DC900195

Overview
NameDC900195
Unique NameDC900195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_SACD2 (Sulfate adenylyltransferase subunit 1 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cysN PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.613e-30
Identity = 77/221 (34.84%), Postives = 120/221 (54.30%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     YS+  ++ I +      K +G   E + FVP+S  +GDN++ +S N+ WY G +L++ L+++      + K  R P+Q V +         G V +G +K G  +   PSG T++V
Sbjct:   76 ALLVDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDMAIILIDARHGVMT-------QTRRHSFIASLLGIKHLVIAINKMDLV--DYSQETFESIKQAYGEVAKTLG--QENLYFVPMSALDGDNVVNKSENMPWYTGESLMEILESVQITGAKNLKDFRYPVQYVNRPHLNFRGFCGTVASGEVKVGDEIRVLPSGKTSKV 285          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_CELJU (Sulfate adenylyltransferase subunit 1 OS=Cellvibrio japonicus (strain Ueda107) GN=cysN PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.613e-30
Identity = 79/221 (35.75%), Postives = 121/221 (54.75%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            A ++D L+AERE+GITID+A   F T+K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +A  LG+K ++   NKMD     ++++ ++ I  +  ++  K+G   + V FVPIS  +GDN++ RS    WYKG TL++ L+ +      +    R P+Q V +         G V +GV+K G  V   PSG T+ V
Sbjct:   76 ALLVDGLQAEREQGITIDVAYRYFSTSKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARHGVMT-------QTRRHSYIASLLGIKHIVVAINKMDLL--DFNESVFENIKADYLAFAAKLGM--KDVMFVPISALDGDNVVNRSEKSAWYKGQTLMEILETVPIAGDKNYTDFRFPVQYVNRPNLDFRGFCGNVASGVVKVGDEVRVLPSGKTSHV 285          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSNC_XYLFA (Bifunctional enzyme cysN/cysC OS=Xylella fastidiosa GN=cysNC PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.613e-30
Identity = 82/227 (36.12%), Postives = 119/227 (52.42%), Query Frame = 1
Query:   49 YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQ-----DVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            YA +LD L AERE+GITID+A   F+T K    V D PGH  + +NM TG S AD AV+++D+  G          QTR H+ +   LG++ ++   NKMD     Y +  ++ I  +  +   K+G N  +V  +P+S  EGDN+ +RS  + WY GP+LL+ L+ +          + LP+Q     D    G  GT+  GRV     +PG  V   PSG  + V
Sbjct:   67 YALLLDGLAAEREQGITIDVAYRYFDTEKRKFIVADCPGHAQYTRNMATGASTADAAVVLVDARKGLLT-------QTRRHSYIVALLGIRHVVLAVNKMDLV--GYDQETFEAIASDYLALAAKLGIN--QVQCIPLSALEGDNLSKRSARMPWYVGPSLLEYLEALEPADVDLAAAMCLPVQWVNRPDSQFRGFTGTLAAGRV-----RPGDAVVVLPSGCVSRV 277          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: NODQ_RHIS3 (Bifunctional enzyme nodQ OS=Rhizobium sp. (strain N33) GN=nodQ PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.330e-30
Identity = 78/245 (31.84%), Postives = 131/245 (53.47%), Query Frame = 1
Query:    7 FEKEAAEMNKRSFK---------YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            FE + A + + S K         +A ++D L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD A+++ID+  G          QTR H+++A  LG++ ++   NK+D     + +A ++ I +    + + +G+  + +  +P+S   GDN+  RS +++WY GPTL++ L+ ++  +   + P R P+Q V +         G V +G + PG  V    SG ++ V
Sbjct:   55 FEDQLAALERDSRKHGTTGDDIDFALLVDGLEAEREQGITIDVAYRFFATPKRKFIVADTPGHEQYTRNMATGASTADLAIVLIDARQGVLR-------QTRRHSIIASLLGIRHIVLAVNKIDLV--GFDQAVFERITESYRQFSRDLGF--QTIVPIPMSARYGDNVTSRSESMEWYSGPTLIEHLETVSVEEAVVELPFRFPVQYVNRPNLDFRGFAGTVASGSVAPGDEVVVAKSGKSSRV 288          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_THEMA (Elongation factor Tu OS=Thermotoga maritima GN=tuf PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 9.573e-30
Identity = 87/220 (39.55%), Postives = 119/220 (54.09%), Query Frame = 1
Query:   61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            +DK   E+ RGITI+I   ++ET K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK D           D +  EV   L + GY  ++VP +  S  +         N + YK    LLDA+DN I +P+R  DKP  +P++DV+ I G GTV  GR+E G ++PG  V     GL+ E+
Sbjct:   50 IDKAPEEKARGITINITHVEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVEVPYMIVFINKTDMVD---DPELIDLVEMEVRDLLSQYGYPGDEVPVIRGSALKAVE-APNDPNHEAYKPIQELLDAMDNYIPDPQRDVDKPFLMPIEDVFSITGRGTVVTGRIERGRIRPGDEVEI--IGLSYEI 256          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_SODGM (Sulfate adenylyltransferase subunit 1 OS=Sodalis glossinidius (strain morsitans) GN=cysN PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.573e-30
Identity = 76/222 (34.23%), Postives = 118/222 (53.15%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVS 717
            A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+L+ID   G  +       QTR H+ ++  LG++ ++   NKMD     + +  +  I ++   + +++  + + + FVP+S  EGDN+      + WY GPTLLD L+ +        +P R P+Q V +         G V  GVL+ G  V   PSG+T+ +S
Sbjct:   79 ALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDVAILLIDVRKGVLD-------QTRLHSFISTLLGIRHLVVAVNKMDLVA--FDEQIFQGIRQDYLRFAEQLPVDLD-ITFVPLSALEGDNVAALGKAMPWYNGPTLLDVLETVEVINLNEQQPARFPVQYVNRPNLDFRGYAGTVAAGVLRVGQAVKVLPSGVTSTIS 290          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_SHEON (Sulfate adenylyltransferase subunit 1 OS=Shewanella oneidensis GN=cysN PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.573e-30
Identity = 77/221 (34.84%), Postives = 120/221 (54.30%), Query Frame = 1
Query:   52 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEV 714
            A ++D L+AERE+GITID+A   F + K    + D PGH  + +NM TG S  D AV+++D+  G          QT+ HA +A  LG++  +   NKMD     + +  ++ I  + S ++K  G+    + FVP+S   GDN++E S +  WY+G TLL+ L+ I+  +  S  P R P+Q V +         G + +GV+K G  V   PSG  ++V
Sbjct:   74 ALLVDGLQAEREQGITIDVAYRYFSSDKRKFIIADTPGHEQYTRNMATGASTCDLAVILVDARYG-------VQTQTKRHAFIASLLGIRHFVVAINKMDLL--GFDEQVFNRIRNDFSEFVK--GFGELDIHFVPLSALNGDNVVEPSLHTPWYQGGTLLELLETIDTQRELSALPARFPVQYVSRPNLDFRGFAGTLASGVIKVGDQVVALPSGKRSKV 283          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_THEM4 (Elongation factor Tu OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=tuf PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29
Identity = 83/220 (37.73%), Postives = 118/220 (53.64%), Query Frame = 1
Query:   61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVS 717
            +DK   E+ERGITI+IA  ++ET K +   ID PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  + V  MI   NK D       +   D +  EV   L K  +  + +P +  S  +         +  +     LLD +D    EP+R +DKP  +P++DV+ I G GTV  GR+E GV++PG  V     G++ EV+
Sbjct:   50 IDKAPEEKERGITINIAHIEYETEKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVNVPAMIVFINKTDMVD---DEELVDLVEMEVRELLNKYEFPGDDLPVIRGSALKAVEASNDPNDEAYAPIKELLDTMDEYFPEPQRETDKPFLMPVEDVFSITGRGTVVTGRIERGVIRPGDEVEI--VGMSYEVN 257          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_RHITR (Sulfate adenylyltransferase subunit 1 OS=Rhizobium tropici GN=cysN PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29
Identity = 81/224 (36.16%), Postives = 121/224 (54.02%), Query Frame = 1
Query:   49 YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMI-ERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVS 717
            +A +LD L+AERE+GITID+A   F T K    V D PGH  + +NM TG S AD AVL++D+  G  E       QTR HA +A  LG+KQ +   NK+D T   Y +A +++I  +   +   +G   +++  +P+S  +G+N++      + WY GPTL++ L+ +   +       RL +Q V + G       G V  G +KPG  V   PSG+   VS
Sbjct:   77 FALLLDGLQAEREQGITIDVAYRYFSTDKRSFIVADTPGHEQYTRNMATGASTADLAVLLVDARMGILE-------QTRRHATIASLLGIKQFVLAINKIDLT--NYDRAGFEKISHDFREFALSLGV--KQITAIPMSALKGENVVYSGQAAMPWYTGPTLVETLE-LATVRSAQAVGFRLSVQRVSRPGESFRGYQGTVAGGSVKPGDSVMILPSGMVANVS 288          
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: CYSN_AGRRK (Sulfate adenylyltransferase subunit 1 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=cysN PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.250e-29
Identity = 80/224 (35.71%), Postives = 120/224 (53.57%), Query Frame = 1
Query:   49 YAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMI-ERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXVTFGPSGLTTEVS 717
            +A +LD L+AERE+GITID+A   F T      V D PGH  + +NM TG S AD A+L+ID+  G  E       QTR HA +A  LG+KQ +   NK+D T   Y +A +++I  +   +   +G   +++  +P+S  +G+N++      + WY GPTL++ L+ +   +       RL +Q V + G       G V  G +KPG  V   PSG+   VS
Sbjct:   77 FALLLDGLQAEREQGITIDVAYRYFSTDNRSFIVADTPGHEQYTRNMATGASTADLAILLIDARLGILE-------QTRRHATIASLLGIKQFVLAVNKIDLT--NYDRAGFEKIAHDFREFALSLGV--KQITAIPMSALKGENVVYSGQAAMPWYNGPTLVETLE-LATVRSAQSVGFRLSVQRVSRPGESFRGYQGTVAGGSVKPGDSVMILPSGMVANVS 288          
The following BLAST results are available for this feature:
BLAST of DC900195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSN_SACD25.613e-3034.84Sulfate adenylyltransferase subunit 1 OS=Saccharop... [more]
CYSN_CELJU5.613e-3035.75Sulfate adenylyltransferase subunit 1 OS=Cellvibri... [more]
CYSNC_XYLFA5.613e-3036.12Bifunctional enzyme cysN/cysC OS=Xylella fastidios... [more]
NODQ_RHIS37.330e-3031.84Bifunctional enzyme nodQ OS=Rhizobium sp. (strain ... [more]
EFTU_THEMA9.573e-3039.55Elongation factor Tu OS=Thermotoga maritima GN=tuf... [more]
CYSN_SODGM9.573e-3034.23Sulfate adenylyltransferase subunit 1 OS=Sodalis g... [more]
CYSN_SHEON9.573e-3034.84Sulfate adenylyltransferase subunit 1 OS=Shewanell... [more]
EFTU_THEM41.250e-2937.73Elongation factor Tu OS=Thermosipho melanesiensis ... [more]
CYSN_RHITR1.250e-2936.16Sulfate adenylyltransferase subunit 1 OS=Rhizobium... [more]
CYSN_AGRRK1.250e-2935.71Sulfate adenylyltransferase subunit 1 OS=Agrobacte... [more]

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Properties
Property NameValue
Genbank descriptionDC900195 VSS Citrus sinensis cDNA clone VS28233 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900195 ID=DC900195; Name=DC900195; organism=Citrus sinensis; type=EST; length=770bp
GAGAGGTTCGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTA
CGCCTGGGTGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCA
TTGATATTGCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTC
ATTGATGCTCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTAC
CTCACAGGCTGACTGTGCCGTCCTTATCATTGACTCCACCACCGGTGGTT
TTGAAGCTGGTATCTCCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTT
GCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGA
CGCCACCACCCCCAAGTACTCAAAGGCTAGGTACGATGAAATTGTGAAGG
AGGTCTCTTCCTACCTGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCA
TTCGTGCCCATCTCTGGTTTCGAGGGTGACAACATGATTGAGAGGTCTAC
CAACCTTGACTGGTACAAGGGTCCAACCCTGCTGGACGCTCTTGACAATA
TCAATGAGCCAAAGAGGCCCTCAGACAAGCCCCTTCGTCTGCCACTCCAG
GACGTGTACAAGATTGGTGGCATTGGAACCGTCCCAGTGGGTCGCGTTGA
GACCGGTGTCCTCAAGCCTGGTATGGNGGTGACATTTGGCCCCTCTGGAT
TGACAACTGAGGTAAGTCTGTTGAGATGCACCACGAGCTNTGCAGGAGGC
CTTCCGGTGACATGTTGGCT
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