CN186138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.318e-75 Identity = 128/223 (57.40%), Postives = 172/223 (77.13%), Query Frame = 3 Query: 60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNI 728 M K H+N+VVIGHVD GKST GH++Y+LG +D++ I+ E+EA + K SFK+AW+LDKLK ERERG+TI + KFET RY T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTREHA+LA T+G+ Q+I NKMDAT P +S+ RY++I + +LK +GY+ KVPF+P+S + GDN+IERS N+ WY GPTL++ALD++ Sbjct: 1 MSSGKPHLNLVVIGHVDHGKSTLVGHILYRLGLVDQKTIQMLEEEAKKRGKESFKFAWLLDKLKEERERGVTIALTYMKFETRRYIFTIIDAPGHRDFVKNMITGASQADAALLVVSARKGEFEAGMSPEGQTREHAILAKTMGINQLIVAVNKMDATEPPWSQKRYEQIKTILGKFLKSLGYDISKVPFIPVSAWTGDNLIERSPNMPWYNGPTLVEALDSL 223
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.737e-74 Identity = 123/220 (55.91%), Postives = 169/220 (76.82%), Query Frame = 3 Query: 69 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNI 728 EK H+N+VVIGHVD GKST GHL+Y+LG I+++ ++ E++A K SFK+AW+LDK+K ERERGITID+ KFET +Y T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G++Q+I NKMDA Y + RY+ +V + ++K +GY +K+PF+P+S ++GDN+IERS N+ WY GPTL++ALD + Sbjct: 3 EKPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQL 222
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.836e-72 Identity = 132/204 (64.71%), Postives = 159/204 (77.94%), Query Frame = 3 Query: 120 STTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY-NPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNI 728 ST TGHLIYK GGID+R I+ +EK A EM K SFKYAWVLD+LK ERERGITI+IALWKFET +Y T+IDAPGHRDFIKNMITGTSQAD A+L++ + G FEAGISKDGQTREHA LA TLG+K MI C NKMD KYSK RYDEI E+ LK +G+ E+ ++P SG+ GDN++E+S + WY+GP L+DA+D + Sbjct: 1 STLTGHLIYKCGGIDQRTIDEYEKRATEMGKGSFKYAWVLDQLKDERERGITINIALWKFETKKYIVTIIDAPGHRDFIKNMITGTSQADVAILVVAAGQGEFEAGISKDGQTREHATLANTLGIKTMIICVNKMDDGQVKYSKERYDEIKGEMMKQLKNIGWKKAEEFDYIPTSGWTGDNIMEKSDKMPWYEGPCLIDAIDGL 204
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_RHYAM (Elongation factor 1-alpha (Fragment) OS=Rhynchosciara americana PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.900e-69 Identity = 126/161 (78.26%), Postives = 142/161 (88.20%), Query Frame = 3 Query: 216 SFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 698 SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P +S+ RY+EI KEVSSY+KK+GYNP V FVPISG+ GDNM+E S+N+ W KG Sbjct: 2 SFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPFSENRYEEIKKEVSSYIKKIGYNPVAVAFVPISGWHGDNMLEPSSNMRWLKG 162
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.323e-67 Identity = 120/222 (54.05%), Postives = 165/222 (74.32%), Query Frame = 3 Query: 60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS-TNLDWYKGPTLLDALD 722 M ++K H+N+VVIGH+D GKST G L+Y++G +D R+I+++E+EA +M + ++KYAWVLDKLK ERE+GITID+ +KFET +Y+ T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAGIS GQTREH LA T+GV Q++ NKMD T YSK RY+EI ++ L+ VGY +++PF+P S +EG N+ +R+ WY GP L +A D Sbjct: 1 MSEKKPHLNLVVIGHIDHGKSTLMGRLLYEIGAVDPRLIQQYEEEAKKMGRETWKYAWVLDKLKEEREKGITIDLGFYKFETKKYFFTLIDAPGHRDFVKNMITGASQADVALLVVSAKEGEFEAGISPAGQTREHVFLAKTMGVDQLVVAINKMD--TVNYSKERYEEIKNQLIRLLRMVGYKVDEIPFIPTSAWEGVNVSKRTPEKTPWYDGPCLYEAFD 220
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 4.381e-66 Identity = 121/221 (54.75%), Postives = 161/221 (72.85%), Query Frame = 3 Query: 60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD 722 M +K H+N++ IGHVD GKST G L+Y+ G I +IE + KEA + K +F++AWV+D+ K ERERG+TID+A KFET +YY T+IDAPGHRDF+KNMITGTSQAD A+L+I + G G+ + QTREHA LA TLGV QM+ NKMDAT+P YS+ RY+E+ + L+ +G+ + + FVPISG++GDN+ + S N+ WYKGPTLL ALD Sbjct: 1 MASQKPHLNLITIGHVDHGKSTLVGRLLYEHGEIPAHIIEEYRKEAEQKGKATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQMVVAINKMDATSPPYSEKRYNEVKADAEKLLRSIGF--KDISFVPISGYKGDNVTKPSPNMPWYKGPTLLQALD 214
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.760e-66 Identity = 116/221 (52.49%), Postives = 156/221 (70.59%), Query Frame = 3 Query: 60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD 722 M K H+N+ IGHVD GKST G ++Y++G ID+ +IE++ KEAA K +F++AWV+D LK ERERG+TIDIA +F+T +YY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLGV Q+I NKMDAT P Y + RY+E+ +EV L+ VGY ++VPF+P+S + GDN+++ S WY GPT+LDAL+ Sbjct: 1 MADTKPHLNLAFIGHVDHGKSTLVGRMMYEMGAIDEHIIEQYRKEAAAKGKATFEFAWVMDSLKEERERGVTIDIAHQRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHVFLARTLGVNQLIVAINKMDATEPPYDEKRYNEVKEEVGKLLRMVGYKIDEVPFIPVSAYNGDNVVKHSDRTKWYTGPTVLDALN 214
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.326e-65 Identity = 117/221 (52.94%), Postives = 164/221 (74.21%), Query Frame = 3 Query: 60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD 722 M EK H+N+V+IGHVD GKST G L+++ G I + +I+ ++KEA E K +F++AWV+D+ K ERERG+TID+ KFET +YY T+IDAPGHRDF+KNMITGTSQAD AVL++ + G G+ QT+EHA LA TLGV Q+I NKMDAT P YS+ R++E+ E++ L +G+ + VP +P+SG++GDN+++ S NL W+KGPTL++AL+ Sbjct: 1 MASEKPHMNLVIIGHVDHGKSTLVGRLLFEHGEIPQHIIDEYKKEAEEKGKATFEFAWVMDRFKEERERGVTIDLTHRKFETDKYYFTIIDAPGHRDFVKNMITGTSQADAAVLVVSAREG---EGVM--AQTKEHAFLARTLGVPQLIAVVNKMDATQPPYSEKRFNEVKDEITKLLTPIGF--KNVPIIPLSGYKGDNIMKPSPNLSWWKGPTLMEALN 214
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 246.899 bits (629), Expect = 8.262e-65 Identity = 112/220 (50.91%), Postives = 159/220 (72.27%), Query Frame = 3 Query: 69 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNI 728 +K H+N++VIGH+D GKST G L+ G ID++ ++ E+ A ++ K S K+A++LD+LK ERERG+TI++ +FET +Y+ T+IDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + RY EIV +VS +++ G+N KV FVP+ GDN+ RS N+ WY GPTL + LD + Sbjct: 3 QKPHLNLIVIGHIDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPAGDNITHRSENMKWYNGPTLEEYLDQL 222
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 8.262e-65 Identity = 116/220 (52.73%), Postives = 161/220 (73.18%), Query Frame = 3 Query: 69 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKR-SFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN 725 +K H+N++V GH+D+GKSTT GH + LG +D+R I + +E+ + K +FKYAWV+D +K ERERGITID+A KFET +Y+ T+IDAPGHRDFIKNMITG S+ADCA+L++ + G + I+ GQ REHA L TLGV Q+I NKMD + KYS+ Y + V++ +K VGY E VPF+P+SG++GDN+++RS N+ WYKG TLL++ D+ Sbjct: 7 DKPHLNMIVTGHIDNGKSTTMGHFLMDLGVVDERTIAQHAEESEKTGKGDTFKYAWVMDNIKDERERGITIDLAFQKFETPKYFFTLIDAPGHRDFIKNMITGASEADCAILVLSAKEGETDTAIAAGGQAREHAFLLKTLGVNQLIVAVNKMDDS--KYSEEAYKKTVEKGEGLVKSVGYKLENVPFIPVSGWKGDNLVKRSENMPWYKGKTLLESFDD 224 The following BLAST results are available for this feature:
BLAST of CN186138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186138 ID=CN186138; Name=CN186138; organism=Citrus sinensis; type=EST; length=730bpback to top |