DC900180

Overview
NameDC900180
Unique NameDC900180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433G_CHICK (14-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.179e-42
Identity = 85/130 (65.38%), Postives = 96/130 (73.85%), Query Frame = 2
Query:   17 SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGG 406
            S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD  ++ G
Sbjct:  113 SETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 242          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 5.179e-42
Identity = 84/133 (63.16%), Postives = 101/133 (75.94%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEE 400
            E+L+P +++ ES VF+ KM+GDYYRY AEF   + RKE AD SL           +EL PTHPIRLGLALNFSVFY+EI+N  ++AC LAKQAFD+AIA+LD + E  YKDSTLIMQLLRDNLTLWTSD  +E
Sbjct:  106 ENLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRDNLTLWTSDACDE 238          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 87/132 (65.91%), Postives = 98/132 (74.24%), Query Frame = 2
Query:   17 SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL-PEEGGE 409
            + T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   +EGGE
Sbjct:  113 NETQHESKVFYLKMKGDYYRYLAEVATGEKRVGVVESSEKSYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQZDDEGGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433G_BOVIN (14-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 85/130 (65.38%), Postives = 96/130 (73.85%), Query Frame = 2
Query:   17 SSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGG 406
            S T  ES VFY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI N+PE+ACHLAK AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD  ++ G
Sbjct:  113 SETQIESKVFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 242          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 86/136 (63.24%), Postives = 98/136 (72.06%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            HLI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDNLTLWT+D   EEGGE
Sbjct:  106 HLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGE 241          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433S_MOUSE (14-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 86/136 (63.24%), Postives = 98/136 (72.06%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            HLI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDNLTLWT+D   EEGGE
Sbjct:  106 HLIKGAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADSAGEEGGE 241          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433S_HUMAN (14-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 86/136 (63.24%), Postives = 98/136 (72.06%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            HLI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDNLTLWT+D   EEGGE
Sbjct:  106 HLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGE 241          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.479e-41
Identity = 86/136 (63.24%), Postives = 98/136 (72.06%), Query Frame = 2
Query:    5 HLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            HLI  +   ES VFY KMKGDYYRYLAE    DD+K   D +             E+PPT+PIRLGLALNFSVF+YEI NSPE A  LAK  FDEA+A+L +L+E+SYKDSTLIMQLLRDNLTLWT+D   EEGGE
Sbjct:  106 HLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGE 241          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433F_HUMAN (14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 SV=4)

HSP 1 Score: 166.007 bits (419), Expect = 1.276e-40
Identity = 85/127 (66.93%), Postives = 95/127 (74.80%), Query Frame = 2
Query:   32 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            ES VFY KMKGDYYRYLAE    + +    + S             ++ PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433F_RAT (14-3-3 protein eta OS=Rattus norvegicus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.176e-40
Identity = 85/127 (66.93%), Postives = 94/127 (74.02%), Query Frame = 2
Query:   32 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            ES VFY KMKGDYYRYLAE    + +    + S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
The following BLAST results are available for this feature:
BLAST of DC900180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433G_CHICK5.179e-4265.3814-3-3 protein gamma OS=Gallus gallus GN=YWHAG PE=... [more]
14331_ENTHI5.179e-4263.1614-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=... [more]
143G1_ONCMY6.764e-4265.9114-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]
1433G_BOVIN6.764e-4265.3814-3-3 protein gamma OS=Bos taurus GN=YWHAG PE=1 S... [more]
1433S_SHEEP7.479e-4163.2414-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_MOUSE7.479e-4163.2414-3-3 protein sigma OS=Mus musculus GN=Sfn PE=1 S... [more]
1433S_HUMAN7.479e-4163.2414-3-3 protein sigma OS=Homo sapiens GN=SFN PE=1 S... [more]
1433S_BOVIN7.479e-4163.2414-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=... [more]
1433F_HUMAN1.276e-4066.9314-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 S... [more]
1433F_RAT2.176e-4066.9314-3-3 protein eta OS=Rattus norvegicus GN=Ywhah P... [more]

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Properties
Property NameValue
Genbank descriptionDC900180 VSS Citrus sinensis cDNA clone VS28206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900180 ID=DC900180; Name=DC900180; organism=Citrus sinensis; type=EST; length=596bp
TGAACACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACT
ATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCT
GATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGC
TACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTG
GCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCACCT
GAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCTATTGCTGA
ACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGC
AGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAGGAG
GGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGG
GATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCT
ATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGTATAATAC
TTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGTTTA
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