DC900195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_STROR (Elongation factor Tu OS=Streptococcus oralis GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 75/206 (36.41%), Postives = 114/206 (55.34%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 666 +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E L++ +D I EP+R ++KPL LP++DV+ I G GTV GR++ G ++ Sbjct: 53 IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDII-------MELMNTVDEYIPEPERDTEKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_PELPB (Elongation factor Tu OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 76/206 (36.89%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 666 +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P V + EGD E++ L+DA+D+ I +P R DKP +P++DV+ I G GTV GR+E G +K Sbjct: 50 IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPSLVVFLNKVDIADPEL----IELVELELRELLTQYNFPGDDIPIVKGSALKALEGDPEGEKAI-------MELMDAVDSFIPDPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIK 237
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_NOCFA (Elongation factor Tu OS=Nocardia farcinica GN=tuf PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 79/206 (38.35%), Postives = 115/206 (55.83%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ E+ P V +SG EGD W K L+DA+D +I +P R +DKP +P++DV+ I G GTV GRVE G++ Sbjct: 52 IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEEILELVEMEVRELLAAQEFD-EEAPVVRVSGLKALEGDP--------KWVKSVEDLMDAVDESIPDPVRETDKPFLMPIEDVFTITGRGTVVTGRVERGII 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_MOOTA (Elongation factor Tu OS=Moorella thermoacetica (strain ATCC 39073) GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 76/206 (36.89%), Postives = 111/206 (53.88%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + EV L + + +++P V S + +W K L+DA+D+ I P+R +DKP +P++DV+ I G GTV GRVE G +K G Sbjct: 50 IDKAPEERERGITIATAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDQVD---DPELLELVEMEVRELLTEYEFPGDEIPIVTGSALKAMECGCGKRECEWCGKVWELMDAVDSYIPTPERDTDKPFLMPIEDVFTITGRGTVTTGRVERGKVKVG 245
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_FRAAA (Elongation factor Tu OS=Frankia alni (strain ACN14a) GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 76/209 (36.36%), Postives = 112/209 (53.59%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 666 +DK E+ RGITI IA +++T K + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + + EV L + + VP + +S EGD +W G LL+ + D+I EP+R D+P +P++DV+ I G GTV GRVE G++K Sbjct: 52 IDKAPEEKARGITISIAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSSYEFPGDDVPVIRVSALKALEGDK--------EW--GAKLLELMAAVDDSIPEPQRDIDRPFLMPIEDVFTITGRGTVVTGRVERGIVK 240
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_ERYLH (Elongation factor Tu OS=Erythrobacter litoralis (strain HTCC2594) GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 74/208 (35.58%), Postives = 114/208 (54.81%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 +DK ERERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++++ G QTREH LL+ +GV ++ NK+D + + + EV L + ++ + +P V ++ EG R N+ L+ A+D +I +P+RP D+ +P++DV+ I G GTV GRVETGV+ G Sbjct: 50 IDKAPEERERGITISTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMP-------QTREHILLSRQVGVPALVVYLNKVDQVD---DEELLELVELEVRELLSEYDFDGDNIPIVKGSALAALEG-----RDDNIGKESIVELMKAVDEHIPQPERPVDQDFLMPIEDVFSISGRGTVVTGRVETGVVNVG 242
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_DESDG (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain G20) GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 78/207 (37.68%), Postives = 112/207 (54.11%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP--TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 +DK E+ERGITI A ++ETT + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L + + P + S + +E + D P LLDA D+ I EP+R +DKP +P++DV+ I G GTV GRVE G++K G Sbjct: 50 IDKAPEEKERGITIATAHVEYETTLRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPSIVVFLNKCDMVD---DEELLELVELEVRELLSSYDFPGDDTPVIRGSALKA---LECDSADDDAAKPILELLDACDSYIPEPERDTDKPFLMPIEDVFSISGRGTVVTGRVERGIIKVG 243
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU2_PELTS (Elongation factor Tu 2 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf2 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 78/219 (35.62%), Postives = 113/219 (51.60%), Query Frame = 1 Query: 22 AEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP-TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 A + K K +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D D V+E+ S + G +++P + S + +W K L+DA+D I P+R DKP +P++DV+ I G GTV GR+E G +K G Sbjct: 37 ATVGKAQVKKYDKIDNAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVYLNKADMVDDPELLELVDMEVRELLSTYEFPG---DEIPIITGSALKAMECACGKRECEWCKSIWELMDAVDEYIPTPQRAVDKPFLMPVEDVFSITGRGTVATGRIERGQVKVG 245
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU1_PELTS (Elongation factor Tu 1 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.586e-27 Identity = 78/219 (35.62%), Postives = 113/219 (51.60%), Query Frame = 1 Query: 22 AEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP-TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 A + K K +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D D V+E+ S + G +++P + S + +W K L+DA+D I P+R DKP +P++DV+ I G GTV GR+E G +K G Sbjct: 37 ATVGKAQVKKYDEIDNAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVYLNKADMVDDPELLELVDMEVRELLSTYEFPG---DEIPIITGSALKAMECACGKRECEWCKSIWELMDAVDEYIPTPQRAVDKPFLMPVEDVFSITGRGTVATGRIERGQVKVG 245
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_YEAST (Elongation factor Tu, mitochondrial OS=Saccharomyces cerevisiae GN=TUF1 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.907e-27 Identity = 79/222 (35.59%), Postives = 116/222 (52.25%), Query Frame = 1 Query: 19 AAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 AA+ YA +DK ER RGITI A ++ET K + + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV+ ++ NK+D + + E+ L + G++ + P + + EG R + LLDA+D I P+R +KP +P++D++ I G GTV GRVE G LK G Sbjct: 73 AAKGGANFLDYA-AIDKAPEERARGITISTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMP-------QTREHLLLARQVGVQHIVVFVNKVDTID---DPEMLELVEMEMRELLNEYGFDGDNAPIIMGSALCALEG-----RQPEIGEQAIMKLLDAVDEYIPTPERDLNKPFLMPVEDIFSISGRGTVVTGRVERGNLKKG 278 The following BLAST results are available for this feature:
BLAST of DC900195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900195 ID=DC900195; Name=DC900195; organism=Citrus sinensis; type=EST; length=770bpback to top |