CN186138

Overview
NameCN186138
Unique NameCN186138
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:43..771. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.071e-92
Identity = 167/226 (73.89%), Postives = 188/226 (83.19%), Query Frame = 3
Query:   60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNL----DWYKGPTLLDALDN 725
            MGKEK H++IVVIGHVDSGKSTTTGHLIYK GGI+KR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGIS++GQTREHALLA+TLGVKQMI  CNKMD     +S+ RY+E+ KE+  YLKKVGYNP KVP VP SG+ G+N+ ER+        WYKGP LL+ALDN
Sbjct:    1 MGKEKQHVSIVVIGHVDSGKSTTTGHLIYKCGGIEKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETEKYSFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSQDRYEEVSKEMDLYLKKVGYNPAKVPKVPTSGWTGENLFERTDKTHALGKWYKGPCLLEALDN 226          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.929e-92
Identity = 167/223 (74.89%), Postives = 190/223 (85.20%), Query Frame = 3
Query:   60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNI 728
            MGKEKTHIN+VVIGHVDSGKSTTTGHLIYKLGGIDKR IE+FEKE++EM K SFKYAWVLDKLKAERERGITIDIALW+FET +Y+ TVIDAPGHRDFIKNMITGTSQAD A+L++ +    FE   SK+GQTREHALLAFTLGV+QMI   NKMD  T +Y ++R+DEI  EV  YLKKVGYN EK+PFV ISGF GDNM+ERS  + WYKG TL++ALD +
Sbjct:    1 MGKEKTHINLVVIGHVDSGKSTTTGHLIYKLGGIDKRTIEKFEKESSEMGKGSFKYAWVLDKLKAERERGITIDIALWQFETPKYHYTVIDAPGHRDFIKNMITGTSQADVALLVVPADR--FEGAFSKEGQTREHALLAFTLGVRQMIVGINKMD--TCEYKQSRFDEIFNEVDGYLKKVGYNTEKIPFVAISGFVGDNMVERSDKMPWYKGKTLVEALDTM 219          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.929e-92
Identity = 168/225 (74.67%), Postives = 187/225 (83.11%), Query Frame = 3
Query:   60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTN----LDWYKGPTLLDALD 722
            MGKEK H++IVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEAAEM K SFKYAWVLDKLKAERERGITIDIALWKFET +Y  T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAGIS++GQTREHALLA+TLGVKQMI  CNKMD     +SK RY+E+ KE+  YLKKVGYNP KVP VP SG+ G+N+ ER+        WYKGP LL+ALD
Sbjct:    1 MGKEKQHVSIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETDKYNFTIIDAPGHRDFIKNMITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSKERYEEVSKEMDLYLKKVGYNPPKVPKVPTSGWTGENLFERTGGDHALGKWYKGPCLLEALD 225          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 3.331e-90
Identity = 163/225 (72.44%), Postives = 186/225 (82.67%), Query Frame = 3
Query:   60 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYN--PEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNI 728
            MGKEK HIN+VVIGHV +GKSTTTGHLIY  GGIDKR IERFE+    + K SFKYAWVL K+KAERERGITIDI+LWKFET + + T+IDAPGHRDFIKNMITGTSQAD A+L+I S  G FEAG SK+GQTREHALLA TLGVKQMI CCNKMD  +  YS+ARY EI  E++S+L KVGY    E++PF+PISGF GDNMIE S N+ WYKGPTLL+ALDN+
Sbjct:    1 MGKEKPHINLVVIGHVVAGKSTTTGHLIYACGGIDKRTIERFEEGGQRIGKGSFKYAWVLAKMKAERERGITIDISLWKFETRKDFFTIIDAPGHRDFIKNMITGTSQADVAILVIASGAGEFEAGYSKNGQTREHALLANTLGVKQMIVCCNKMDDKSVNYSEARYKEIKNEMTSFLTKVGYAKVEERIPFIPISGFNGDNMIEHSANMPWYKGPTLLEALDNV 225          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_SPOFR (Elongation factor 1-alpha (Fragment) OS=Spodoptera frugiperda PE=1 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.820e-89
Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 3
Query:  102 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 698
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKG 199          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_HELZE (Elongation factor 1-alpha (Fragment) OS=Heliothis zea PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.820e-89
Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 3
Query:  102 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 698
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKG 199          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_HELVI (Elongation factor 1-alpha (Fragment) OS=Heliothis virescens PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.820e-89
Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 3
Query:  102 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 698
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKG 199          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.820e-89
Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 3
Query:  102 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 698
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKG 199          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.820e-89
Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 3
Query:  102 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 698
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKG 199          
BLAST of CN186138 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.820e-89
Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 3
Query:  102 HVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMEKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG 698
            HVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERERGITIDIALWKFET +YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I   NKMD+T P YS++R++EI KEVSSY+KK+GYNP  V FVPISG+ GDNM+E ST + W+KG
Sbjct:    1 HVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEASTKMPWFKG 199          
The following BLAST results are available for this feature:
BLAST of CN186138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_PORYE6.071e-9273.89Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A_CRYPV7.929e-9274.89Elongation factor 1-alpha OS=Cryptosporidium parvu... [more]
EF1AC_PORPU7.929e-9274.67Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A_BLAHO3.331e-9072.44Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A_SPOFR2.820e-8979.40Elongation factor 1-alpha (Fragment) OS=Spodoptera... [more]
EF1A_HELZE2.820e-8979.40Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELVI2.820e-8979.40Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELGL2.820e-8979.40Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI2.820e-8979.40Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM2.820e-8979.40Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186138 ID=CN186138; Name=CN186138; organism=Citrus sinensis; type=EST; length=730bp
CCCGGCGAAGAGACATTTTCCGAATATCATTTTAATAAGGTTTTTTCTAG
ATCTGCTTAATGGGTAAGGAGAAGACTCACATCAACATTGTGGTCATCGG
CCATGTCGACTCTGGAAAGTCGACCACCACCGGACACTTGATCTACAAGC
TTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCT
GAGATGGAGAAGAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCTCAA
GGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCG
AGACCACCAGGTACTACTGCACCGTCATTGATGCTCCTGGACATCGTGAC
TTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGCCGTCCT
TATCATTGACTCTACCACGGGGGGTTTTGAAGCTGGTATCTCCAAGGATG
GTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTGAAGCAG
ATGATTTGCTGCTGTAACAAGATGGATGCCACCACCCCCAAGTACTCAAA
GGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGAAGAAGG
TTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGTTTCGAG
GGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAAGGGTCC
AACCCTGCTGGATGCTCTTGACAATATCAA
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