DC900207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.267e-18 Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN--NSVRATIDRYKKACADSSNPGSIT-EANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N+TNRQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y + S+ +++Y+ +N G I + + E +++++ +Q RH+ GE L++L KEL +E L+ GI V + Sbjct: 13 NSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDK 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.267e-18 Identity = 52/128 (40.62%), Postives = 72/128 (56.25%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYK--KACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRV 557 N RQVTF KRR GL KKA ELS+LCDAEV L+VFS+ G+L+++A+ S+ IDRY + P + +L+ ++ E R + GE L LN ++L+ LE LE G+G V Sbjct: 32 NLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGED--SSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSV 157
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.267e-18 Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRAT--IDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N TNRQVTF KRR GLLKKA EL++LCDA++ +IVFS G++YEY++ R DRY KA + + Q QE T+++ + ++ + R +G+ L++L +++ NLE ++E + +VR R Sbjct: 13 NPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDV----QQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLR 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18 Identity = 54/139 (38.85%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN--SVRATIDRYKKACADSSNPGSITEANTQFYQ--------QEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S+R I+ Y+ T NT F + E T++R ++ ++ R G+ LS L ++ +LE +LE + +VR+R Sbjct: 13 NATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ------------TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRAR 139
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.655e-18 Identity = 48/131 (36.64%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRAT--IDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N++NRQVT+ KRRNG++KKA E+SVLCDA V++I+F+S G+++E+ + S +D Y K + + + E +++++ +Q RH+ GE ++TLN+KEL LE LE G ++++ Sbjct: 13 NSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGK-----RLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNK 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.162e-18 Identity = 56/124 (45.16%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 192 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRATIDRYKKACADSSNPGSITEANTQFYQQEA--TKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRV 557 RQVTF KRR GL KKA ELSVLCDA+VALIVFSS G+L +A++S+ ID+Y S+N G + + + + L Q+ E R + GE L L+ EL+ LE LE G+ RV Sbjct: 17 RQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYN---THSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRV 137
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.816e-18 Identity = 49/129 (37.98%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA--NNSVRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVR 560 N NR VTF KRRNGL+KKA E++VLCDA+VALI+F+S G++ +Y + + A +D+Y+K + +A + E +++++ +Q RH+ GE + +LN K L +E +E G+ +VR Sbjct: 13 NANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGK-----KLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVR 136
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.816e-18 Identity = 48/133 (36.09%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVRA--TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSRTS 572 N++NRQVT+ KRRNG++KKA E++VLCDA+V+LI+F + G+++EY + S +D Y+K ++ + +A + E +++++ +Q RH+ GE +++LN KEL LE L G+ + ++ S Sbjct: 13 NSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQK-----TSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQS 140
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.816e-18 Identity = 50/138 (36.23%), Postives = 82/138 (59.42%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS--VRATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHI-------LGEALSTLNFKELKNLEARLEKGIGRVRSR 566 N TNRQVT+ KRR G++KKA EL+VLCDA+VA+I+FSS G+ +E+ + S ++ DRY++A T + ++ ++R + ++++NR++ +GE L L F EL+ LE ++ + VR R Sbjct: 13 NATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHR 138
BLAST of DC900207 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 8.214e-18 Identity = 53/136 (38.97%), Postives = 75/136 (55.15%), Query Frame = 3 Query: 180 NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA-NNSVRATIDRYKKACADSSNPGSITEANTQFYQ-------QEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRS 563 N +RQVTFCKRR GLLKKA ELSVLCDAE+ +++FS +G+L+E A ++ ID+Y K S T + Q E L+++I +Q ++ G +N +EL LE LE I ++RS Sbjct: 13 NPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRS 148 The following BLAST results are available for this feature:
BLAST of DC900207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900207 ID=DC900207; Name=DC900207; organism=Citrus sinensis; type=EST; length=572bpback to top |