DC900211
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22_TRIGR (60S ribosomal protein L22 OS=Tripneustes gratilla GN=RPL22 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.277e-22 Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 436 F IDC PVED IMD ++ E+FLQERIKV GK L ++ + R+K+K+TVTS+ FS +N+RDWLRV+A+NK+ YELRYF I +++ EEED Sbjct: 25 FTIDCTLPVEDGIMDASNFEQFLQERIKVNGKTKNLTTNIVIERKKSKVTVTSEIAFSKRYLKYLTKKYLKKNNLRDWLRVVAANKES--YELRYFQINQDDEEEED 129
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22_XENTR (60S ribosomal protein L22 OS=Xenopus tropicalis GN=rpl22 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 5.365e-21 Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 436 F +DC PVED IMD A+ E+FL +RIKV GK G LG V++ R K+KITV+S+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22_XENLA (60S ribosomal protein L22 OS=Xenopus laevis GN=rpl22 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 5.365e-21 Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 436 F +DC PVED IMD A+ E+FL +RIKV GK G LG V++ R K+KITV+S+ FS +N+RDWLRV+A++K+ YELRYF I ++E EEED Sbjct: 21 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22_DROME (60S ribosomal protein L22 OS=Drosophila melanogaster GN=RpL22 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19 Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 436 F IDC ED IMD+A EK+++ R+KV GK LG++VT R K K+ V+SD +FS +++RDW+RV+A+ KD YELRYF I+ N+ E++D Sbjct: 193 FTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDS--YELRYFRISSNDDEDDD 297
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22L_XENTR (60S ribosomal protein L22-like 1 OS=Xenopus tropicalis GN=rpl22l1 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.021e-19 Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 113 TFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEED 436 +F +D PVED I D + E+FL+ERIKV GK G LG V + R K+KITV+S+ FS +N+RDWLRV+AS D+ YELRYF I++++ E + Sbjct: 14 SFTLDLTHPVEDGIFDSVNFEQFLKERIKVNGKTGNLGSIVHIGRLKSKITVSSEKKFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDDESESE 119
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22_GADMO (60S ribosomal protein L22 (Fragment) OS=Gadus morhua GN=rpl22 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19 Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDS-VTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGE 427 F +DC PVED IMD A+ E+FLQERIKV GK+G LG+ V++ R +KI+V S+ FS +N+RDWLRV+A+ K+ YELRYF I ++E E Sbjct: 18 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKSGNLGNGVVSIERXXSKISVNSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDEEE 120
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22L_HUMAN (60S ribosomal protein L22-like 1 OS=Homo sapiens GN=RPL22L1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19 Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEE 433 F +D PVED I D + E+FL+E++KV GK G LG+ V + R K KITV S+ FS +N+RDWLRV+AS D+ YELRYF I+++E E E Sbjct: 16 FNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDEDESE 119
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22L_MOUSE (60S ribosomal protein L22-like 1 OS=Mus musculus GN=Rpl22l1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18 Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENE--GEEED 436 F +D PVED I D + E+FL+E++KV GK G LG+ V + R K KITV S+ FS +N+RDWLRV+AS D+ YELRYF I+++E E ED Sbjct: 16 FHLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERLKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDEDGSESED 122
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22_SCHPO (60S ribosomal protein L22 OS=Schizosaccharomyces pombe GN=rpl22 PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 1.615e-17 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRE-KTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEE 433 ++ID V DKI D+A+ EK+L +RIKV GK G LG SV V+RE +KI V + +FS H++RDWLRV+++ K VYELRY+N+ EEE Sbjct: 12 YIIDATAAVNDKIFDVAAFEKYLIDRIKVDGKTGNLGSSVVVSREGSSKIAVIAHIDFSGRYLKYLTKKFLKKHSLRDWLRVVSTKK--GVYELRYYNVVVGNDEEE 116
BLAST of DC900211 vs. ExPASy Swiss-Prot
Match: RL22L_BOVIN (60S ribosomal protein L22-like 1 OS=Bos taurus GN=RPL22L1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17 Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 116 FVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKTKITVTSDSNFSXXXXXXXXXXXXXXHNVRDWLRVIASNKDRSVYELRYFNIAENEGEEE 433 F +D VED I D + E+FL+E++KV GK G LG+ V + R K KI V S+ FS +N+RDWLRV+AS D+ YELRYF I+++E E E Sbjct: 16 FNLDLTHAVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKIIVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVAS--DKETYELRYFQISQDEDESE 119 The following BLAST results are available for this feature:
BLAST of DC900211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900211 ID=DC900211; Name=DC900211; organism=Citrus sinensis; type=EST; length=616bpback to top |