CX043385

Overview
NameCX043385
Unique NameCX043385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3659 contig Csv1_Contig3659:1..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPAL (Ubiquitin OS=Lupinus albus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_LINUS (Ubiquitin OS=Linum usitatissimum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_HORVU (Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_HELAN (Ubiquitin OS=Helianthus annuus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_DESAN (Ubiquitin OS=Deschampsia antarctica PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_DAUCA (Ubiquitin OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_BRARA (Ubiquitin OS=Brassica rapa PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_AVESA (Ubiquitin OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_AVEFA (Ubiquitin OS=Avena fatua PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
BLAST of CX043385 vs. ExPASy Swiss-Prot
Match: UBIQ_ASPOF (Ubiquitin OS=Asparagus officinalis PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:   78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 305
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          

HSP 2 Score: 150.599 bits (379), Expect = 1.030e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3
Query:  306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 533
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76          
The following BLAST results are available for this feature:
BLAST of CX043385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
UBIQ_LUPAL1.030e-35100.00Ubiquitin OS=Lupinus albus PE=3 SV=1[more]
UBIQ_LINUS1.030e-35100.00Ubiquitin OS=Linum usitatissimum PE=3 SV=1[more]
UBIQ_HORVU1.030e-35100.00Ubiquitin OS=Hordeum vulgare GN=MUB1 PE=3 SV=1[more]
UBIQ_HELAN1.030e-35100.00Ubiquitin OS=Helianthus annuus PE=3 SV=1[more]
UBIQ_DESAN1.030e-35100.00Ubiquitin OS=Deschampsia antarctica PE=2 SV=1[more]
UBIQ_DAUCA1.030e-35100.00Ubiquitin OS=Daucus carota PE=3 SV=1[more]
UBIQ_BRARA1.030e-35100.00Ubiquitin OS=Brassica rapa PE=3 SV=1[more]
UBIQ_AVESA1.030e-35100.00Ubiquitin OS=Avena sativa PE=1 SV=1[more]
UBIQ_AVEFA1.030e-35100.00Ubiquitin OS=Avena fatua PE=3 SV=1[more]
UBIQ_ASPOF1.030e-35100.00Ubiquitin OS=Asparagus officinalis PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10G01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10G01-N2-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043385 ID=CX043385; Name=CX043385; organism=Citrus sinensis; type=EST; length=846bp
TAAACCAATAAAAAAAAAAAAGAAACAAAAAAGATATTTAGTTTAGATAC
CGAGGCTCCCAATCTCAGCCTTCCAACATGCAGATCTTTGTGAAAACTTT
GACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCCGACACGATCGACA
ACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAGCAG
AGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGA
TTATAACATCCAGAAGGAATCCACGCTCCACCTTGTGTTGCGCCTGAGGG
GAGGAATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGATCACCCTG
GAGGTGGAGAGCTCCGACACGATCGACAACGTGAAGGCCAAGATCCAGGA
CAAAGAGGGGATTCCTCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGC
AGCTCGAGGATGGCCGGACTCTCGCCGATTACAACATTCAAAAGGAGTCC
ACTCTCCACCTTGTCCTCCGTCTCCGTGGTGGTGACTTCTAAAAAAATAA
ATGTGGATGTGTCCGCGTTTGATTGGATGGCGCTAATAATAATTAATTAG
GTTGGATTGGGCGCTTTGCTTTAATTATTTTGTAATTACAATTGTGTAAT
GGCCAGCCGCTTGGGCCTAATTTCCTCTTTCTATTGGTAATAATAATATA
AGCACTAGTTGCAAATTTTAAAGCCAACAATAGAATACTTGCTTATCTCT
AGAGGCAAATTTTAAAGCCAAAAAAATGATAGTTCAAATAGGATAAATCA
ACGTTGGAATGTTAAAATTGAACTGACTGCATGGATAGGTCTTGTA
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