DC900196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 92 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 409 F +Q++I+ H I GY VL HT V+ + L+ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 393 FDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 499
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 92 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 409 F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 522 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 92 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 409 F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 526 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 632
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 37/107 (34.58%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 92 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 409 F Q++I+ H I GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 522 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13 Identity = 36/112 (32.14%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 68 DPARXAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVE 400 +P + F +QV I+ + +G++ V+ HT+ V+ ++L+ K++R + ++ +K P F K G + + +P+ VET+ DYP LGRF +RD T+A+G ++K +E Sbjct: 551 NPVKNVTRFVAQVAIVELKSILSSGFSCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKIIE 662
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 32/106 (30.19%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 71 PARXAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 388 P + F +Q+ I+ + G++ V+ HT+ V F++L+ + + + + +K P F K G + + T+P+ +E++ DYP LGRF +RD QT+A+G + Sbjct: 632 PVKTVTRFEAQIAIVELKSILSTGFSCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKV 737
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3_CANAL (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida albicans GN=SUP35 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12 Identity = 37/117 (31.62%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 38 QRGLCXQPKDDPARXAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 388 Q G +P + F +Q+ I+ + NG++ V+ HT+ VKF EL K+++ + ++ +K P F K G + + + + ET+ DYP LGRF +RD T+A+G I Sbjct: 595 QPGYVLTSPKNPVKTVTRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFIELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVGELVCAETYKDYPQLGRFTLRDQGTTIAIGKI 711
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3_KLULA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Kluyveromyces lactis GN=SUP35 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 34/110 (30.91%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 68 DPARXAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 397 +P + F +Q+ I+ + G++ V+ HT+ V + L+ K+++ S ++ +K P F K G + + +P+ VET+ DYP LGRF +RD T+A+G I + Sbjct: 588 NPVKNVTRFVAQIAIVELKSIMSAGFSCVMHIHTAIEEVTVTRLLHKLEKGSNRKSKKPPAFAKKGMKIIAVIETNEPVCVETYDDYPQLGRFTLRDQGTTIAIGKIVKI 697
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 35/109 (32.11%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 71 PARXAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 397 P + F +Q+ I+ + NG++ V+ HT+ V F EL K+++ + ++ +K P F K G + + + + ET++DYP LGRF +RD T+A+G I V Sbjct: 592 PIKTITRFEAQIAIVELKSILSNGFSCVMHLHTAIEEVTFIELKHKLEKGTNRKSKKPPAFAKKGMKVIAILETNESVCAETYADYPQLGRFTLRDQGTTIAIGKITKV 700
BLAST of DC900196 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 2 Query: 68 DPARXAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 397 +P + F +Q+ I+ I G++ V+ HT+ V +L+ K+++ + ++ +K P F K G + + P+ VET+ DYP LGRF +RD T+A+G I + Sbjct: 574 NPIKSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683 The following BLAST results are available for this feature:
BLAST of DC900196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900196 ID=DC900196; Name=DC900196; organism=Citrus sinensis; type=EST; length=730bpback to top |