D ++++ A + +GGRAAEE+++G ++T+GA D+ + T +A++MVT FGMS+ IGP SL +++S +++ +K L + +YE +LS ++++++ +D + L++ E ++ +E ++ Sbjct: 522 ENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGKDKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSL------------EAEMDNLSPATRALVESEIKSLLEASYERSLSLLKSHKKELDALATALVDYEFLTAEEMNRVV 697
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.339e-21 Identity = 66/186 (35.48%), Postives = 103/186 (55.38%), Query Frame = -1 Query: 236 VAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 787 VAYHE GHA+ G +P+ KVT+VPRG A G ++P+++ L++K+QLF LGGRAAE+V+ G ++TGA DL+++T + V +G S+ IG L+ Q D + S + ID V+ +AY+ + I ++E + +I E+LLEKE + D+ +L E Sbjct: 589 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLIG--RISTGAQNDLEKVTKMTYAQVAVYGFSDKIG---LLSFPQREDEFSK-----PYSNRTGAMIDEEVREWVGKAYKRTVELIEEHKEQVAQIAELLLEKEVLHQDDLTKVLGE 763
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH3_ARATH (Cell division protease ftsH homolog 3, mitochondrial OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20 Identity = 65/186 (34.95%), Postives = 100/186 (53.76%), Query Frame = -1 Query: 236 VAYHEVGHAICGTLTPGHDPVQKVTLVPRGQAR-GLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSE 787 VAYHE GHA+ G +P+ KVT+VPRG A G ++P+++ L++K+QLF LGGRAAE+V+ G +++TGA DL+++T + V +G S+ +G S D S K ID V+ +AYE + + ++ + +I E+LLEKE + D+ IL E Sbjct: 583 VAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNEN-LLMTKEQLFDMTCMTLGGRAAEQVLIG--KISTGAQNDLEKVTKMTYAQVAVYGFSDKVGLLSFPPRDDGYDF------SKPYSNKTGAIIDEEVRDWVAKAYERTVELVEEHKVKVAEIAELLLEKEVLHQDDLLKILGE 759
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.516e-20 Identity = 71/199 (35.68%), Postives = 110/199 (55.28%), Query Frame = -1 Query: 230 GKSKSLVAYHEVGHAICGT----LTPGHDPVQKVTLVPR-GQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFV 805 G K++VA HE GHA+ GT L G V+K++++PR G A G T+ P S+D L+ +L R+V LGGRAAEEV++ G ++TGA D+++ T +A + V +G+++ IGP S+ S G KL + + V L A ++ALS +R N + ++ + L EKE + G+E + LS V Sbjct: 581 GNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLGRLVTLLGGRAAEEVVYSG-RISTGAFDDIRRATDMAYKAVAEYGLNQKIGPVSVATLSGGGIDDSGGSPWGRDQGKLVDLVQKEVTILLQSALDVALSVVRANPDVLEGLGAQLEEKEKVEGEELQKWLSMVV 778
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 60/186 (32.26%), Postives = 96/186 (51.61%), Query Frame = -1 Query: 245 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSEIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAI 802 + + +VAYHE GHAI G + V+KVT+VPRG+ G +P ++ + L ++ +GGR EE++FG T GA+ D+++ T +A+ MVT +GMS+ +G + + SE A ID V+R+ AY+ A I +RE I E LL+ ET+ + ++ Sbjct: 448 REREIVAYHEAGHAIVGLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIMQPTNFHLQDQLASLMGGRLGEEIVFG--VATPGASNDIEKATHIARSMVTEYGMSKKLGMVSYEGDHQVFIGRDYGQTKTYSEATAVMIDDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSL 631
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 71/199 (35.68%), Postives = 108/199 (54.27%), Query Frame = -1 Query: 230 GKSKSLVAYHEVGHAICGT----LTPGHDPVQKVTLVPR-GQARGLTWFIP-SDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMSE-IGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAILSEFV 805 G K++VA HEVGHA+ GT L PG V+K++++PR G A G T+ P ++D L+ +L R+V LGGRAAEEV+ G V+TGA D+++ T +A + V +G+++ IGP S+ S G L + + VK L A ++ALS +R N ++ + L E E + G+E + L V Sbjct: 602 GNEKAVVARHEVGHAVVGTAVANLLPGQPRVEKLSILPRSGGALGFTYTPPTTEDRYLLFVDELRGRLVTLLGGRAAEEVVLSG-RVSTGALDDIRRATDMAYKAVAEYGLNQRIGPISVATLSNGGLDESGGSPWGRDQGHLVDLVQREVKALLQSALDVALSVVRANPTVLEGLGAYLEENEKVEGEELQEWLKSVV 799
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 64/189 (33.86%), Postives = 103/189 (54.50%), Query Frame = -1 Query: 242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802 + + +VA+HE GHA+ G L + V KV++ PR A G + +P D L +K+QLF R+ LGGRAAE + F VT+GA DL+++T +A MV FGM+ IGP S + + + + R S+ L + +D K L +AY + +N + + + LLEKE ++ ++ A++ Sbjct: 566 EEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ-YLFTKEQLFERMCMALGGRAAEAISFS--RVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEG----LMGIGRRPFSQGLQQMMDHEAKLLVAKAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALI 747
BLAST of CX043421 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.760e-20 Identity = 64/189 (33.86%), Postives = 103/189 (54.50%), Query Frame = -1 Query: 242 KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLVPR-GQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEVIFGGPEVTTGAAGDLQQITGLAKQMVTTFGMS-EIGPWSLMDGSQSGDVIMRMMARNSMSEKLAEDIDAAVKRLSDRAYEIALSQIRNNREAIDKIVEVLLEKETMSGDEFRAIL 802 + + +VA+HE GHA+ G L + V KV++ PR A G + +P D L +K+QLF R+ LGGRAAE + F VT+GA DL+++T +A MV FGM+ IGP S + + + + R S+ L + +D + L RAY + +N + + + LLEKE ++ ++ A++ Sbjct: 529 EEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQ-YLFTKEQLFERMCMALGGRAAEAISFS--RVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEG----LVGIGRRPFSQGLQQMMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALI 710 The following BLAST results are available for this feature:
BLAST of CX043421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043421 ID=CX043421; Name=CX043421; organism=Citrus sinensis; type=EST; length=814bpback to top |