DC900207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25 Identity = 61/132 (46.21%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRS 563 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++ + E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRT 143
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25 Identity = 61/132 (46.21%), Postives = 91/132 (68.94%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRS 563 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ + S+ T+++Y+K C+ + ++ ++ + E KL+ ++ +Q R++LGE L +L KEL++LE +L+ + VR+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQK-CSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRT 143
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25 Identity = 59/129 (45.74%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S + TI+RY+ ++ ++ + + + + +A L +++ ++ R +LGE L + +EL +LE +LE+ + +R R Sbjct: 13 NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGNKTV-QQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVKLERSLISIRGR 140
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.114e-25 Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS----VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSRTS 572 N NRQVTF KRRNGLLKKA+E+SVLCDAEVA IVFS +G+LYEYA +S + +RY A + S +E N + E KL+ +I IQ ++H++GE L +LN KEL+ LE +LE + + SR S Sbjct: 13 NKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGN---WCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKS 144
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 5.312e-25 Identity = 57/132 (43.18%), Postives = 93/132 (70.45%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 NT NRQVTF KRR GL+KKA EL++LCDA+V LIVFS GRLY+++++S+++ I+RY++A + NP S +F+Q+E T LR+Q++ + + NR +LGE +S ++L+ L+ ++E + +R++ Sbjct: 13 NTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMS----EAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNK 140
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.061e-25 Identity = 64/132 (48.48%), Postives = 90/132 (68.18%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKK---ACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRS 563 N NRQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RG+LYE+ +++S+ T++RY+K + + P A QQE KL+ + +Q R++LGE L L+ KEL+ LE +L+ + ++R+ Sbjct: 13 NKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRA 144
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.061e-25 Identity = 59/130 (45.38%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY-ANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS RG+LYE+ +++S+ T++RY+K D + + N+Q + E L R+I ++ R ++GE L + +EL+ LE +L++ + ++R++ Sbjct: 13 NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERYQKRIQDLGSNHKRND-NSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAK 141
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.183e-24 Identity = 61/129 (47.29%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N RQVTF KR++GLLKKAYELSVLCDAEV+LI+FS+ G+LYE++N V TI+RY + C D+ E +TQ +QE TKL+ + + +R+++GE L ++ KEL+ LE +LE + R + Sbjct: 13 NKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYR-CKDNLLDNDTLE-DTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQ 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 2.636e-24 Identity = 57/132 (43.18%), Postives = 92/132 (69.70%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 ++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FS+ +LY++A++SV++TI+R+ A + NP S +F+Q+EA LR+++ +Q R + G L+ L+ KEL+N+E++LE + +R + Sbjct: 13 DSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPAS----EVKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMK 140
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.443e-24 Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VRATIDRYKKA--CADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRS 563 N +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FS+RGRL+E++ +S + T++RY+ +S + E Y QE KL+ ++ +Q R++LGE L L+ KEL+ LE ++E + +RS Sbjct: 13 NKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNY-QEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRS 142 The following BLAST results are available for this feature:
BLAST of DC900207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900207 ID=DC900207; Name=DC900207; organism=Citrus sinensis; type=EST; length=572bpback to top |