CN186140

Overview
NameCN186140
Unique NameCN186140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12025 contig Csv1_Contig12025:974..1746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: OAT_STACT (Ornithine aminotransferase OS=Staphylococcus carnosus (strain TM300) GN=rocD PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 61/195 (31.28%), Postives = 100/195 (51.28%), Query Frame = -2
Query:  185 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPPIGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPAEVDELISKYGK 766
            +ILFIADE+    GR G  F  D   +K D+    KAL    +PI A+    EV +V      T G  SHG T+ G+P++ AV+I AL + ++  + E+  ++   FQD +K   D+P I E+RG GL  G E  ++  P             +    ++ G+L + + D ++  +PP I++  E+D+ + +  K
Sbjct:  220 NILFIADEIQSGLGRSGKTFATDWDGVKLDVYILGKALGGGVLPISAVAADSEVLDVF-----TPG--SHGSTFGGNPLAAAVSIAALDVLEDEKLAERSRELGEYFQDELKKI-DNPVIKEVRGRGLFIGVELNEDARP-------------YAEALKEEGLLCKETHDTVIRFAPPLIITKEEIDDALERIKK 393          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: BIOB_BACTN (Biotin synthase OS=Bacteroides thetaiotaomicron GN=bioB PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.848e-20
Identity = 54/192 (28.12%), Postives = 101/192 (52.60%), Query Frame = -2
Query:  197 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPPIGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPAEVDELIS 772
            ++DIL I DE+   FGR G +F  +   ++PD++   KAL+  YM + A+L S ++++ I + +    +F HG T+ G+P++CAVA  ++++  +    E V +I  + ++ +      P + ++R  G I   +   + S            AY   +  + G+ VR  G  + + PPFI+SP ++ +L S
Sbjct:  554 EHDILLIFDEIATGFGRTGKLFAWEHAGVEPDIMCIGKALTGGYMTLSAVLASNQIADTISNHAPK--AFMHGPTFMGNPLACAVACASVRLLLDSGWAENVKRIEAQLKEELAPARKFPQVADVRILGAIGVIQTERSVSM-----------AYMQRRFVEEGIWVRPFGKLVYLMPPFIISPEQLSKLTS 732          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: PAT_ENT38 (Putrescine aminotransferase OS=Enterobacter sp. (strain 638) GN=patA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20
Identity = 62/212 (29.25%), Postives = 102/212 (48.11%), Query Frame = -2
Query:  152 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPP--IGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPAEVDELISKYGKALKATEERVKE 772
            ++D L I DEV    GR G MF C+  +++PD++  AKAL    MPIGA + + EV  V+         F H  T+ G+P+SCA A+  + +  E+N+  Q  +      DG        P  + + RG G++   EF DN+           IG  F ++  +  +LV  + +N   I + PP  ++  + ++++     AL A    V+E
Sbjct:  263 EFDALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFD-----NPFLHTTTFGGNPLSCAAALATINVLLEQNLPAQAEQKGDMLLDGFLQLGREYPDLVQDARGKGMLIAIEFVDNE-----------IGYSFASEMFRQRILVAGTLNNSKTIRIEPPLTLTIEQCEQVLKATRTALAALRVSVEE 458          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: OAT_PLACH (Ornithine aminotransferase OS=Plasmodium chabaudi GN=OAT PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.944e-20
Identity = 63/206 (30.58%), Postives = 104/206 (50.49%), Query Frame = -2
Query:  161 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPPIGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPAEVDELISKYGKALKATEER 772
            KY++LF+ADEV    GR G +     Y++KPD+V   KALS  + PI A+L +  V  VI           HG TY G+P++ ++ +E+L +     + E  +K+   F +G+ K   DS  I +IRG GL+   EF  N+  N               + +++G++ R V    I ++PP  ++  ++DE      K +K  +E+
Sbjct:  225 KYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVVLLGKALSGGHYPISAVLANDSVMLVIKPG-------EHGSTYGGNPLAASICVESLNVLINEKLCENADKLGGPFLEGLKKELKDSKIIRDIRGKGLLCAIEF-KNELVNV---------LDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVKFFDEK 413          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: OAT_MACCJ (Ornithine aminotransferase OS=Macrococcus caseolyticus (strain JCSC5402) GN=rocD PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.168e-19
Identity = 60/192 (31.25%), Postives = 97/192 (50.52%), Query Frame = -2
Query:  194 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPPIGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPAEVDELISK 766
            ++LFIADE+    GR G MF  D  ++ PD+    KAL     PI  +L   E+ EV ++        SHG T+ G+P++CAV+  AL +  +  + E+  ++   FQ  +K   D+P I E+RG GL  G E  +   P             +  Q ++ G+L + + D ++  +PP I+S  ++D  I K
Sbjct:  220 NVLFIADEIQAGLGRSGKMFATDWDNVVPDMYILGKALGGGVFPISCVLADKEILEVFNAG-------SHGSTFGGNPLACAVSNAALDVLVDEKLAERSLELGEYFQSKLKEI-DNPVIKEVRGKGLFIGVELNEAARP-------------YCEQLKELGLLCKETHDTVIRFAPPLIISQEDLDWAIDK 390          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: PAT_CITK8 (Putrescine aminotransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=patA PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.526e-19
Identity = 60/212 (28.30%), Postives = 103/212 (48.58%), Query Frame = -2
Query:  152 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPP--IGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPAEVDELISKYGKALKATEERVKE 772
            ++  L I DEV    GR G MF C+  +++PD++  AKAL    MP+GA + + EV  V+         F H  T+ G+P++CA A+  + +  E+N+  Q  +      DG    +   P  + + RG G++   EF DN+           IG  F ++  +  +LV  + +N   I + PP  ++  + ++++    KAL A    V+E
Sbjct:  263 EFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPVGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFLQLAREYPDLVQDARGKGMLMAIEFVDNE-----------IGYNFASEMFRQRVLVAGTLNNSKTIRIEPPLTLTIEQCEQVLKATRKALAALRVSVEE 458          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: PAT_SALTI (Putrescine aminotransferase OS=Salmonella typhi GN=patA PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19
Identity = 60/213 (28.17%), Postives = 104/213 (48.83%), Query Frame = -2
Query:  149 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPP--IGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPAEVDELISKYGKALKATEERVKEL 772
            ++  L I DEV    GR G MF C+  +++PD++  AKAL    MPIGA + + EV  V+         F H  T+ G+P++CA A+  + +  E+N+  Q  +      DG +  +   P  + E RG G++   EF DN++           G  F ++  +  +LV  + +N   I + PP  ++    ++++     AL A +  V+E+
Sbjct:  263 EFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHEARGKGMLMAIEFVDNET-----------GYRFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIELCEQVLKSARNALAAMQVSVEEV 459          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: PAT_SALHS (Putrescine aminotransferase OS=Salmonella heidelberg (strain SL476) GN=patA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19
Identity = 60/213 (28.17%), Postives = 104/213 (48.83%), Query Frame = -2
Query:  149 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPP--IGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPAEVDELISKYGKALKATEERVKEL 772
            ++  L I DEV    GR G MF C+  +++PD++  AKAL    MPIGA + + EV  V+         F H  T+ G+P++CA A+  + +  E+N+  Q  +      DG +  +   P  + E RG G++   EF DN++           G  F ++  +  +LV  + +N   I + PP  ++    ++++     AL A +  V+E+
Sbjct:  263 EFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHEARGKGMLMAIEFVDNET-----------GYRFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIELCEQVLKSARNALAAMQVSVEEV 459          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: OAT_PLAYO (Ornithine aminotransferase OS=Plasmodium yoelii yoelii GN=OAT PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19
Identity = 60/206 (29.13%), Postives = 103/206 (50.00%), Query Frame = -2
Query:  161 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPPIGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPAEVDELISKYGKALKATEER 772
            KY++LF+ADEV    GR G +     Y++KPD++   KALS  + PI A+L + ++  VI           HG TY G+P++ ++ +EAL +     + E   K+   F + +K    DS  + ++RG GL+   EF  N+  N               + +++G++ R V    I ++PP  ++  ++DE      K +K  +ER
Sbjct:  225 KYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPG-------EHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEF-KNELVNV---------LDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVKFFDER 413          
BLAST of CN186140 vs. ExPASy Swiss-Prot
Match: OAT_BACC3 (Ornithine aminotransferase OS=Bacillus cereus (strain 03BB102) GN=rocD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.992e-19
Identity = 58/194 (29.90%), Postives = 100/194 (51.55%), Query Frame = -2
Query:  194 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPPIGEIRGTGLINGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPAEVDELISK 772
            K ++LF+ADE+    GR G +F CD  ++ PD+    KAL     PI  +  + ++  V           SHG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P I E+RG GL  G E       NEP  P       +  Q +  G+L + + +N++ ++PP ++S  +++    K
Sbjct:  218 KENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFEPG-------SHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIEL------NEPARP-------YCEQLKAAGLLCKETHENVIRIAPPLVISEEDLEWAFQK 390          
The following BLAST results are available for this feature:
BLAST of CN186140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
OAT_STACT6.848e-2031.28Ornithine aminotransferase OS=Staphylococcus carno... [more]
BIOB_BACTN6.848e-2028.13Biotin synthase OS=Bacteroides thetaiotaomicron GN... [more]
PAT_ENT388.944e-2029.25Putrescine aminotransferase OS=Enterobacter sp. (s... [more]
OAT_PLACH8.944e-2030.58Ornithine aminotransferase OS=Plasmodium chabaudi ... [more]
OAT_MACCJ1.168e-1931.25Ornithine aminotransferase OS=Macrococcus caseolyt... [more]
PAT_CITK81.526e-1928.30Putrescine aminotransferase OS=Citrobacter koseri ... [more]
PAT_SALTI1.992e-1928.17Putrescine aminotransferase OS=Salmonella typhi GN... [more]
PAT_SALHS1.992e-1928.17Putrescine aminotransferase OS=Salmonella heidelbe... [more]
OAT_PLAYO1.992e-1929.13Ornithine aminotransferase OS=Plasmodium yoelii yo... [more]
OAT_BACC31.992e-1929.90Ornithine aminotransferase OS=Bacillus cereus (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186140 ID=CN186140; Name=CN186140; organism=Citrus sinensis; type=EST; length=773bp
TTTTTTTTTTTTTTTTTGATGGCAAATGCTTTATTGAAGCACCCATTTAA
GGGCACGTCACAGAAGAGGAAAAAAAATATTTGCCCTTATAGAAGTCTTA
CAGTTTTTTTTCATCAATATCAGCCATTACAATTTACTGCTGGGACTTGA
GTTCCTTCACCCTCTCCTCGGTCGCCTTCAGTGCCTTCCCATATTTGCTT
ATTAACTCATCAACCTCTGCAGGGGACATTATAAATGGAGGAGACATCAT
AATGTTGTCACCTGAAACACGTACTAACATTCCGTGCTTTTCGCACTGTG
CTCCAAAATATGCACCTATCCCCCATTCAGGAGGGAACGGTTCATTTGGA
GACTTGTTGTCTGCAAACTCTGTACCATTAATCAAACCAGTGCCCCGAAT
CTCTCCAATGGGGGGACTATCAGAAAAGGCTTTTACACCATCTTGAAACT
TTGGCGCTATCTTATTTACTTGCTCAACAATATTTCTTTCCTTGTAAATC
TTAAGCGCTTCGATGGCAACGGCACAGGAAACAGGATGCCCAGAATAAGT
AAATCCATGAGAGAAAGAACCAAGTGTGTTGCTTTGAGAGTGAATGACTT
CTGAAACTTCGGGACTCACAAGAATAGCTCCAATGGGCATATATGCTGAA
GAAAGGGCCTTTGCGAAGGACACAAGATCTGGTTTAATGCTGTATTTGTC
ACAACCAAACATTGTGCCAAGTCTTCCAAATGCACAAATTACCTCATCTG
CTATAAAAAGGATGTCATATTTT
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