CX043311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCSB_DICDI (Hydroxymethylglutaryl-CoA synthase B OS=Dictyostelium discoideum GN=hgsB PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.122e-42 Identity = 98/264 (37.12%), Postives = 159/264 (60.23%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKL-EGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEATKEKLGPFSTLS-GDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSN-----------ILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRY---GAKDFVTSKDSSLLAPGTYYLTEVD 746 FYKP+L+SEYP VDGKLS CYL ALD CY K+E + + +FS+ + DY FHSPYN+LVQKS+ARL++NDF++N ++ + L PF LS G +SY + L++++ +L+ + KV PSTL+ K+ GN Y + N ++L+ K+V++FSYGSGL A++FS +++ ++ + +N I + N+ +L +R + PE F ++ + E + GA+ + + D ++ GT+YL ++D Sbjct: 194 FYKPDLSSEYPYVDGKLSIECYLRALDKCYLEYKKKFESINDDNKFSMDSFDYVCFHSPYNRLVQKSYARLIYNDFLQNPNN---PKYQDLLPFKDLSTGKDSYINSKLDQITLKLSLDDFKTKVNPSTLLSKECGNSYCGSVYSGILSLLSNV-NDLNNKKVLVFSYGSGLAASLFSFRINNNKNRNNNNNNNNCFFKTTNDIGKISNIKERLSNRVKVSPEEFTRILDIREKSHQMVGARTPIDTLD--YISAGTFYLEKID 451
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS2_BOVIN (Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Bos taurus GN=HMGCS2 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 5.182e-41 Identity = 97/259 (37.45%), Postives = 141/259 (54.44%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ------FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSN--ILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSM 752 FYKP++ SEYP+VDGKLS CYL ALD CY K EK + KQ F+L + Y +FH+P+ KLVQKS ARL+FNDF+ + + L F L +++Y ++D++K + + +++ K + S + GNMYT + H+ +L G R+ FSYGSGL A+ FS ++S+ P S + S ++ +L SR PE F E+M E Y +F D + L PGT+YL VD + Sbjct: 241 FYKPDVTSEYPLVDGKLSIQCYLRALDKCYAFYRQKIEK-QWKQAGIDRPFTLDDVQYMIFHTPFCKLVQKSLARLMFNDFLLASGDTQTGIYKGLEAFRGLKLEDTYTNKDVDKAFLKASLNMFNKKTKNSLYLSTYNGNMYTSSLYGCLASLLAHHSAQDLAGSRIGAFSYGSGLAASFFSFRVSQDASPGSPLEKLVSSTSDLQKRLASRKRVSPEEFTEIMNQREQYYHKMNFSPPGDKNSLFPGTWYLERVDEL 498
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS1_MOUSE (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Mus musculus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.155e-40 Identity = 100/257 (38.91%), Postives = 148/257 (57.59%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEGKQ--FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVD 746 FYKP++ SEYPVVDGKLS CYL ALD CY K + ++++K EGK F+L++ + +FHSPY KLVQKS AR+ NDF+ + + + L F + +++Y RD+EK + + L++ K + S L+ Q GNMYT + +L GKRV +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD Sbjct: 204 FYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDFTLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRVGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYLVRVD 459
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS1_RAT (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Rattus norvegicus GN=Hmgcs1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.969e-40 Identity = 99/257 (38.52%), Postives = 148/257 (57.59%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEGKQ--FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVD 746 FYKP++ SEYPVVDGKLS CYL ALD CY K + ++++K EGK F+L++ + +FHSPY KLVQKS AR+ NDF+ + + + L F + +++Y RD+EK + + L++ K + S L+ Q GNMYT + +L GKR+ +FSYGSGL AT++SLK+++ P S + + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD Sbjct: 204 FYKPDMLSEYPVVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGKDKDFTLNDFGFMIFHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYLVRVD 459
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS1_CRIGR (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Cricetulus griseus GN=HMGCS1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.274e-39 Identity = 96/257 (37.35%), Postives = 145/257 (56.42%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCY----KCLCSKYEKLEGKQ--FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXI-HNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSN--ILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVD 746 FYKP++ SEYP+VDGKLS CYL ALD CY K + ++++K EG F+L++ + + HSPY KLVQKS AR+ NDF+ + + + L F + +++Y RD+EK + + L++ K + S L+ Q GNMYT + +L GKR+ +FSYGSGL AT++SLK+++ P S + S+ ++ +L SR P+ F E MKL E + +++ L GT+YL VD Sbjct: 204 FYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYRKKIRAQWQK-EGNDNDFTLNDFGFMISHSPYCKLVQKSLARMFLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFNQKTKASLLVSNQNGNMYTSSVYGSLASVLAQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKVTASLCDLKSRLDSRTCVAPDVFAENMKLREDTHHLANYIPQCSIDSLFEGTWYLVRVD 459
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS1_CHICK (Hydroxymethylglutaryl-CoA synthase, cytoplasmic OS=Gallus gallus GN=HMGCS1 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.476e-37 Identity = 96/258 (37.21%), Postives = 145/258 (56.20%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYE---KLEG--KQFSLSNADYFVFHSPYNKLVQKSFARLLFNDFM--RNASSVDEATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSE-LDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNIL--SVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVD 746 FYKP++ SEYPVVDGKLS CYL ALD CY +K + EG + F+L++ + +FHSPY KLVQKS ARLL NDF+ +NA + + L F + +++Y RD+EK + + L++ K + S L+ Q GNMYT + E L G+R+ FSYGSG AT++S+++++ P S + + S+ ++ +L SR P+ F E MK+ + + +++ L GT+YL VD Sbjct: 204 FYKPDMVSEYPVVDGKLSIQCYLSALDRCYSVYRNKIHAQWQKEGTDRGFTLNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNAETAN-GVFSGLEAFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASLLAQYSPEHLAGQRISEFSYGSGFAATLYSIRVTQDATPGSALDKITASLSDLKARLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVEDLFEGTWYLVRVD 460
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS_YEAST (Hydroxymethylglutaryl-CoA synthase OS=Saccharomyces cerevisiae GN=ERG13 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.136e-34 Identity = 93/257 (36.19%), Postives = 128/257 (49.81%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSK------YEKLEGKQF--SLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVDEATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHS-ELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVD 746 FYKP+ SEYP VDG S TCY+ ALD YK K G L DY VFH P KLV KS+ RLL+NDF N E E +T DES +++EK +AKP + +V S ++P GNMYT ++ S +L GKRV LFSYGSGL A+++S K+ + +I+ +++ KL R P+++ ++L E+ + K+F L G YYLT +D Sbjct: 233 FYKPDFTSEYPYVDGHFSLTCYVKALDQVYKSYSKKAISKGLVSDPAGSDALNVLKYFDYNVFHVPTCKLVTKSYGRLLYNDFRANPQLFPEVDAE----LATRDYDESLTDKNIEKTFVNVAKPFHKERVAQSLIVPTNTGNMYTASVYAAFASLLNYVGSDDLQGKRVGLFSYGSGLAASLYSCKIVG-----DVQHIIKELDITNKLAKRITETPKDYEAAIELRENAHLKKNFKPQGSIEHLQSGVYYLTNID 480
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS_SCHPO (Hydroxymethylglutaryl-CoA synthase OS=Schizosaccharomyces pombe GN=hcs1 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.511e-32 Identity = 92/254 (36.22%), Postives = 122/254 (48.03%), Query Frame = 3 Query: 3 FYKPNLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQ--FSLSNADYFVFHSPYNKLVQKSFARLLFNDFMRNASSVD-EATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHN-KHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNILSVMNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSM 752 FYKP+L SEYP VDG S CY+ ALD Y + GK L DY +FH+P K VQK++ARLL+ D S+ + E +E L STL +S + LEK + K ++ +V PS P GNMYT + EL GKRV +SYGSGL A+ FS + +S I N+ L +RH P + E ++L + K+F L GTYYLT +D M Sbjct: 193 FYKPDLTSEYPYVDGHFSLECYVKALDGAYANYNVRDVAKNGKSQGLGLDRFDYCIFHAPTCKQVQKAYARLLYTDSAAEPSNPELEGVRELL---STLDAKKSLTDKALEKGLMAITKERFNKRVSPSVYAPTNCGNMYTASIFSCLTALLSRVPADELKGKRVGAYSYGSGLAASFFSFVVKG-----DVSEIAKKTNLVNDLDNRHCLTPTQYEEAIELRHQAHLKKNFTPKGSIERLRSGTYYLTGIDDM 438
BLAST of CX043311 vs. ExPASy Swiss-Prot
Match: HMCS_CAEEL (Hydroxymethylglutaryl-CoA synthase OS=Caenorhabditis elegans GN=F25B4.6 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.119e-18 Identity = 71/254 (27.95%), Postives = 117/254 (46.06%), Query Frame = 3 Query: 3 FYKP--NLASEYPVVDGKLSQTCYLMALDTCYKCLCSKYEKLEGKQFSLSNADYFVFHSPYNKLVQKSFARLLFNDF-MRNASSVDEATKEKLGPFSTLSGDESYQSRDLEKVSQQLAKPLYDAKVQPSTLIPKQVGNMYTXXXXXXXXXXIHNKHSELDGKRVVLFSYGSGLTATMFSLKLSEGRHPFSLSNILSV-MNVAGKLKSRHEFPPENFVEVMKLMEHRYGAKDFVTSKDSSLLAPGTYYLTEVDSM 752 F+KP + SEYPVVDG LS + YL A+ Y SK + L++ D HSP+ K+VQK A + + D +R+ KL DE+ ++ + + +L+ ++ K P + +++GNMYT + K ++ F+YGSGL + +F ++ R +L I V + +L R +F PE F E ++ E +K+ S + L P TY+L +D + Sbjct: 200 FFKPITPIPSEYPVVDGSLSLSSYLEAVRMTYTYFISKVNRHTTGIDGLNSFDGVFLHSPFTKMVQKGLAVMNYTDSQLRHKQLNGNGVDHKL--------DENDRAGLAKMI--ELSAQVWKEKTDPYLVFNRRIGNMYTPSLFAQLLAYLAADDCVTGEKSILFFAYGSGLASAIFPGRV---RQTSNLDKIRQVAIRAIKRLDDRIQFTPEEFTETLQKREVFLRSKEIPKSPSETSLFPNTYFLDNMDKL 440 The following BLAST results are available for this feature:
BLAST of CX043311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043311 ID=CX043311; Name=CX043311; organism=Citrus sinensis; type=EST; length=753bpback to top |