CX043325

Overview
NameCX043325
Unique NameCX043325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: 6PGL_MYCLE (6-phosphogluconolactonase OS=Mycobacterium leprae GN=pgl PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.027e-26
Identity = 70/183 (38.25%), Postives = 97/183 (53.01%), Query Frame = 2
Query:  329 GWGLYRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP--KFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDL 871
            G GL R L        I+W++ H+FW DER VPKD D+ N K A    L  + I    V+ +       G   D E     L    +LA  AA G+P   FD+ L+GMGP+GHI SLFP    ++E  + V  +++SPKPPPERIT T   I  S  + ++V G  K+ AV  A+G   ++ +
Sbjct:   46 GIGLLRDLATRG--QQIDWSRVHLFWGDERYVPKDDDERNEKQARVALLDHIDIPPSQVHPMPAGDGEFG--NDLEAAA--LAYEQLLAAYAAPGYPTPNFDVHLMGMGPEGHINSLFPNTVAVRETSRMVVGVRNSPKPPPERITLTLNAIQRSREVWLMVSGTAKADAVAAAMGGAPSASI 222          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: SOL3_YEAST (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae GN=SOL3 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 2.547e-24
Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  338 LYRKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM 886
            LY  LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  +
Sbjct:   48 LYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTAL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 2.547e-24
Identity = 16/45 (35.56%), Postives = 23/45 (51.11%), Query Frame = 3
Query:  111 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL 245
            V VF     L   L ++      +  ++K  F V +SGGSLID+L
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDAL 48          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS7 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain YJM789) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.547e-24
Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  338 LYRKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM 886
            LY  LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  +
Sbjct:   48 LYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTAL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 2.547e-24
Identity = 16/45 (35.56%), Postives = 23/45 (51.11%), Query Frame = 3
Query:  111 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL 245
            V VF     L   L ++      +  ++K  F V +SGGSLID+L
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDAL 48          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS6 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.547e-24
Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  338 LYRKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM 886
            LY  LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  +
Sbjct:   48 LYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTAL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 2.547e-24
Identity = 16/45 (35.56%), Postives = 23/45 (51.11%), Query Frame = 3
Query:  111 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL 245
            V VF     L   L ++      +  ++K  F V +SGGSLID+L
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDAL 48          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: SOL3_YEAS1 (6-phosphogluconolactonase 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SOL3 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.547e-24
Identity = 67/189 (35.45%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  338 LYRKLVEPPYVDS-IEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTG-NVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPK-FDLMLLGMGPDGHIASLFPGHP---LLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQM 886
            LY  LV    + S ++W+KW +++ DER+VP    DSNY       L ++P T+  NVY ++++L    A  +           N +A       P+  DL+LLG GPDGH  SLFPG     LL E  K V +  DSPKPP +RITFT PV+  +  +  V  G+ K + +      +  +D LP  +
Sbjct:   48 LYESLVADESLSSRVQWSKWQIYFSDERIVPLTDADSNYGAFKRAVLDKLPSTSQPNVYPMDESLIGSDAESN-----------NKIAAEYERIVPQVLDLVLLGCGPDGHTCSLFPGETHRYLLNETTKRVAWCHDSPKPPSDRITFTLPVLKDAKALCFVAEGSSKQNIMHEIF--DLKNDQLPTAL 223          

HSP 2 Score: 28.8758 bits (63), Expect = 2.547e-24
Identity = 16/45 (35.56%), Postives = 23/45 (51.11%), Query Frame = 3
Query:  111 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSL 245
            V VF     L   L ++      +  ++K  F V +SGGSLID+L
Sbjct:    4 VGVFSERASLTHQLGEFIVKKQDEALQKKSDFKVSVSGGSLIDAL 48          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: 6PGL_STRCO (6-phosphogluconolactonase OS=Streptomyces coelicolor GN=pgl PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24
Identity = 64/178 (35.96%), Postives = 97/178 (54.49%), Query Frame = 2
Query:  329 GWGLYRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDA-----LSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTAL 847
            G GL   L   P  D+I+W++  ++W DER +P+   + N   A    L  VP+    V+A+  +        E AA  Y    + L  +++    AA   P FD++LLG+GPD H+ASLFP HP ++E E+ V  +  SPKPPP RI+ T P I ++  + ++  G  K++AV  AL
Sbjct:   48 GNGLLAALAGSPARDAIDWSRLDLWWGDERFLPEGDPERNVTQAQQALLDSVPLDPKRVHAMAASDGPYGSDVEAAAAAYA---QELATASVPENHAAV--PSFDVLLLGVGPDTHVASLFPEHPGVRETERTVIGVHGSPKPPPIRISLTLPAIRAAREVWLLAAGEDKANAVAMAL 220          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: 6PGL_DROME (Probable 6-phosphogluconolactonase OS=Drosophila melanogaster GN=CG17333 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23
Identity = 65/158 (41.14%), Postives = 90/158 (56.96%), Query Frame = 2
Query:  374 SIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSA-EGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPL-LKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQT 841
            +++ AKW  F+ DER V  D  DS Y      +L+Q+P    + +   D     +  A DYE  +K             +   +FDL+LLGMGPDGH  SLFP  P  L+E ++ V  I++SPKPPPERITFT P+IN +  +A VV GA K+S V++
Sbjct:   62 NLKTAKWVFFFCDERYVRLDDSDSTYGAYRAEWLTQLPCIQESQFVRADTSQPLDACAADYEAKVK-------------SQVDRFDLLLLGMGPDGHTCSLFPEQPATLQETKRLVIPIRNSPKPPPERITFTLPLINKARNVAFVVTGAAKASVVKS 206          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: 6PGL_SYNY3 (6-phosphogluconolactonase OS=Synechocystis sp. (strain PCC 6803) GN=pgl PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21
Identity = 64/158 (40.51%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  374 SIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAI-NDALSAEGAAEDYETCLKHLTKSNILAT---SAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAV 835
            ++ W K HVFW DER V  DH DSN ++A   +L QV I   N++ +   A   E  A+ YE         N LAT     A  FP FDL+LLG+G DGH ASLFP  P L   ++ +T      +P   R+TFT P+IN +  +  +V GA K  A+
Sbjct:   57 ALPWEKIHVFWGDERYVSVDHPDSNQRMARLAWLDQVDIPEANIHPMPTAAADPEQDAQTYE---------NELATFFQVEAGHFPAFDLILLGLGDDGHTASLFPHTPALTVGDRLITVGNKDGQP---RLTFTIPLINRARSVVFLVAGASKQHAL 202          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: 6PGL_ANASP (6-phosphogluconolactonase OS=Anabaena sp. (strain PCC 7120) GN=pgl PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.115e-21
Identity = 62/169 (36.69%), Postives = 85/169 (50.30%), Query Frame = 2
Query:  344 RKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAI-----NDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAV 835
            + L E      + W K HVFW DER V  DH DSN  +A   +L +V I   N++A+     N A+SA    +  +T             SA   FP  D++LLGMG D H ASLFP    L+  ++ +T       P   RITFT+P IN+++ +  VV GA K  A+
Sbjct:   47 KPLYEAIAAQKLPWDKIHVFWGDERYVSPDHPDSNELMARTAWLDRVDIPAENIHAVPTLDNNPAVSAAKYEQHLQT----------FFNSAPGEFPALDVVLLGMGDDAHTASLFPHTEALQVRDRLITVGNKDGNP---RITFTYPFINAASSVIFVVAGANKRPAL 202          

HSP 2 Score: 24.2534 bits (51), Expect = 3.115e-21
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  189 KEKGSFTVVLSGGS 230
            K++G FT+ LSGGS
Sbjct:   31 KQQGRFTIALSGGS 44          
BLAST of CX043325 vs. ExPASy Swiss-Prot
Match: SOL1_YEAST (6-phosphogluconolactonase-like protein 1 OS=Saccharomyces cerevisiae GN=SOL1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.774e-21
Identity = 62/165 (37.58%), Postives = 89/165 (53.94%), Query Frame = 2
Query:  371 DSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPIT---TGNVYAINDAL--SAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPG-HPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTAL 847
            D ++W KW +++ DER+VP    +SNY LA       +      T  +Y I+++L    +  A++YE   K L K    A   +   P FDL LLG  PDGHIASLFP     L+EN  WV  ++++P  P  RI+ T PVI  S  +  VV GA K+  ++T +
Sbjct:  113 DDVQWGKWDIYFADERLVPFSSSESNYGLAKRKIFDLIDTEKYGTPKIYHIDESLINDPQECADNYE---KILIKG--FAGRDSVKLPMFDLFLLGCAPDGHIASLFPNFQENLRENLAWVIPVENAPSGPSNRISLTIPVICHSHRVTFVVEGATKAPVIKTIM 272          
The following BLAST results are available for this feature:
BLAST of CX043325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
6PGL_MYCLE8.027e-2638.256-phosphogluconolactonase OS=Mycobacterium leprae ... [more]
SOL3_YEAST2.547e-2435.456-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS72.547e-2435.456-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS62.547e-2435.456-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
SOL3_YEAS12.547e-2435.456-phosphogluconolactonase 3 OS=Saccharomyces cerev... [more]
6PGL_STRCO7.513e-2435.966-phosphogluconolactonase OS=Streptomyces coelicol... [more]
6PGL_DROME1.281e-2341.14Probable 6-phosphogluconolactonase OS=Drosophila m... [more]
6PGL_SYNY32.672e-2140.516-phosphogluconolactonase OS=Synechocystis sp. (st... [more]
6PGL_ANASP3.115e-2136.696-phosphogluconolactonase OS=Anabaena sp. (strain ... [more]
SOL1_YEAST7.774e-2137.586-phosphogluconolactonase-like protein 1 OS=Saccha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_10D01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10D01-H2-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043325 ID=CX043325; Name=CX043325; organism=Citrus sinensis; type=EST; length=886bp
CACTCCTCCAATTTCGAAACATTTCCCTTGATCGGAACAAATCATCGGAC
TGCGTGAGAATCAAGGCATCATCATCAATGGCTGCCGAGAATAAGAACAA
GAACAAGAACGTACAAGTTTTTGACTCAGAGGAAGATCTGGCTGTGTCTT
TGGCCAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGAGAAGGGC
TCCTTCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCCTCAGGTG
GGTCCTTTAGTCTATTATTATTTTCTTTATTAATTTTCGCTTTTTTCATG
ATATTTTTTTTTCCTGTTACGGTTTTGTGGTTGGGGACTATACAGGAAAT
TAGTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGGCATGTG
TTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTA
TAAGCTTGCTTATGATGGTTTCCTTTCTCAGGTACCAATTACCACTGGCA
ATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGAT
TACGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGCTACATC
TGCTGCTACTGGTTTTCCAAAGTTTGATCTCATGCTTCTGGGTATGGGTC
CAGATGGACATATAGCTTCTCTGTTTCCAGGGCATCCTCTTCTCAAGGAG
AATGAGAAATGGGTTACTTTCATTAAAGACTCGCCAAAGCCACCTCCAGA
GAGAATCACTTTCACCTTCCCTGTAATCAACTCATCTGCATATATTGCAA
TGGTGGTGTGTGGTGCTGGAAAATCAAGTGCAGTTCAAACTGCATTGGGT
AATAATCAAAACTCTGATTTGCTGCCAGTTCAAATG
back to top