DC900201

Overview
NameDC900201
Unique NameDC900201
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 8.403e-32
Identity = 78/199 (39.20%), Postives = 112/199 (56.28%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANH----EDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYG-TTLDGTKYWIVRNSWGPEWGEKGYIRMQRGI--SDKKGLCGIAMEA 591
            CG CWAFST+ +VEG      +K   LS QEL+DCD+  N GC GGL+E A+E+++K G V+ +   P+      C V K            +VP+ H    ++ + +++   P SV +   S +   Y  GVFTGECG  LNH V  VG G   +   +YW+V+NSWG +WGE GY+R++R    +DK G+   +M A
Sbjct:  250 CGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCDSFSN-GCQGGLLESAYEYVRKYGLVSAK-DLPFVDKARRCSVPKAKK--------VSVPSYHVFKGKEVMTRSLTSSPCSVYLSV-SPELAKYKSGVFTGECGKSLNHAVVLVGEGYDEVTKKRYWVVQNSWGTDWGENGYMRLERTNMGTDKCGVLDTSMSA 437          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.403e-32
Identity = 75/193 (38.86%), Postives = 110/193 (56.99%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDA--LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+T+ ++E    I  N+ ++LSEQ+L+DCD   + GC+GGL+  AFE +   GG+  E+ YPY+AN+G C  +           +  +    E    LL++V   P+ VAIDA  SD   Y  G+        LNH V  VGY    +G  +WI++N+WG +WGE+GY R+Q+ I+     CGI  E
Sbjct:  134 CGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF-VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVG--PIPVAIDA--SDIVNYKRGIMKYCANHGLNHAVLLVGYAVE-NGVPFWILKNTWGADWGEQGYFRVQQNIN----ACGIQNE 316          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.433e-31
Identity = 75/193 (38.86%), Postives = 113/193 (58.55%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDA--LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+T+A++E    I  N+L++LSEQ+++DCD   + GCNGGL+  AFE I K GGV  E+ YPY+A++  C ++         D +  +    E    LL+ V   P+ +AIDA  +D   Y +G+      + LNH V  VGYG   +   YW  +N+WG +WGE+G+ R+Q+ I+     CG+  E
Sbjct:  133 CGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF-VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVG--PIPMAIDA--ADIVNYKQGIIKYCFNSGLNHAVLLVGYGVE-NNIPYWTFKNTWGTDWGEEGFFRVQQNIN----ACGMRNE 315          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.872e-31
Identity = 75/193 (38.86%), Postives = 112/193 (58.03%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDA--LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+T+A++E    I  N+L++LSEQ+++DCD   + GCNGGL+  AFE I K GGV  E+ YPY+A++  C ++         D +  +    E    LL+ V   P+ +AIDA  +D   Y +G+      + LNH V  VGYG   +   YW  +N+WG +WGE G+ R+Q+ I+     CG+  E
Sbjct:  133 CGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF-VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVG--PIPMAIDA--ADIVNYKQGIIKYCFNSGLNHAVLLVGYGVE-NNIPYWTFKNTWGTDWGEDGFFRVQQNIN----ACGMRNE 315          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.445e-31
Identity = 79/205 (38.54%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEGINHIMTNK-----LVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTG-ECGTE---LNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEASYP 600
            +CGSC+ F ++AA+EG   ++  K      + LSE+ +     + N GCNGGL    +++I + G V  E+ YPY  +D TC  + +S   ++  G+  VP N+E  L  A+++  + V+ID  S+ FQ Y  G +T  +C      LNH V AVGYG  +DG + WIVRNSWG  WG+KGYI M      +   CG+A +  YP
Sbjct:  110 QCGSCYTFGSLAALEG--RLLIEKGGDANTLDLSEEHMQCTRDNGNNGCNGGLGSNVYDYIIEHG-VAKESDYPYTGSDSTCKTNVKSFRKIT--GYTKVPRNNEAELKAALSQGLLDVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGV-VDGKECWIVRNSWGTSWGDKGYINM----VIEGNTCGVATDPLYP 304          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.170e-31
Identity = 85/223 (38.12%), Postives = 115/223 (51.57%), Query Frame = 1
Query:   13 ECGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFI--KKKGGVTTEAKYPYQANDGTCDVSKESSPAV--SIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAMEAS-----------YPIKKSATNPTGPS 636
            +CGSCWAFS I  VE    +  + L +LSEQ LV CD   + GC+GGLM  AFE+I  +  G V TE  YPY + +G       S   V  +I GH  +P +            PV+VA+DA S  +  Y+ GV T     +L+HGV  VGY  +     YWI++NSW  +WGE+GYIR+ +G +     C +  EAS            P   + T+  GPS
Sbjct:  143 QCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDS-GCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASS--WMTYTGGVMTSCVSEQLDHGVLLVGYNDSA-AVPYWIIKNSWTTQWGEEGYIRIAKGSNQ----CLVKEEASSAVVGGPGPTPEPTTTTTTSAPGPS 357          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.170e-31
Identity = 77/193 (39.90%), Postives = 111/193 (57.51%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDA--LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+T+ ++E    I  ++L++LSEQ+L+DCD   + GC+GGL+  A+E +   GG+  E  YPY+AN+G C V+           +  V    E    LL+ V   P+ VAIDA  SD   Y  G+        LNH V  VGYG   +G  +WI++N+WG +WGE+GY R+Q+ I+     CGI  E
Sbjct:  134 CGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF-VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVG--PIPVAIDA--SDIVGYKRGIIRYCENHGLNHAVLLVGYGVE-NGIPFWILKNTWGADWGEQGYFRVQQNIN----ACGIKNE 316          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.170e-31
Identity = 83/192 (43.23%), Postives = 103/192 (53.65%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDALLKAVAKQPVSVAIDAGSSDFQFYSEGV---FTGECGTEL-NHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGI 579
            CGSCWAFST   VE      T KL+SLSEQ+LVDCD   + GCNGGL   A+E I K GG+  E  YPY A +  C + K    AV I+   N+  +  +          +SV ++A     QFY  G+   +   C   L +H V  VGYG +     +WIV+NSWG EWGE GY RM RG     G CGI
Sbjct:  126 CGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYESIIKMGGLMLEDNYPYDAKNEKCHL-KTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALL--LQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRG----DGSCGI 309          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.113e-31
Identity = 77/194 (39.69%), Postives = 108/194 (55.67%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDA---LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+T+ ++E    I  N+L++LSEQ+ +DCD   N GC+GGL+  AFE   + GGV  E+ YPY+  +G C ++      V +          E+    LL+AV   P+ VAIDA  SD   Y  G+        LNH V  VGY    +   YWI++N+WG +WGE GY R+Q+ I+     CGI  E
Sbjct:  134 CGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR-VNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQCRINPNRF-VVGVRSCRRYIVMFEEKLKDLLRAVG--PIPVAIDA--SDIVNYRRGIMRQCANHGLNHAVLLVGYAVE-NNIPYWILKNTWGTDWGEDGYFRVQQNIN----ACGIRNE 316          
BLAST of DC900201 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.213e-30
Identity = 76/193 (39.38%), Postives = 110/193 (56.99%), Query Frame = 1
Query:   16 CGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVTTEAKYPYQANDGTCDVSKESSPAVSIDGHENVPANHEDA--LLKAVAKQPVSVAIDAGSSDFQFYSEGVFTGECGTELNHGVAAVGYGTTLDGTKYWIVRNSWGPEWGEKGYIRMQRGISDKKGLCGIAME 588
            CG+CWAF+T+ ++E    I  ++L++LSEQ+L+DCD   + GC+GGL+  A+E +   GG+  E  YPY+AN+G C ++           +  V    E    LL+ V   P+ VAIDA  SD   Y  GV        LNH V  VGY    +G  +WI++N+WG +WGE+GY R+Q+ I+     CGI  E
Sbjct:  134 CGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF-VDMGCDGGLLHTAYEAVMNMGGIQAENDYPYEANNGDCRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVG--PLPVAIDA--SDIVNYKRGVIRYCANHGLNHAVLLVGYAVE-NGVPFWILKNTWGTDWGEQGYFRVQQNIN----ACGIQNE 316          
The following BLAST results are available for this feature:
BLAST of DC900201 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
CYSP_THEPA8.403e-3239.20Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATV_NPVCF8.403e-3238.86Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVRO1.433e-3138.86Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVAC1.872e-3138.86Viral cathepsin OS=Autographa californica nuclear ... [more]
ACP2_ENTHI2.445e-3138.54Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CYSP_TRYCR4.170e-3138.12Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATV_NPVAP4.170e-3139.90Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATL_SCHMA4.170e-3143.23Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATV_NPVOP7.113e-3139.69Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CATV_NPVCD1.213e-3039.38Viral cathepsin OS=Choristoneura fumiferana defect... [more]

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Properties
Property NameValue
Genbank descriptionDC900201 VSS Citrus sinensis cDNA clone VS28238 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900201 ID=DC900201; Name=DC900201; organism=Citrus sinensis; type=EST; length=804bp
AATTCGGCACGAGAATGCGGTAGCTGCTGGGCTTTTTCAACAATTGCAGC
AGTAGAGGGCATTAATCACATTATGACAAATAAGCTCGTTTCTTTGTCTG
AGCAAGAGTTAGTTGATTGTGACACTGATCAAAACCAAGGATGTAATGGA
GGGCTAATGGAATTGGCATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAC
AACAGAGGCTAAGTACCCTTACCAAGCTAATGATGGAACATGTGACGTTT
CAAAGGAAAGTTCCCCAGCAGTGTCAATTGACGGACATGAAAATGTACCT
GCTAATCACGAGGATGCTCTGCTTAAGGCAGTTGCAAAACAGCCTGTGTC
AGTAGCCATAGATGCCGGCAGTTCAGATTTCCAGTTCTATTCAGAGGGTG
TATTTACTGGAGAATGTGGCACAGAGCTGAATCATGGAGTTGCAGCTGTG
GGCTACGGTACAACACTCGATGGAACCAAGTATTGGATAGTGAGGAACTC
ATGGGGACCTGAATGGGGAGAGAAGGGTTACATCAGAATGCAGCGCGGCA
TCTCAGACAAAAAGGGACTCTGTGGTATTGCAATGGAAGCTTCATATCCC
ATCAAGAAATCTGCAACAAACCCAACAGGACCTTCAGATTATCCTAAGGA
TGAGCTCTAGACACGGTTCACTATTGTCTTTGGCTTTTCTCTGCATTTCA
AGCTCAGCGGTTATCTCTTCTGTGTTAAAGTTGCATGTAATATGCCCTTG
TGATTCATGATTGAATAATGTTTCGATTTATGCAAATAAAGCCAACATTT
TACA
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