DC900195

Overview
NameDC900195
Unique NameDC900195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_YERP3 (Sulfate adenylyltransferase subunit 1 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=cysN PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.477e-30
Identity = 75/222 (33.78%), Postives = 123/222 (55.41%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVS 717
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ +A  LG++ ++   NKMD     + ++ + +   +  S+ +++  + + + FVP+S  +GDN+   S  +DWY GPTLL+ L++++       +PLR P+Q V +         G +  GV+  G  V   PSG+ + V+
Sbjct:   82 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFIATLLGIRHLVVAVNKMDLV--GFQESVFTQFKDDYLSFAEQLPTDLD-IKFVPLSALDGDNVASPSEKMDWYSGPTLLEILESVDVVNARRQQPLRFPVQYVNRPNLDFRGYAGTLSAGVVWVGQKVKVLPSGVESTVA 293          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_VIBF1 (Sulfate adenylyltransferase subunit 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=cysN PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.477e-30
Identity = 76/222 (34.23%), Postives = 122/222 (54.95%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVS 717
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  + AV++ID+  G  +       QTR H+ +A  LG++  +   NKMD    +YS++R++EI +E  ++ KK+      +  +P+S  EGDN++  S  L WY+G  LL+ L+N++      +   R P+Q V +         G V +G +  G  +   PSG  ++V+
Sbjct:   78 ALLVDGLQAEREQGITIDVAYRYFSTQKRKFIIADTPGHEQYTRNMATGASTCNVAVILIDARKGVLD-------QTRRHSYIANLLGIRHFVVAVNKMDLV--EYSQSRFEEIKEEYLAFSKKLNNPNLDISILPLSALEGDNVVNPSDALSWYQGEPLLEVLENVDIDADKGNGEFRFPVQYVNRPNLDFRGFAGTVSSGGISVGDEIVALPSGKKSKVA 290          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_SALNS (Sulfate adenylyltransferase subunit 1 OS=Salmonella newport (strain SL254) GN=cysN PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.929e-30
Identity = 74/222 (33.33%), Postives = 125/222 (56.31%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVS 717
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID+  G  +       QTR H+ ++  LG+K ++   NKMD     Y +  +  I ++  ++ +++  + + + FVP+S  EGDN+  +S N+ W+ GPTLL+ L+ ++  +    +P+R P+Q V +         G + +G +K G  +   PSG+ + V+
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLV--DYREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANMRWHSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVA 290          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_AQUAE (Elongation factor Tu OS=Aquifex aeolicus GN=tufA PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.519e-30
Identity = 82/214 (38.32%), Postives = 118/214 (55.14%), Query Frame = 1
Query:   37 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672
            + FKY  + DK   E+ERGITI+I   ++ET K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  + V  ++   NK D       +   + +  EV   L K  Y  ++VP +  S       +E+++   W +    LL+A+D  I  P+R  DKP  +P++DV+ I G GTV  GRVE GVL+PG
Sbjct:   47 KCFKYEEI-DKAPEEKERGITINITHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHVLLARQVNVPYIVVFMNKCDMVD---DEELLELVELEVRELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVESIKELLNAMDEYIPTPQREVDKPFLMPIEDVFSISGRGTVVTGRVERGVLRPG 249          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_SULNB (Sulfate adenylyltransferase subunit 1 OS=Sulfurovum sp. (strain NBC37-1) GN=cysN PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.519e-30
Identity = 75/221 (33.94%), Postives = 122/221 (55.20%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM+TG S AD A+++ID+  G          QTR H+ +   LG++ +I   NKMD     +S+  +D+I     +   ++G   +   ++P+S  EGDN+++RS    W+ G  LL  LD+++  K P ++  R P+Q V +         G +  G+++ G  +T  PSG TT+V
Sbjct:   76 ALLVDGLQSEREQGITIDVAYRFFATEKRKFIIADTPGHEQYTRNMVTGASTADVAIILIDARKGILT-------QTRRHSFIVNLLGIEHVIVAINKMDLV--DFSEEVFDKISGAYGALADELGI--KNTYYIPVSALEGDNVVDRSKRSPWFSGQPLLGLLDSMDISKEPKEEDFRFPVQYVNRPNLDFRGFCGTIAAGLVRTGDEITVLPSGKTTKV 285          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_THESQ (Elongation factor Tu OS=Thermotoga sp. (strain RQ2) GN=tuf PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.297e-30
Identity = 88/220 (40.00%), Postives = 119/220 (54.09%), Query Frame = 1
Query:   61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            +DK   E+ RGITI+I   +++T K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK D           D +  EV   L + GY  ++VP +  S  +         N + YK    LLDA+DN I EP+R  DKP  +P++DV+ I G GTV  GR+E G +KPG  V     GL+ E+
Sbjct:   50 IDKAPEEKARGITINITHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVIRGSALKAVE-APNDPNHEAYKPIQELLDAMDNYIPEPQREVDKPFLMPIEDVFSITGRGTVVTGRIERGRIKPGDEVEI--IGLSYEI 256          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_THEP1 (Elongation factor Tu OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=tuf PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.297e-30
Identity = 88/220 (40.00%), Postives = 119/220 (54.09%), Query Frame = 1
Query:   61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            +DK   E+ RGITI+I   +++T K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK D           D +  EV   L + GY  ++VP +  S  +         N + YK    LLDA+DN I EP+R  DKP  +P++DV+ I G GTV  GR+E G +KPG  V     GL+ E+
Sbjct:   50 IDKAPEEKARGITINITHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVIRGSALKAVE-APNDPNHEAYKPIQELLDAMDNYIPEPQREVDKPFLMPIEDVFSITGRGTVVTGRIERGRIKPGDEVEI--IGLSYEI 256          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_FERIS (Elongation factor Tu OS=Fervidobacterium islandicum GN=tuf PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.297e-30
Identity = 81/207 (39.13%), Postives = 113/207 (54.59%), Query Frame = 1
Query:   58 VLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM 675
            ++DK   ER RGITI+I   +++T K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK+D   P+      D +  EV   L K  +  ++VP V  S  +         +  +     LLDA+D    +P R  DKP  +P++DV+ I G GTV  GR+E GV+KPG+
Sbjct:   49 MIDKAPEERARGITINITHVEYQTEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVLAATDGPMP-------QTREHVLLARQVNVPAMIVFINKVDMVDPEL----VDLVEMEVRDLLSKYEFPGDEVPVVRGSALKAIEAPNDPNDPAYKPIKELLDAMDTYFPDPVREVDKPFLMPIEDVFSITGRGTVVTGRIERGVIKPGV 244          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_TERTT (Sulfate adenylyltransferase subunit 1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=cysN PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.297e-30
Identity = 79/221 (35.75%), Postives = 119/221 (53.85%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D AV++ID+  G          QTR H+ +A  LG+K ++   NKMD    ++S++R++EI +      K +  NP ++ FVP+S  +GDN++  S    WY G +L+  L+ +      +    R P+Q V +         G V +GV+K G  V   PSG T+ V
Sbjct:   76 ALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAVILIDARYG-------VQTQTRRHSYIASLLGIKHVVVAINKMDLV--EFSESRFEEIKQSYLDLSKSL--NPAELHFVPMSALDGDNVVNISERTPWYSGKSLMQILETVEIASDKNADDFRFPVQFVNRPNLNFRGFCGTVASGVVKVGDKVKALPSGKTSTV 285          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_AQUPY (Elongation factor Tu OS=Aquifex pyrophilus GN=tuf PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.613e-30
Identity = 82/214 (38.32%), Postives = 117/214 (54.67%), Query Frame = 1
Query:   37 RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672
            + FKY  + DK   E+ERGITI+I   ++ET K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  + V  ++   NK D       +   + +  EV   L K  Y  ++VP +  S       +E+++   W      LL+A+D  I  P+R  DKP  +P++DV+ I G GTV  GRVE GVL+PG
Sbjct:   47 KCFKYEEI-DKAPEEKERGITINITHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHVLLARQVNVPYIVVFMNKCDMVD---DEELLELVELEVRELLSKYEYPGDEVPVIRGSALGALQELEQNSPGKWVGSIKELLNAMDEYIPTPEREVDKPFLMPIEDVFSISGRGTVVTGRVERGVLRPG 249          
The following BLAST results are available for this feature:
BLAST of DC900195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_YERP31.477e-3033.78Sulfate adenylyltransferase subunit 1 OS=Yersinia ... [more]
CYSN_VIBF11.477e-3034.23Sulfate adenylyltransferase subunit 1 OS=Vibrio fi... [more]
CYSN_SALNS1.929e-3033.33Sulfate adenylyltransferase subunit 1 OS=Salmonell... [more]
EFTU_AQUAE2.519e-3038.32Elongation factor Tu OS=Aquifex aeolicus GN=tufA P... [more]
CYSN_SULNB2.519e-3033.94Sulfate adenylyltransferase subunit 1 OS=Sulfurovu... [more]
EFTU_THESQ4.297e-3040.00Elongation factor Tu OS=Thermotoga sp. (strain RQ2... [more]
EFTU_THEP14.297e-3040.00Elongation factor Tu OS=Thermotoga petrophila (str... [more]
EFTU_FERIS4.297e-3039.13Elongation factor Tu OS=Fervidobacterium islandicu... [more]
CYSN_TERTT4.297e-3035.75Sulfate adenylyltransferase subunit 1 OS=Teredinib... [more]
EFTU_AQUPY5.613e-3038.32Elongation factor Tu OS=Aquifex pyrophilus GN=tuf ... [more]

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Properties
Property NameValue
Genbank descriptionDC900195 VSS Citrus sinensis cDNA clone VS28233 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900195 ID=DC900195; Name=DC900195; organism=Citrus sinensis; type=EST; length=770bp
GAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGACAATA
TCAATGAGCCAAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAG
GACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGA
GACCGGTGTCCTCAAGCCTGGTATGGNGGTGACATTTGGCCCCTCTGGAT
TGACAACTGAGGTAAGTCTGTTGAGATGCACCACGAGCTNTGCAGGAGGC
CTTCCGGTGACATGTTGGCT
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