CX043307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD22_ARATH (LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.043e-21 Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 232 SGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEVVHLRVR 579 S CAACK RR+CA DC+ APYFP D ++F N HK+FG SN+ K+++ L ++ A+ +++++++AR DPV GC G I LQ QI+ + +L + ++ R R Sbjct: 27 SSNNNSTNQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDR 142
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD27_ARATH (LOB domain-containing protein 27 OS=Arabidopsis thaliana GN=LBD27 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20 Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 241 KQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEV 561 K G CAACK RRRCA DC APYFPA++P+ F NVH++FG ++ K+L++L Q+ +A+ S+++++ R R PV+GC+G LQ I + +L +++ Sbjct: 30 KGGTSGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKSIIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQL 136
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD7_ARATH (LOB domain-containing protein 7 OS=Arabidopsis thaliana GN=LBD7 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.916e-20 Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 247 GAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEV 561 G+ + CAACK R++C ++C+ A YFP D KF N HK+FG SN+ KML+ + QR A+ +++Y ANAR DPV G I L+ +I+ +QT+L L + ++ Sbjct: 9 GSTTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAMENLIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQI 113
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD35_ARATH (LOB domain-containing protein 35 OS=Arabidopsis thaliana GN=LBD35 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.767e-19 Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 262 CAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQLALAQAEV 561 C+ACK+++ CA +C+FAP+FP + F +H++FGA NV K+L L QR AV+++ YEA A RDP++GCVG + +NQ+ L Q+ A+ E+ Sbjct: 6 CSACKVMKCDCAPNCIFAPHFPLTNLETFERLHRIFGAGNVFKILANLDPIQRETAVNALCYEAEALERDPIFGCVGIFNHYKNQLQNLDEQINSAKNEL 105
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD2_ARATH (LOB domain-containing protein 2 OS=Arabidopsis thaliana GN=LBD2 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.870e-13 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 262 CAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVG 492 CA+CK R++C +C+ +PYFPA + ++F VHKVFG SNV KM++ + R S+ +EA R +DPV G G Sbjct: 25 CASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFGVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYG 101
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD9_ARATH (LOB domain-containing protein 9 OS=Arabidopsis thaliana GN=LBD9 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.601e-13 Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 256 SPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAV-SSMVYEANARVRDPVYGCVGAISSLQNQIDVLQTQL 540 +PCA C +RC + C FAPYFPA+ ++ N HK+FG SN+ KM++ ++ D + SS++ E +A +DP G G I L+ QI++ + L Sbjct: 11 APCALCTTKNKRCPKKCDFAPYFPAERKGEYENAHKLFGTSNIIKMMRFASKDKQRDMLASSILMEGDAWKKDPARGGFGMIQKLKWQIELRKIYL 106
BLAST of CX043307 vs. ExPASy Swiss-Prot
Match: LBD34_ARATH (LOB domain-containing protein 34 OS=Arabidopsis thaliana GN=LBD34 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.276e-12 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 247 GAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQEL---PVHQRGDAVSSMVYEANARVRDP 474 G + CAAC+ RRRC DC F PYFPA+ Q+F N H++ + + K L+EL P QR +A+SS++YE+N R + P Sbjct: 13 GYVNQCAACRHQRRRCTPDCFFRPYFPAERHQEFQNFHRLHSNTRLQKKLKELGLSPEEQR-EAMSSIIYESNIRSQFP 90 The following BLAST results are available for this feature:
BLAST of CX043307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043307 ID=CX043307; Name=CX043307; organism=Citrus sinensis; type=EST; length=798bpback to top |