DC900195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 75/203 (36.95%), Postives = 110/203 (54.19%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 666 +DK E+ RGITI IA +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD S L++A+D NI EP R +DKP +P++DV+ I G GTV GR+E GV+K Sbjct: 52 IDKAPEEKARGITISIAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRVSALKALEGDEKWADSI-------IELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGTVVTGRIERGVVK 240
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_PELPD (Elongation factor Tu OS=Pelobacter propionicus (strain DSM 2379) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 78/224 (34.82%), Postives = 115/224 (51.34%), Query Frame = 1 Query: 13 KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXV 681 K A + FK +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P V S + + + L L+DA+D+ I +P+R DKP +P++DV+ I G GTV GRVE G++K G V Sbjct: 34 KVLAGKGQAEFKAFDQIDNAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVYLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIVKGSALKA--LEGEKSELGEDSIIKLMDAVDSYIPDPERAVDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEV 245
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSS (Elongation factor Tu OS=Mycobacterium sp. (strain MCS) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSK (Elongation factor Tu OS=Mycobacterium sp. (strain KMS) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_MYCSJ (Elongation factor Tu OS=Mycobacterium sp. (strain JLS) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 79/206 (38.35%), Postives = 114/206 (55.34%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E P V +S EGD W K L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADAVD---DEELIELVEMEVRELLAAQDFD-EDAPVVRVSALKALEGDE--------KWVKSVEELMDAVDESIPDPVRDTDRPFLMPVEDVFTITGRGTVVTGRVERGVV 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 79/206 (38.35%), Postives = 115/206 (55.83%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 663 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E+ P V +S EGD W K L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE GV+ Sbjct: 52 IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELIELVEMEVRELLAAQDFD-EEAPVVRVSALKALEGDP--------KWVKSVEELMEAVDASIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVI 238
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_GLUDA (Elongation factor Tu OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 78/225 (34.67%), Postives = 115/225 (51.11%), Query Frame = 1 Query: 13 KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGF----EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 K A+ +FK +D ER RGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + EV L + + +P + S +GD + + D L+DA+D I +P+RP D+P +P++DV+ I G GTV GRVE GV+ G Sbjct: 34 KTLAKTGGATFKAYDQIDAAPEERARGITISTAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKVDQVD---DPELLELVEMEVRELLSAYQFPGDDIPIIKGSALVTLEDGDPEVGENRVRD------LMDAVDAYIPQPERPVDRPFLMPIEDVFSISGRGTVVTGRVERGVVNVG 242
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 81/209 (38.76%), Postives = 111/209 (53.11%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXV 681 +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ + VP V S + + N D K LL A D+ I EP+R DKP +P++DV+ I G GTV GRVE GV+K G V Sbjct: 50 IDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCDMVD---DEELLELVELEVRELLTSYGFPGDDVPVVRGSALKA--LESDDPNSDACKPIRELLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEV 246
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 81/209 (38.76%), Postives = 111/209 (53.11%), Query Frame = 1 Query: 61 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMXV 681 +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L G+ + VP V S + + N D K LL A D+ I EP+R DKP +P++DV+ I G GTV GRVE GV+K G V Sbjct: 50 IDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPYIVVFLNKCDMVD---DEELLELVELEVRELLTSYGFPGDDVPVVRGSALKA--LESDDPNSDACKPIRELLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEV 246
BLAST of DC900195 vs. ExPASy Swiss-Prot
Match: EFTU_BRASO (Elongation factor Tu OS=Bradyrhizobium sp. (strain ORS278) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.294e-26 Identity = 76/224 (33.93%), Postives = 113/224 (50.45%), Query Frame = 1 Query: 13 KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 672 K AE +F +DK E+ RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L K + +K+P + S ++ D +L+ + N++E P+RP D+P +P++DV+ I G GTV GRVE GV+K G Sbjct: 34 KILAETGGATFTAYDQIDKAPEEKARGITISTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPALVVFLNKCDMVD---DPELLELVELEVRELLSKYEFPGDKIPIIKGSALAALEDSDKKLGHD-----AILELMRNVDEYIPQPERPIDQPFLMPVEDVFSISGRGTVVTGRVERGVIKVG 242 The following BLAST results are available for this feature:
BLAST of DC900195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900195 ID=DC900195; Name=DC900195; organism=Citrus sinensis; type=EST; length=770bpback to top |