CX043294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPB4_ARATH (Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 61/204 (29.90%), Postives = 89/204 (43.63%), Query Frame = 1 Query: 175 GYGTNTA---------ALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGG---IRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSL--SFVVTTSNGHS---VVSYNVAPPKWSFGQTY 714 GYG+ A A +LFNNG CG C+Q++C P C I VT T+ C PGG C H DLS +A+ AG++ V Y+R C G R + Y+ ++ G GD+ V I+ + + M W+ NS G +L F + ++G S +V+YNV P W ++Y Sbjct: 55 GYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPA-CSGSPITVTITDEC-PGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEIQPAGGSFISMQEMRSAVWKVNS---GSALRGPFNIRLTSGESHKVIVAYNVIPANWKPDESY 253
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13 Identity = 64/223 (28.70%), Postives = 98/223 (43.95%), Query Frame = 1 Query: 85 WINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG-GIRFTINGHS---YFNLVLITNVGGAGDVRAVSIKGSRTR-WQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWS 699 W A AT+Y G N + + T+ + +F +G CG+C+QI C N P C ++I+T N+ P +HFDLS F +A+ AGI+ + ++RV C G + F + S YF VL+ G GDV V + + ++ W PM +WG W+ SN L S +T +G +V+ V P W+ Sbjct: 42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPA-CSGNPETVIITDMNYYPVS------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGSNPVYF-AVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIWRLDSNHRLTA-PFSLRITNESGKQLVASQVIPANWA 255
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.252e-12 Identity = 60/230 (26.09%), Postives = 97/230 (42.17%), Query Frame = 1 Query: 64 SVQGYGGWINAHATFYXXXXXXXXXXXXXXYG--NLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG---GIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT---RWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWS 699 ++ G W NA AT+Y G + + T+ + L+ G CG+C+++ C +P ++ +T N+ P +HFDLS F +A+ RAGI+ V + RV C+ G G + VL+ G GDV V +K + RW PM +WG W+ SN L S + + +G ++V+ +V P W+ Sbjct: 41 AIGGAAAWGNAKATWYGQPNGAGAADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPACSGNAQTVAITDMNYFPLS------QYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGSSPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVWRLDSNHRLRA-PFSIRIRSDSGKTLVAPDVIPLNWT 263
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.135e-12 Identity = 62/234 (26.50%), Postives = 101/234 (43.16%), Query Frame = 1 Query: 76 YGG-WINAHATFYXXXXXXXXXXXXXX---YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNVGGAGDVRAVSIK-GSRTRWQPMSRNWGQNWQ--SNSYLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGR 723 YG W+ A ATFY Y ++ + TA + +F +GL C AC++I C +P C ++V T+ + +HFDLS F +A+ +AG + + +RRV+CK G + T + + ++ +L+ G G++ AV IK + PM +WG W+ L G S +T+ G +V +V P W YT + Sbjct: 14 YGSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKC-KEPVECSGEPVLVKITD----KNYEHIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKG-PFSIRLTSEGGAHLVQDDVIPANWKPDTVYTSK 241
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.789e-12 Identity = 60/219 (27.40%), Postives = 99/219 (45.21%), Query Frame = 1 Query: 85 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG--WCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNG-GIRFTINGHSY---FNLVLITNVGGAGDVRAVSI-KGSRTRWQPMSRNWGQNWQSNSYLNGQ-SLSFVVTTSNG-HSVVSYNVAPPKWSFGQTY 714 ++N+ AT+Y YG + +S L+NNG CGAC+Q+ C P C + V AT+ G + P + +++P ++ Y G+V V Y+R+ C+ G + + I+ SY + +L+ VGG D+ AV + + W+ M R +G + G +L F+V S G + + S N P W+ G TY Sbjct: 27 FVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPH-CSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTEN-QLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATY 243
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12 Identity = 54/185 (29.19%), Postives = 86/185 (46.49%), Query Frame = 1 Query: 211 LFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPP--NHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNVGGAGDVRAVSI--KGSRTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTY 714 +F +G CG+CF+I C+ P+ C ++ T+ D P +HFDLS F +A+ +AGI+ +RRV+CK + T + + + +L+ V G GDV V I KGS W+ + +WG W+ ++ L G S VTT G +++ + P W Y Sbjct: 85 IFKDGKGCGSCFEIKCSK-PEACSDKPALIHVTDM------NDEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSE-EWKALKESWGAIWRIDTPKPLKG-PFSVRVTTEGGEKIIAEDAIPDGWKADSVY 260
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 61/230 (26.52%), Postives = 100/230 (43.48%), Query Frame = 1 Query: 85 WINAHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDP-PNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTINGHSYFN----LVLITNVGGAGDVRAVSIK-GSRTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGR 723 W++A +T+Y Y N+ + T +T +F +G CG+CF+I C P+ C ++ VT T+ +P +HFDLS F +A+ AG + + +RRV+CK + T + N +L+ V G GDV AV IK + +W + +WG W+ ++ L G + TT G +V P W +Y+ + Sbjct: 41 WLDAKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKCTK-PESCSGEAVTVTITDDNE-----EPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAVWRIDTPDKLTG-PFTVRYTTEGGTKSEFEDVIPEGWKADTSYSAK 263
BLAST of CX043294 vs. ExPASy Swiss-Prot
Match: MPAP1_PHLPR (Pollen allergen Phl p 1 OS=Phleum pratense GN=PHLPI PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11 Identity = 59/230 (25.65%), Postives = 101/230 (43.91%), Query Frame = 1 Query: 85 WINAHATFYXXXXXXXXXXXXXX--YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDP-PNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNGGIRFTIN----GHSYFNLVLITNVGGAGDVRAVSIK-GSRTRWQPMSRNWGQNWQSNS--YLNGQSLSFVVTTSNGHSVVSYNVAPPKWSFGQTYTGR 723 W++A +T+Y Y ++ + T +T +F +G CG+CF+I C P+ C ++V T+ +P +HFDLS F +A+ AG + + +RRV+CK G + T + + + +L+ V G GDV AV IK + +W + +WG W+ ++ L G + TT G + +V P W +Y + Sbjct: 41 WLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-PEACSGEPVVVHITDDNE-----EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNGDGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTG-PFTVRYTTEGGTKTEAEDVIPEGWKADTSYESK 263 The following BLAST results are available for this feature:
BLAST of CX043294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043294 ID=CX043294; Name=CX043294; organism=Citrus sinensis; type=EST; length=728bpback to top |