DC900183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQ----VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FK +I+GD G GK+ + + +F TIGVE + KI+ WDTAGQE+F + YY A++++D+T R TY ++ +W D + N I+L GNK D++ ++ +AKQ F + L + E SAK+ N E FL A+K+ Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ--FAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQ----VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FK +I+GD G GK+ + + +F TIGVE + KI+ WDTAGQE+F + YY A++++D+T R TY ++ +W D + N I+L GNK D++ ++ +AKQ F + L + E SAK+ N E FL A+K+ Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ--FAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 90.1225 bits (222), Expect = 1.115e-17 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCE-NIPIVLCGNKVDVKNRQ----VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FK +I+GD G GK+ + + +F TIGVE + KI+ WDTAGQE+F + YY A++++D+T R TY ++ +W D + N I+L GNK D++ ++ +AKQ F + L + E SAK+ N E FL A+K+ Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQ--FAEENGLLFLEASAKTGENVEDAFLEAAKKI 172
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: YPT7_SCHPO (GTP-binding protein ypt7 OS=Schizosaccharomyces pombe GN=ypt7 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 47/164 (28.66%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-----ENIPIVLCGNKVDVKNRQ---VKAKQVTF-HRKKNLQYYEISAKSNYNFEKPFLYLAR 550 K++I+G+ G GKT+ + +++ +F K Y+ TIG + + + + WDTAGQE+F L +Y C ++++DV +++ + +W + E P +L GNKVDV+ ++ K+K + F + + Y+E SAK N ++ F +A+ Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPF 535 FKLV++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE++ + YY A++++DVT R T++N W ++L NI ++L GNK D+++ + +F +++L + E SA N E F Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAF 167
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 59/163 (36.20%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKN-RQV---KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FKLV+VGD GKT V+R TG F + TIGV+ +++ WDTAGQE+F + YY AI+ +D++ R T+ +VP W D+ + NI +L GNK D+ + R+V +A+ + H L E SAK + N E+ F +A +L Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEH-YDILCAIETSAKDSSNVEEAFTRVATEL 178
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB3_DROME (Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 50/167 (29.94%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 56 SQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNL------QYYEISAKSNYNFEKPF 535 + Q DY FKL+I+G+ GKT+F+ R+ F + T+G++ F + +++ WDTAGQE++ + YY I+M+DVT ++ +V W + +N ++L GNK D+++++V ++F R + L +++E SAK N N + F Sbjct: 14 ADQNFDY-MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRV----ISFERGRQLADQLGVEFFETSAKENVNVKAVF 175
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB33_CIOIN (Putative Ras-related protein Rab-33 OS=Ciona intestinalis GN=COS41.2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 57/167 (34.13%), Postives = 89/167 (53.29%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKF-GGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCEN---IPIVLCGNKVDVKNR-QVKAKQVT-FHRKKNLQYYEISAKSNY---NFEKPFLYLARKL 556 FK++++GD GKT R TG+F +K E TIGV+ + +I+ WDTAGQE+F + YY + + +DVT +++ +P+W + R N IP +L GNK D+K++ +V T F ++ +E SAK++ N E FL +A KL Sbjct: 16 FKIIVIGDSDVGKTCLTYRFCTGKFPEKTEATIGVDFRERTLDIDGEQIKLQLWDTAGQERFRKSMVPHYYRNVHAVVFTYDVTKGRSFQGLPSWIEECERYSLNASEIPRILVGNKCDLKDQAEVDTNSATRFADANSMPLFETSAKADSEMGNIEAIFLTVAHKL 182
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 56/183 (30.60%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQV--TFHRKKNLQYYEISAKSNYNFEKPFLYLA----RKLAGDPNLHFVESPALAPPE 610 FKL+++GD G GK+ + R + + Y TIGV+ + I+ WDTAGQE+F + YY I+++DVT + ++ NV W ++ R EN+ +L GNK D+ +++V V F + + + E SAK+ N E+ F+ +A ++A P P + P E Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQE 191
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB27B_MOUSE (Ras-related protein Rab-27B OS=Mus musculus GN=Rab27b PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG----------KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL--CRVCENIPIVLCGNKVDVKN-RQVKAKQV-TFHRKKNLQYYEISAKSNYNFEK 529 KL+ +GD G GKTTF+ R+ +F K+ T+G++ + K+ WDTAGQE+F L ++ ++MFD+T++ ++ NV W L CEN IVL GNK D+ + R+V +Q K + Y+E SA + N EK Sbjct: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEK 172 The following BLAST results are available for this feature:
BLAST of DC900183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900183 ID=DC900183; Name=DC900183; organism=Citrus sinensis; type=EST; length=672bpback to top |