DC900207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26 Identity = 64/130 (49.23%), Postives = 92/130 (70.77%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N +RQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGRL+E++++S + T++RY ++C +S + E + QE KL+ ++ +Q R+ILGE L L+ KEL+ LE ++E + ++RSR Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY-RSCNYNSQDAAAPENEINY--QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSR 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26 Identity = 64/130 (49.23%), Postives = 92/130 (70.77%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N +RQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGRL+E++++S + T++RY ++C +S + E + QE KL+ ++ +Q R+ILGE L L+ KEL+ LE ++E + ++RSR Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERY-RSCNYNSQDAAAPENEINY--QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSR 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26 Identity = 66/128 (51.56%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN-NSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVR 560 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RGRLYE+A+ S++ TIDRYK D N +I + + Q + + L +++ + R ILGE L + +EL+ LE +LEK + +R Sbjct: 13 NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTI-QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIR 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 6.275e-26 Identity = 66/135 (48.89%), Postives = 89/135 (65.93%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATI----DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSRTS 572 NT NRQVTF KRR+GLLKKA E+SVLCDAEVALI+FS++G+LY+YA +S I +RY A + S T+ N + E KL+ ++ IQ +H++GE L +LN KEL+ LE +LE + +RSR S Sbjct: 13 NTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGN---WCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKS 144
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.070e-25 Identity = 64/132 (48.48%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKK---ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRS 563 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + + P A QQE KL+ + +Q R++LGE L L+ KEL++LE +L+ + ++R+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRA 144
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.070e-25 Identity = 66/135 (48.89%), Postives = 88/135 (65.19%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATI----DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSRTS 572 N NRQVTF KRR+GLLKKA E+SVLCDAEVALI+FS++G+LYEYA +S I +RY A + S T+ N + E KL+ ++ IQ +H++GE L +LN KEL+ LE +LE + +RSR S Sbjct: 13 NKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGN---WCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKS 144
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.398e-25 Identity = 59/132 (44.70%), Postives = 93/132 (70.45%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 ++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FSS G+LY++A++S+++ IDRY K+ + NP S +F+Q+EA LR+++ +Q +R ++GE L+ L+ EL +LE ++E + +R R Sbjct: 13 DSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPAS----EVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIEISLRGIRMR 140
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.384e-25 Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVR 560 N NRQVTF KRRNGLLKKAYELSVLCDAEV+LIVFS+RG+LYE+ + S + T++RY+K S + + +E KL+ + +Q R++LGE L LN KEL+ LE +L+ + +VR Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVR 140
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.384e-25 Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY--ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 NTTNRQVTF KRR GLLKKA+ELSVLCDAE+ LI+FSS G+L+EY A++S++ I+RY+K + ITE + Q E T+++ + ++Q R ++GE L++L EL +L +LE RVRSR Sbjct: 13 NTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKV-----SGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSR 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.384e-25 Identity = 64/138 (46.38%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKK--------ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EYAN+S + ++RY++ D ++PGS T E KL+ ++ +Q +H +GE L +LN KEL+NLE +L+ + +RSR Sbjct: 13 NKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWT--------LEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSR 142 The following BLAST results are available for this feature:
BLAST of DC900207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900207 ID=DC900207; Name=DC900207; organism=Citrus sinensis; type=EST; length=572bpback to top |