DC900206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900206 vs. ExPASy Swiss-Prot
Match: RSE1_SCHPO (Pre-mRNA-splicing factor rse1 OS=Schizosaccharomyces pombe GN=prp12 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.327e-27 Identity = 59/124 (47.58%), Postives = 83/124 (66.94%), Query Frame = 3 Query: 3 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIR 374 ++ + F D+ TSLQK LV G E +++ ++G++G F +++DV FF LE +R+E PPL GRDH+AYRS Y PVK VIDGDLCE + +L +Q IA+ELDRT E+ KK+E+ R Sbjct: 1079 LDLMAHFFTNDIPTSLQKVQLVEGAREVLLWTGLLGTVGVFTPFINQEDVRFFQQLEFLLRKECPPLAGRDHLAYRSYYAPVKCVIDGDLCEMYYSLPHPVQEMIANELDRTIAEVSKKIEDFR 1202
BLAST of DC900206 vs. ExPASy Swiss-Prot
Match: RSE1_EMENI (Pre-mRNA-splicing factor rse1 OS=Emericella nidulans GN=rse1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.161e-26 Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 3 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 362 +E ++ D+ TSL K LV GG + +++ G++G ++ F SR+DVDFF LEM + + PPL GRDH+ YRS Y PVK VIDGDLCEQ+ LS D + IA ELDR+ EI +K+ Sbjct: 1081 LELMIHVFTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGILVPFVSREDVDFFQSLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEQYFLLSNDTKMMIAAELDRSVREIERKI 1200
BLAST of DC900206 vs. ExPASy Swiss-Prot
Match: RSE1_ASPFU (Pre-mRNA-splicing factor rse1 OS=Aspergillus fumigatus GN=rse1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.023e-25 Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 3 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKL 362 ++ ++ + D+ TSL K LV GG + +++ G++G ++ F SR+DVDFF +LEM + + PPL GRDH+ YRS Y PVK VIDGDLCE + L D + IA ELDR+ EI +K+ Sbjct: 1081 LDLMIHTYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGMLVPFVSREDVDFFQNLEMQLASQCPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI 1200
BLAST of DC900206 vs. ExPASy Swiss-Prot
Match: RSE1_DEBHA (Pre-mRNA-splicing factor RSE1 OS=Debaryomyces hansenii GN=RSE1 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22 Identity = 55/139 (39.57%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 3 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHP-------------PLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 380 ++ I +F++ D+ TS K SLV GG ES+IY + G+LG +L S+ ++V F L++ +R+ L G+DH+ +RS Y PVK+V+DGDL E+F LS ++ +I EL+RTP EI KK+ E+R++ Sbjct: 1115 LKNICEFYLQDIPTSFTKGSLVMGGKESIIYTGIQGTLGLLLPLSTENEVKFLGDLQLLLRKYFDYNFDDFDKDKNGYNLLGKDHLKFRSYYNPVKNVMDGDLIERFYELSQSMKIRIGTELNRTPREIEKKISEMRHR 1253
BLAST of DC900206 vs. ExPASy Swiss-Prot
Match: RSE1_CANAL (Pre-mRNA-splicing factor RSE1 OS=Candida albicans GN=RSE1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.220e-21 Identity = 46/126 (36.51%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 3 MEEIVQFHVGDVVTSLQKASLVPGGGESVIYGTVMGSLGAMLAFSSRDDVDFFSHLEMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLSLDLQRKIADELDRTPGEILKKLEEIRNK 380 ++ +++FH+GD++TS L G ESVIY + G++G ++ S+ +V+ +L+++M+Q L G+DH+ RS Y P+K+VIDGDL E+F + L+ +I+ +L+++ +I KKL ++RN+ Sbjct: 1091 LQNLIEFHIGDIITSFNLGCLNLAGTESVIYTGLQGTIGLLIPLVSKSEVELLFNLQLYMQQSQNNLVGKDHLKLRSYYNPIKNVIDGDLLERFLEFDISLKIEISRKLNKSVNDIEKKLIDLRNR 1216 The following BLAST results are available for this feature:
BLAST of DC900206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900206 ID=DC900206; Name=DC900206; organism=Citrus sinensis; type=EST; length=577bpback to top |