DC900183
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB27A_PIG (Ras-related protein Rab-27A OS=Sus scrofa GN=RAB27A PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVH----------PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW--HRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYN 520 K + +GD G GKT+ + ++ G+F K+ T+G++ P +I WDTAGQE+F L ++ +++FD+T ++ NV W + CEN IVLCGNK D+++++V ++ K + Y+E SA + N Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRVVKEEEARGLAEKYGIPYFETSAANGTN 169
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RB27A_CANFA (Ras-related protein Rab-27A OS=Canis familiaris GN=RAB27A PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 47/162 (29.01%), Postives = 80/162 (49.38%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVH----------PLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTW--HRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVT--FHRKKNLQYYEISAKSNYNFEK 529 K + +GD G GKT+ + ++ G+F K+ T+G++ P +I WDTAGQE+F L ++ +++FD+T ++ NV W + CEN IVLCGNK D+++++V ++ K + Y+E SA + N + Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRVVKEEDARGLAEKYGIPYFETSAANGTNISQ 172
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAP1B_XENTR (Ras-related protein Rap-1b OS=Xenopus tropicalis GN=rap1b PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 +KLV++G GG GK+ + + G F +KY+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++P++L GNK D+++ +V K Q + N + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAP1B_XENLA (Ras-related protein Rap-1b OS=Xenopus laevis GN=rap1b PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKNRQVKAK---QVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 +KLV++G GG GK+ + + G F +KY+PTI + + + + DTAG E+F +RD Y +GQ +++ +TA+ T+ ++ + RV +++P++L GNK D+++ +V K Q + N + E SAKS N + F L R++ Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 165
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RALA_HUMAN (Ras-related protein Ral-A OS=Homo sapiens GN=RALA PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 49/161 (30.43%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVDVKN-RQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKL 556 K+++VG GG GK+ + + EF + YEPT + + + +++ DTAGQE + +RD Y+ G+ + +F +T ++ + + RV EN+P +L GNK D+++ RQV ++ ++ N+ Y E SAK+ N +K F L R++ Sbjct: 16 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 175
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 44/160 (27.50%), Postives = 86/160 (53.75%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKNRQV--KAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 KL+++GD G GK+ + R G F + TIG++ +I+ WDTAGQE+F + YY ++++DVT ++ ++ W R++ +++ +L GNK D+ ++V ++ + + +++ E SAK++ N E+ F+ LA+ + Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDI 176
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB4A_ECHMU (Probable Ras-related protein Rab-4A OS=Echinococcus multilocularis PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 47/162 (29.01%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKA---KQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 556 FK +I+G+ GTGKT ++R+ +F + TIG E + ++ WDTAGQE+F + YY ++++D+T R ++ V W D + + ++L GNK D+++ + + TF ++ LQ+ E SA + N + F R L Sbjct: 10 FKFLIIGNAGTGKTCILRRYTERKFFPNTQHTIGAEFGSRVISVDGTHVKIQIWDTAGQERFRSMARSYYHDAVGTLLVYDITNRTSFGAVEQWLGDARHLATPGVVVILVGNKKDLRDTDGQVTHWEANTFAQENGLQFIETSALTGENIDDAFTSCVRVL 171
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RAB21_GEOCY (Ras-related protein Rab-21 OS=Geodia cydonium GN=RAB21 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 53/180 (29.44%), Postives = 91/180 (50.56%), Query Frame = 2 Query: 86 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV-KNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQ 616 K+V++G+G GKT+ V R+ +F K+E T+ +I+ WDTAGQE++ L YY Q AII++D+T ++ W ++L R+ + + + + GNK+D+ + R V K + + ++Y SAK + + FL LA+++ L + PPE Q Sbjct: 18 KVVLLGEGAVGKTSLVLRYSENKFNDKHEQTLQASFVEKRLNIGGKRIQLAIWDTAGQERYHALGPIYYRDSQGAIIVYDITDEDSFHKARNWIKELKRMLGDKVTLCIVGNKIDLDRQRTVSEKDALEYAESVGAKHYYTSAKQSKGVAELFLDLAKRI-----LEANPPSSSTPPESQ 192
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = 2 Query: 83 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDV-KNRQVKAKQV-TFHRKKNLQYYEISAKSNYNFEKPFLYLA 547 FKL+++GD GK+ F+ R + Y TIGV+ ++ WDTAGQE+F + YY II++D+T ++ NV W ++ R +++ +L GNK D+ +NR V + ++ + + E SAK + N E+ FL ++ Sbjct: 9 FKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMS 166
BLAST of DC900183 vs. ExPASy Swiss-Prot
Match: RHOD_HUMAN (Rho-related GTP-binding protein RhoD OS=Homo sapiens GN=RHOD PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 50/168 (29.76%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 80 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDV--------KNRQVKAKQVTFHRKKNL-------QYYEISAKSNYNFEKPF 535 S K+V+VGDGG GKT+ + G F + Y PT+ E + ++ + + WDTAGQ+ + LR +Y ++ FDVT+ ++ N+ W+ ++ C+ +PI++ G K D+ K R+ + VT+HR + + Y E SA+ + N F Sbjct: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 The following BLAST results are available for this feature:
BLAST of DC900183 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900183 ID=DC900183; Name=DC900183; organism=Citrus sinensis; type=EST; length=672bpback to top |