DC900193

Overview
NameDC900193
Unique NameDC900193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1131
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 1.218e-19
Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVVIXDCGQL 551
            ESIYG KF DENF  K    G+LSMANAG  TNGSQFF+ T  T  LDGKHVVFGQV++G+ V + +  V     +  K  VI +CG+L
Sbjct:   96 ESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.591e-19
Identity = 52/107 (48.60%), Postives = 65/107 (60.75%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPV---VIXDCGQL 596
            MCQ           GESIYG KF DENF      P +LSMANAG  TNGSQFF+ T  T  L+GKHVVFG+V++G  +V+ + +     G  +KPV   +I DCG+L
Sbjct:   73 MCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLER--CDKGENDKPVEDWIISDCGEL 177          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.591e-19
Identity = 50/90 (55.56%), Postives = 59/90 (65.56%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNK-PVVIXDCGQL 551
            ESIYG KF DENF  K   P  LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG D+V AI    + +    K  + I D G++
Sbjct:  104 ESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGEI 193          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.591e-19
Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = -2
Query:  309 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPV 551
            +SIYG KFADENF  +    G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG ++V  I  V    GR+++PV
Sbjct:  107 KSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENV--PKGRSDRPV 185          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 3.545e-19
Identity = 49/90 (54.44%), Postives = 61/90 (67.78%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSG-RTNKPVVIXDCGQL 551
            +SIYG KFADENF  +    G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+ I  V    G +  + V I   GQ+
Sbjct:  108 KSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQI 197          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.630e-19
Identity = 50/90 (55.56%), Postives = 61/90 (67.78%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPVV-IXDCGQL 551
            +SIYG KF DENF  +    G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+AI  V    G   + VV I   G+L
Sbjct:   92 KSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 6.047e-19
Identity = 55/108 (50.93%), Postives = 63/108 (58.33%), Query Frame = -2
Query:  285 MCQXXXXXXXXXXXGESIYGSK-FADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAI--XKVG-SSSGRTNKPVVIXDCGQL 596
            MCQ              I+G K F DENF  K   PG+LSMANAGP TNGSQFF+ T  T +LD KHVVFG+V EGMDVVK +   K G       N  VVI  CG++
Sbjct:   75 MCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKMEATKTGYRGKDMPNLDVVISQCGEM 182          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 6.047e-19
Identity = 51/91 (56.04%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAI--XKVGSSSGRTNKPVVIXDCGQL 551
            +SIYG KF DENF  K    G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG DVV+ I   K G       +P+ I   G+L
Sbjct:  107 KSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIENTKTGPRDAPA-EPIKIAKSGEL 196          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.031e-18
Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = -2
Query:  282 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGS-SSGRTNKPVVIXDCGQLS 551
            ESIYG KF DE+   K   P +LSMANAG  TNGSQFF+ T  T  LDGKHVVFG+V++G  VV+ +  V + +S R  + V I DCG+L+
Sbjct:   97 ESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKIVDCGELT 187          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.031e-18
Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = -2
Query:  309 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKPV 551
            +SIYG +F DENF  K    G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG ++++ I    S +G  ++PV
Sbjct:  107 KSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIE--NSKTGAADRPV 185          
The following BLAST results are available for this feature:
BLAST of DC900193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
PPID_HUMAN1.218e-1955.0640 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_DEBHA1.591e-1948.60Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIB_YARLI1.591e-1955.56Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_ASPNG1.591e-1958.02Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ASPFU3.545e-1954.44Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ASPOR4.630e-1955.56Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIH_GIBZE6.047e-1950.93Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIB_NEUCR6.047e-1956.04Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPID_USTMA1.031e-1853.85Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
PPIB_GIBZE1.031e-1855.56Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]

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Properties
Property NameValue
Genbank descriptionDC900193 VSS Citrus sinensis cDNA clone VS28229 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900193 ID=DC900193; Name=DC900193; organism=Citrus sinensis; type=EST; length=1131bp
CGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAA
GACAAGCCCTATNTTATTTAAAANGGCAGCTCATAGAAAGACATAAAAAA
CAGTTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAACAAGTAA
CATAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACNCGGCCACA
TAATAATAGATAACATAATCACCATCACGATCGCGATCAGACGGCTCGNG
ATGATGGCGATCATTATCATGATCAAATCTAAGACAATTGACCGCAATCA
GNGATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCACTTTNTC
GATGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAACACAACGT
GCTTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAACTGAGAT
CCGTTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGN
GNGCTTNTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGTAGATTGATT
CGCCTCCGGTTCCGTTTCCGGCGGTGAAGTCTCCCCCCTGGCACATGCTC
GTGCCGAATTCGGCACGAGGTTTCGTACAATAAAGAGCCCTCTATTTCCA
GTTTTAAATTCCAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGC
AACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTA
TGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTG
TCATGGACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCGGCCCC
ACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACAC
ATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTT
AAGAATAATGTAAGGGTGATTAAAAAAAAAGAAAAATTCTCTACTTCGTT
TTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCAC
CCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGTAATATAT
GGCCATGGCCATGACCGTGGCCTTGTGTGGT
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