DC900183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.721e-18 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FKL+++GD G GKT + R F Y TIG++ KI+ WDTAGQE+F + YY I+++D+T +++N+ W + + + +L GNK D++ R+V+ +Q R+ ++++E SAKS+ N ++ F LAR + Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 92.8189 bits (229), Expect = 1.721e-18 Identity = 61/186 (32.80%), Postives = 93/186 (50.00%), Query Frame = 2 Query: 62 QTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPE 610 Q DY FK+V++GD G GK+ + R EF + + TIGVE I+ WDTAGQE++ + YY A++++D+T R T+ NV W R+L NI I++ GNK D+ + + A++ + K+ L + E SA N EK F + ++ H + ALA E Sbjct: 7 QEYDY-LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEI-----YHIISKKALAAQE 186
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.248e-18 Identity = 52/167 (31.14%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQ--YYEISAKSNYNFEKPFLYLARKLAGDPNL 574 FKLV +G+ GKT+ + R + +F+ Y+ TIG++ + +R WDTAGQE+F L Y AII++D+T ++ N W D+ +++ IVL GNK D+ +++ ++ + K L+ + E SAK+ +N + F +A+ L G N+ Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENV 178
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RHA1_ARATH (Ras-related protein RHA1 OS=Arabidopsis thaliana GN=RHA1 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.248e-18 Identity = 57/172 (33.14%), Postives = 95/172 (55.23%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESP 592 KLV++GD G GK++ V R + +F + E TIG N ++F WDTAGQE++ L YY AII+FD+T + +++ W ++L + N+ + L GNK D+ + R+V A++ + ++N L + E SAK+ N + F +A++L P + E+P Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRL---PRVQPAENP 180
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.248e-18 Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFL 538 + Q +DY FK+V++GD GKT + R EF + TIGVE ++ WDTAGQE++ + YY A++++D+T R T+ ++P W +L NI I+L GNK D+++++ + F +K+ L + E SA E FL Sbjct: 8 ASQKIDYV-FKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFL 170
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB7_PRUAR (Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.248e-18 Identity = 50/165 (30.30%), Postives = 84/165 (50.91%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDV---KNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLAR 550 K++I+GD G GKT+ + +++ +F +Y+ TIG + + WDTAGQE+F L +Y C ++++DV +++N+ W + EN P V+ GNK+DV +R V K+ K N+ Y+E SAK +N + F +A+ Sbjct: 10 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPFVVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAK 174
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.248e-18 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDVK-NRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FKL+++GD G GKT + R F Y TIG++ KI+ WDTAGQE+F + YY I+++D+T +++N+ W + + + +L GNK D++ R+V+ +Q R+ ++++E SAKS+ N ++ F LAR + Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18 Identity = 52/165 (31.52%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 80 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC-RVCENIPIVLCGNKVDV-----KNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 S KLV++G+ GK++ V R ++ +F + EPTIG N ++F WDTAGQE+F L YY + Q A++++DVT ++ W ++L + ++I I L GNK+D+ + + + + +K L ++E SAK+ N FL + K+ Sbjct: 7 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 171
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18 Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++D+ LTY+NV W ++L NI I+L GNK D+++ R V + F K L + E SA N E F Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAF 165
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.935e-18 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQVKAKQV----TFHRKKNLQYYEISAKSNYNFEKPF 535 FK+V++GD G GK+ + R EF + + TIGVE + I+ WDTAGQE++ + YY A++++DVT T++NV TW ++L + NI ++L GNK D+ R + A Q +F K++L + E SA N E F Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDL--RHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAF 167 The following BLAST results are available for this feature:
BLAST of DC900183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900183 ID=DC900183; Name=DC900183; organism=Citrus sinensis; type=EST; length=672bpback to top |