DC900195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.729e-63 Identity = 121/238 (50.84%), Postives = 161/238 (67.65%), Query Frame = 1 Query: 4 RFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 R KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NP + FVP++ GDN+ ++S WY GPTL + +D P++P+ PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+ Sbjct: 41 RLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDA--KSGIQP--QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPANITFVPVASLHGDNVFKKSDRTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAGAVGEI 272
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.949e-63 Identity = 124/234 (52.99%), Postives = 162/234 (69.23%), Query Frame = 1 Query: 1 ERFEKEAAEMNKR--SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPS 696 E K+ EM ++ SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V LK +GY + P +P S + GDN++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G V F P+ Sbjct: 36 ETIIKKFEEMGEKGKSFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLKTLGY--KDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPA 258
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 6.569e-63 Identity = 123/234 (52.56%), Postives = 162/234 (69.23%), Query Frame = 1 Query: 1 ERFEKEAAEMNKR--SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPS 696 E K+ EM ++ SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V L+ +GY + P +P S + GDN++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G V F P+ Sbjct: 36 ETIIKKFEEMGEKGKSFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLRTLGY--KDFPVIPTSAWNGDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPA 258
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 6.569e-63 Identity = 117/223 (52.47%), Postives = 156/223 (69.96%), Query Frame = 1 Query: 46 KYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 K+ +V+D+L ERERG+TID+A KFET KY T++D PGHRDF+KNMITG SQAD AVL++ G QT+EH L+ TLG+ Q+I NKMD Y + +++ + EV++ +K VGY P V F+P+S FEGDN+ +S N WYKG TL++ALD++ P++P D PLR+P+QDVY I G+GTVPVGRVETGVLK G V F P+G++ EV Sbjct: 45 KFRFVMDRLSEERERGVTIDLAHAKFETDKYEFTIVDCPGHRDFVKNMITGASQADAAVLVVAVDDGVMP-------QTKEHVFLSRTLGINQLIVAINKMDLVN--YDEEKFNALKDEVAALIKTVGYKPSDVEFIPLSAFEGDNITSKSENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYSITGVGTVPVGRVETGVLKKGENVIFEPAGVSGEV 258
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.707e-61 Identity = 118/241 (48.96%), Postives = 160/241 (66.39%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVSLL 723 E+ ++EA E K F++A+V+D L ERERG+TIDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+NP+ F+ S FEGDN+ + S N WY GPTLL+AL+ + P+ P+D LRLP+QDVY I GIGTVPVGR+ETGV+ G V+F PS + EV + Sbjct: 39 EQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDGVAP-------QTREHVFLSRTLGIDELIVAVNKMDVVD--YDESKYNEVVSGVKDLFGQVGFNPDDAKFIATSAFEGDNVSDHSDNTPWYDGPTLLEALNGLPVPQPPTDADLRLPIQDVYTISGIGTVPVGRIETGVMNTGDNVSFQPSDVGGEVKTI 270
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.707e-61 Identity = 118/241 (48.96%), Postives = 160/241 (66.39%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVSLL 723 E+ ++EA E K F++A+V+D L ERERG+TIDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+NP+ F+ S FEGDN+ + S N WY GPTLL+AL+ + P+ P+D LRLP+QDVY I GIGTVPVGR+ETGV+ G V+F PS + EV + Sbjct: 39 EQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDGVAP-------QTREHVFLSRTLGIDELIVAVNKMDVVD--YDESKYNEVVSGVKDLFGQVGFNPDDAKFIATSAFEGDNVSDHSDNTPWYDGPTLLEALNGLPVPQPPTDADLRLPIQDVYTISGIGTVPVGRIETGVMNTGDNVSFQPSDVGGEVKTI 270
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 1.370e-60 Identity = 118/238 (49.58%), Postives = 159/238 (66.81%), Query Frame = 1 Query: 1 ERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 E+ ++EA E K F++A+V+D L ERERG+TIDIA +F T Y T++D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y ++ Y ++V+EV L +V ++ E F+P+S FEGDN+ E S + WY G LL+AL+ + P+ P+D PLRLP+QDVY I GIGTVPVGRVETG+L G V+F PS ++ EV Sbjct: 39 EQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFSTDTYDFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIGELIVAVNKMDLVD--YGESEYKQVVEEVKDLLTQVRFDSENAKFIPVSAFEGDNIAEESEHTGWYDGEILLEALNELPAPEPPTDAPLRLPIQDVYTISGIGTVPVGRVETGILNTGDNVSFQPSDVSGEV 267
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.916e-54 Identity = 107/240 (44.58%), Postives = 151/240 (62.92%), Query Frame = 1 Query: 4 RFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714 ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ V F+P SG G+N+I RS + + WYKG LL+ +D+ P+R DKP RL + DV+K G G G++E G ++ G + P T V Sbjct: 294 KYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSRSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTV 531
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.916e-54 Identity = 104/226 (46.02%), Postives = 146/226 (64.60%), Query Frame = 1 Query: 4 RFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ V F+P SG G+N+ RS + D WYKG LL+ +D+ P+R DKP RL + DV+K G G G++E G ++ G Sbjct: 292 KYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTARSQSSDLTTWYKGMCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTG 515
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.502e-54 Identity = 104/226 (46.02%), Postives = 146/226 (64.60%), Query Frame = 1 Query: 4 RFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLD---WYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTREH LL +LGV Q+ NKMD + + R+ EI ++ +LK+ G+ V F+P SG G+N+ RS + D WYKG LL+ +D+ P+R DKP RL + DV+K G G G++E G ++ G Sbjct: 289 KYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQV--NWQQERFQEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLTSRSQSSDLTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQTG 512 The following BLAST results are available for this feature:
BLAST of DC900195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900195 ID=DC900195; Name=DC900195; organism=Citrus sinensis; type=EST; length=770bpback to top |