DC900193

Overview
NameDC900193
Unique NameDC900193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1131
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.056e-15
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = -2
Query:  330 SIYGSKFADENFVX-KXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSS 548
            SIYG +F DE     K  G GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   76 SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.056e-15
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = -2
Query:  330 SIYGSKFADENFVX-KXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSS 548
            SIYG +F DE     K  G GIL+MANAGP TNGSQFFV  A T+WLDGKH +FG+V +G+ +V  +  V ++S
Sbjct:   76 SIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNS 149          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus fumigatus GN=cyp1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.056e-15
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = -2
Query:  330 SIYGSKFADENFVX-KXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSS 548
            SIYG KF DE     K  G G+LSMAN+GP TNGSQFF+  A T WLDGKH +FG+V  GM V++ +  V ++S
Sbjct:   67 SIYGEKFEDEIHPGLKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNS 140          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIL1_SCHPO (Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizosaccharomyces pombe GN=ppi1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.297e-15
Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = -2
Query:  303 SIYGSKFADE-NFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGS-SSGRTNKPVVI 548
            SIYG KF DE +      G GILSMANAGP TN SQFF+  A T WLDGKH +FG+VV G+ V K +  + + SS R  +P+ I
Sbjct:   66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPIEPLKI 149          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.297e-15
Identity = 42/70 (60.00%), Postives = 48/70 (68.57%), Query Frame = -2
Query:  342 SIYGSKFADE-NFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKV 548
            SIYG KF DE     K  G GILSMAN+GP TNGSQFFV  A T WLDGKH +FG+V  GM V++ +  V
Sbjct:   67 SIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLV 136          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.919e-15
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = -2
Query:  330 SIYGSKFADE-NFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSS 548
            SIYG KF DE     K  G GILSMAN+GP TNGSQFF+  A T WLDGKH +FG+V  GM +++ +  V +++
Sbjct:   67 SIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNN 140          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 9.036e-15
Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKP---VVIXDCGQL 551
            ESIYG  F DE+F  K     +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ I      +   +KP   V I  CG+L
Sbjct:   88 ESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 9.036e-15
Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKP---VVIXDCGQL 551
            ESIYG  F DE+F  K     +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ I      +   +KP   V I  CG+L
Sbjct:   88 ESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 9.036e-15
Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = -2
Query:  285 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGSSSGRTNKP---VVIXDCGQL 551
            ESIYG  F DE+F  K     +LSMAN G  TNGSQFF+ T  T  LDG HVVFGQV+ G +VV+ I      +   +KP   V I  CG+L
Sbjct:   88 ESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIE--NQKTDAASKPFAEVRILSCGEL 177          
BLAST of DC900193 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 9.036e-15
Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = -2
Query:  282 ESIYGSKFADENFVXKXXGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIXKVGS-SSGRTNKPVVIXDCGQLS 551
            ESIYG  F DENF+ K     +LSMAN G  TNGSQFF+ T     LDG HVVFG V+ G +V++ I  + + ++ R    V + DCG L+
Sbjct:   87 ESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 177          
The following BLAST results are available for this feature:
BLAST of DC900193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
PPIL1_HUMAN4.056e-1555.41Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN4.056e-1555.41Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPIL1_ASPFU4.056e-1555.41Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_SCHPO5.297e-1553.57Peptidyl-prolyl cis-trans isomerase ppi1 OS=Schizo... [more]
PPIL1_ASPOR5.297e-1560.00Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI6.919e-1554.05Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIG_RAT9.036e-1550.00Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE9.036e-1550.00Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN9.036e-1550.00Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
NKTR_MOUSE9.036e-1547.25NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]

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Properties
Property NameValue
Genbank descriptionDC900193 VSS Citrus sinensis cDNA clone VS28229 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900193 ID=DC900193; Name=DC900193; organism=Citrus sinensis; type=EST; length=1131bp
CGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAA
GACAAGCCCTATNTTATTTAAAANGGCAGCTCATAGAAAGACATAAAAAA
CAGTTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAACAAGTAA
CATAGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACNCGGCCACA
TAATAATAGATAACATAATCACCATCACGATCGCGATCAGACGGCTCGNG
ATGATGGCGATCATTATCATGATCAAATCTAAGACAATTGACCGCAATCA
GNGATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCACTTTNTC
GATGGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAACACAACGT
GCTTCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAACTGAGAT
CCGTTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGN
GNGCTTNTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGTAGATTGATT
CGCCTCCGGTTCCGTTTCCGGCGGTGAAGTCTCCCCCCTGGCACATGCTC
GTGCCGAATTCGGCACGAGGTTTCGTACAATAAAGAGCCCTCTATTTCCA
GTTTTAAATTCCAAGTTCTAAGCTCAATCAACATGTCGGACACCTGCGGC
AACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGGGAAGCAGCTA
TGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTG
TCATGGACGTTCAGGCTGCTGAGACTGAAGGTAACTGCAAGTGCGGCCCC
ACCTGCGCTTGTGTGAACTGCACTTGTGGTAGTCACTAATAAGCAAACAC
ATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATATTGTGGGGGTT
AAGAATAATGTAAGGGTGATTAAAAAAAAAGAAAAATTCTCTACTTCGTT
TTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGCGTGTTGTGTCAC
CCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAATCATGTAATATAT
GGCCATGGCCATGACCGTGGCCTTGTGTGGT
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