DC900183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB33B_PONAB (Ras-related protein Rab-33B OS=Pongo abelii GN=RAB33B PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAKQV-TFHRKKNLQYYEISAKS---NYNFEKPFLYLARKLAGDPNLHFVESP 592 FK++++GD GKT R G F + E TIGV+ + +I+ WDTAGQE+F + YY + + ++D+T ++ ++P+W + C+ + +IP +L GNK D+++ QV F ++ +E SAK+ N + E F+ LA KL L + P Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEE-CKQHLLASDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPP 211
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB33B_HUMAN (Ras-related protein Rab-33B OS=Homo sapiens GN=RAB33B PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR---VCENIPIVLCGNKVDVKNR-QVKAKQV-TFHRKKNLQYYEISAKS---NYNFEKPFLYLARKLAGDPNLHFVESP 592 FK++++GD GKT R G F + E TIGV+ + +I+ WDTAGQE+F + YY + + ++D+T ++ ++P+W + C+ + +IP +L GNK D+++ QV F ++ +E SAK+ N + E F+ LA KL L + P Sbjct: 34 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEE-CKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLMLSQPP 211
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB32C_DICDI (Ras-related protein Rab-32C OS=Dictyostelium discoideum GN=rab32C PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 2 Query: 80 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVDV 430 S K+++VG GKT+ ++R+ F+ KY+PTIGV+ K+ WD AGQE+FG + Y+ + A+I+FD T T+ W D+ C EN+P +L NK D+ Sbjct: 28 SLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVLLQLWDIAGQERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDIDYCFNNENLPTILLANKCDL 146
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB27A_RAT (Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 49/162 (30.25%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVH----------PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW--HRDLCRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEK 529 K + +GD G GKT+ + ++ G+F K+ T+G++ P +I WDTAGQE+F L ++ +++FD+T ++ NV W + CEN IVLCGNK D+++ R VK ++ K + Y+E SA + N + Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISQ 172
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAS_LACBI (Ras-like protein OS=Laccaria bicolor PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 49/162 (30.25%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN--IPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 +KLV+VG GG GK+ + + F +Y+PTI E + + DTAGQE++ +R+ Y G+ ++++ +T+R +++ + T+ + + RV + PI++ GNK D+ +V +KQ + R+ ++ E SAKS N E F L R++ Sbjct: 9 YKLVVVGGGGEGKSCLTIQLIQSHFVDEYDPTIE-ESYRKQCVIDDEVALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYSITSRQSFEEIMTFQQQILRVKDKDYFPIIVVGNKCDLDKERVVSKQEGESLARQFGCKFIETSAKSRINVENAFYDLVREI 169
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 44/163 (26.99%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNL--QYYEISAKSNYNFEKPF 535 + Q DY FKL+++G+ GKT+F+ R+ F + T+G++ + + +I+ WDTAGQE++ + YY ++M+D+ + ++ V W + +N ++L GNK D+++ +V + + +L +++E SAK N N ++ F Sbjct: 15 ADQNFDY-MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVF 176
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 47/163 (28.83%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 80 SFKLVIVGDGGTGKTTFVKRHLTGEF-EKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVD-VKNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 +FK+++VGD G GKT + R G F + T+G++ + K++ WDTAGQE+F + YY ++++DVT + ++ ++ W ++ +++ ++L GNKVD + R VK + + L + E SAK+ N + F +A++L Sbjct: 63 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPF 535 FK+V++GD GK+ + R+ EF + TIGVE +++ WDTAGQE+F + YY A++++D+T R T+++V W +L + +L GNK D++N R V ++ ++ L + E SA + N + F Sbjct: 13 FKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAF 166
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RHO1_YEAST (GTP-binding protein RHO1 OS=Saccharomyces cerevisiae GN=RHO1 PE=1 SV=3) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15 Identity = 57/176 (32.39%), Postives = 84/176 (47.73%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKN--------RQVKAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 535 SQQ + KLVIVGDG GKT + G+F + Y PT+ E + D + ++ WDTAGQE + LR Y +I F + + +NV W ++ C+ +PI+L G KVD++N RQ + VT +++ YYE SAK+ Y + F Sbjct: 2 SQQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTV-FENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB27A_MOUSE (Ras-related protein Rab-27A OS=Mus musculus GN=Rab27a PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15 Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVH----------PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW--HRDLCRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYN 520 K + +GD G GKT+ + ++ G+F K+ T+G++ P +I WDTAGQE+F L ++ +++FD+T ++ NV W + CEN IVLCGNK D+++ R VK ++ K + Y+E SA + N Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTN 169 The following BLAST results are available for this feature:
BLAST of DC900183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900183 ID=DC900183; Name=DC900183; organism=Citrus sinensis; type=EST; length=672bpback to top |