DC900183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 49/165 (29.70%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 535 S Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 49/165 (29.70%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 535 S Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 49/165 (29.70%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 535 S Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 49/165 (29.70%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQV----KAKQVTFHRKKNLQYYEISAKSNYNFEKPF 535 S Q DY FK++I+G+ GKT+F+ R+ F + T+G++ + N +I+ WDTAGQE++ + YY I+M+D+T ++ V W + +N ++L GNK D+++ +V + +Q+ H +++E SAK N N ++ F Sbjct: 15 SDQNFDY-MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADH--LGFEFFEASAKDNINVKQTF 176
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FKL+++GD G GK+ + R + + Y TIGV+ + I+ WDTAGQE+F + YY I+++DVT R +Y NV W +++ R EN+ +L GNK D+ ++V F + + E SAK+ N E+ F+ +A ++ Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 48/161 (29.81%), Postives = 86/161 (53.42%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FKL+++GD G GK+ + R + + Y TIGV+ + I+ WDTAGQE+F + YY I+++DVT +++ NV W +++ R C+++ +L GNK D+ +++ + + + E SAKS+ N E+ F+ +A ++ Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEI 169
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB18_CAEBR (Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 48/168 (28.57%), Postives = 90/168 (53.57%), Query Frame = 2 Query: 80 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC--ENIPIVLCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNL 574 + K++I+G+ G GK++ + R + F+ + TIGV+ + +++ WDTAGQE+F L YY Q I ++DVT+R +++ + W ++ C +N+ ++ NK+D+ NR V ++ + F ++ + E SAK+ + F L K+ P+L Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKHWMTEVDTYCTNDNVIKMMVANKIDMPNRTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQ----VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FK +I+GD G GK+ + + +F TIGVE + KI+ WDTAGQE+F + YY A++++D+T R TY ++ +W D + N I+L GNK D++ ++ +AKQ F + L + E SAK+ N E FL A+K+ Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ--FAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQ----VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FK +I+GD G GK+ + + +F TIGVE + KI+ WDTAGQE+F + YY A++++D+T R TY ++ +W D + N I+L GNK D++ ++ +AKQ F + L + E SAK+ N E FL A+K+ Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ--FAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQ----VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FK +I+GD G GK+ + + +F TIGVE + KI+ WDTAGQE+F + YY A++++D+T R TY ++ +W D + N I+L GNK D++ ++ +AKQ F + L + E SAK+ N E FL A+K+ Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ--FAEENGLLFLEASAKTGENVEDAFLEAAKKI 172 The following BLAST results are available for this feature:
BLAST of DC900183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900183 ID=DC900183; Name=DC900183; organism=Citrus sinensis; type=EST; length=672bpback to top |