CX043294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 1.506e-66 Identity = 124/241 (51.45%), Postives = 156/241 (64.73%), Query Frame = 1 Query: 28 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDP--QWCL-RGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYT 717 ++LC L+ ++ WI A ATFY YGNLY QGYG AALSTALFN+G +CG C+ I+C D +WC RG++ VTATN CPP GGWC+PP HFD+SQP ++ I YRAGIVPV+YRRVRC R GG+RFT+ G +F LVL+ NV G+G V AVS++G+ T W MSRNWG NWQS + L GQ LSF VTT+ G ++ +VAP W FGQT++ Sbjct: 9 LVLCT-ILAARMALAAADDWIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 248.825 bits (634), Expect = 2.174e-65 Identity = 124/248 (50.00%), Postives = 158/248 (63.71%), Query Frame = 1 Query: 16 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726 M+ + LC+ ++ ++ W A ATFY YGNLY QGYG + AALS ALFN+G SCG C+ I+C + PQWC G+ + VTATN CPP GGWC+PP HFD+SQP ++ I Y+AGIVPV+Y+RVRC R GG+RFT+ G +YF LVLITNV G+G V + IKG+ T W MSRNWG NWQS + L GQ+LSF VTT+ G + +VAP W FGQT++ Q Sbjct: 5 MSSRLALCLAVVAACAAGGAVADWSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALSFAVTTTGGQYLQFQDVAPAWWQFGQTFSTYQ 252
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 245.743 bits (626), Expect = 1.841e-64 Identity = 117/223 (52.47%), Postives = 149/223 (66.82%), Query Frame = 1 Query: 76 YGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPG------GWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSF-GQTYTGR 723 + GW + ATFY YG+L+ QGYG TAALSTALFNNG CGAC++IMC + PQWCL GSI +TATNFCPP WC+PP HFDLSQP+F IA+Y+AG+VPV +RRV C + GG++F I G+ +F ++L NVGGAG VRA+ IKG+RT+W M +NWGQ W + L GQ LSF +TTS+G +V PP W GQ++ G+ Sbjct: 87 HSGWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDNWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDWKCNGQSFDGK 309
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 243.432 bits (620), Expect = 9.135e-64 Identity = 115/249 (46.18%), Postives = 164/249 (65.86%), Query Frame = 1 Query: 4 KEKKMALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAN--DPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYT 717 K+ L +++ + SL++ GW + ATFY YGNLY GYGTNTAALS+ALFN+G SCG C+QI C + +P+WCL+G ++ +T TN CPP GGWC+PP HFD+++P + I Y+AGIVPV+Y+RV C + GG+RFT+ G +YF LVLI+NV G+G +++V +KG T P+SRNWG NWQS++ L GQ+L+F VT++ G ++V N+ P W FGQ+++ Sbjct: 7 KKTPSILPLVVVIAAASLIAPTTA--GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWWKFGQSFS 253
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 2.035e-63 Identity = 116/228 (50.88%), Postives = 152/228 (66.67%), Query Frame = 1 Query: 67 VQGY---GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYNVAPPKWSFGQTY 714 V GY G W AHATFY YGNL++ GYG +TAALST LFN+G CG CFQI C+ P S +VTATN CPP GGWC+PP HFD+++P F +A +RAGI+PV YRRV C+R+GG+RF G+SY+ L+ + NVGGAGD++++++KGSRT W MS NWG ++Q+ S L GQSLSF VT+ + G ++ ++NVAP WS G+TY Sbjct: 28 VAGYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLSFRVTSYTTGETIYAWNVAPANWSGGKTY 255
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.658e-63 Identity = 116/224 (51.79%), Postives = 149/224 (66.52%), Query Frame = 1 Query: 82 GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCAND--PQWCLRGSII-VTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726 GW+ ATFY YGNLY QGYG N AALST LFNNG SCG C+ I+C D P C G+ I VT TNFCPP GGWC+ HFD+SQP +++I Y AGIVP++Y++V+C R+GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W MSRNWG NWQ + L GQ+LSF VT++ G ++V +V P WSFGQT++ Q Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPYGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.117e-61 Identity = 110/223 (49.33%), Postives = 141/223 (63.23%), Query Frame = 1 Query: 79 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGS-RTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTY 714 G W AHATFY Y + +GYG T A+ST LF G CGAC+++ C + P C G+ ++VTATN CPP GGWC+PP HFDLS P F IAQ +AGIVP+ YRRV C + GGIR+TI G+ YFNLV+++NVGGAGDV +S+KG+ R +W P+ RNWGQ WQ++ L G+SL+F V T + S++V PP W FG TY Sbjct: 40 GPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFRVMTGDHRKATSWHVLPPDWQFGVTY 262
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.458e-61 Identity = 110/220 (50.00%), Postives = 147/220 (66.82%), Query Frame = 1 Query: 85 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPP------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYT 717 W+ ATFY YGNLY QGYG N AALST LFN+G SCG C+ I+C + P WC G +I VT TN+CPP GGWC+ HFD+SQP +++I Y AGI+P++Y++V+C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G ++V + P WSFGQT++ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 242
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.542e-61 Identity = 116/241 (48.13%), Postives = 152/241 (63.07%), Query Frame = 1 Query: 25 WVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRGSII-VTATNFCPPG---GWCDPPNHHFDLSQPVFQHIAQY-RAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGR 723 +++ + +S +S GWI AHAT+Y Y N Y G+G +TAALS LF +G SCG C+Q+ C DP+WCLRG+ + VTATNFCP GWC+ P HHFD+S P F IA+ GIVPV YRRV CKR GG+RFT+ G FN+V+I+NVGG G VR+V+++GS+ + W M+RNWG NWQS+ L GQ LSF VT ++ + NV P W FGQT++ R Sbjct: 7 YLVTVILLVSTLSVGMCSNGWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSR 247
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 8.003e-60 Identity = 111/223 (49.78%), Postives = 142/223 (63.68%), Query Frame = 1 Query: 85 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGRQ 726 W A AT+Y YG+L GYG T LS LF G CGACF++ C +D +WC+ G SII+TATNFC P GG C+PPN HF L F+ IA ++AG +PV YRR+ C++ G +RFT++G F VLITNV G+GD+ AV IKGSRT W PM RNWGQNW N+ L Q+LSF VT+S+ +V SYNV+P W++GQT+ G+Q Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQ 262 The following BLAST results are available for this feature:
BLAST of CX043294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043294 ID=CX043294; Name=CX043294; organism=Citrus sinensis; type=EST; length=728bpback to top |