DC900180

Overview
NameDC900180
Unique NameDC900180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1582 contig Csv1_Contig1582:410..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.176e-40
Identity = 85/127 (66.93%), Postives = 94/127 (74.02%), Query Frame = 2
Query:   32 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            ES VFY KMKGDYYRYLAE    + +    + S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.176e-40
Identity = 85/127 (66.93%), Postives = 94/127 (74.02%), Query Frame = 2
Query:   32 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 409
            ES VFY KMKGDYYRYLAE    + +    + S              + PTHPIRLGLALNFSVFYYEI N+PE+AC LAKQAFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   EE GE
Sbjct:  118 ESKVFYLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEHMQPTHPIRLGLALNFSVFYYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEAGE 244          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14332_ENTHI (14-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.712e-40
Identity = 85/133 (63.91%), Postives = 101/133 (75.94%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEE 400
            E L+ +STS ES VF+ KM+GDYYRY AEF   + RKE AD SL           S L PTHPIRLGLALNFSVFYY+I+N  ++AC LAK+AFDEAI +LD + EESYK+STLIMQLLRDNLTLWTSD+ ++
Sbjct:  106 EFLLKNSTSIESKVFFKKMEGDYYRYYAEFTVDEKRKEVADKSLAAYQEATDTAAS-LVPTHPIRLGLALNFSVFYYQIMNDADKACQLAKEAFDEAIQKLDEVPEESYKESTLIMQLLRDNLTLWTSDMGDD 237          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.252e-37
Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEG 403
            ++L+P+++  +S VF+ KM+GDYYRYLAE    D R E    SL           + LP THPIRLGLALNFSVF+YEI N   +AC LAK AFD AIAELD L ++SYKDSTLIMQLLRDNLTLW SD   EG
Sbjct:  114 DYLLPNASPDDSKVFFLKMQGDYYRYLAEVATDDARTEVVQKSLDAYTKATTAAEN-LPTTHPIRLGLALNFSVFFYEIQNDAAKACELAKSAFDSAIAELDQLQDDSYKDSTLIMQLLRDNLTLWASDQTAEG 246          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.460e-36
Identity = 74/129 (57.36%), Postives = 93/129 (72.09%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 388
            ++LI      E+ +FYYKM GDYYRYLAE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDNLTLW+S+
Sbjct:  115 KNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWSSE 243          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.906e-36
Identity = 74/129 (57.36%), Postives = 92/129 (71.32%), Query Frame = 2
Query:    2 EHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 388
            ++LI      E+ +FYYKM GDYYRYLAE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDNLTLW S+
Sbjct:  115 KNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSE 243          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36
Identity = 73/126 (57.94%), Postives = 89/126 (70.63%), Query Frame = 2
Query:   11 IPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 388
            I      E+ +FYYKM GDYYRYLAE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDNLTLW S+
Sbjct:  114 ITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSE 239          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.595e-35
Identity = 78/134 (58.21%), Postives = 96/134 (71.64%), Query Frame = 2
Query:   32 ESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEG---GEQSKGD 424
            E  +F+ KMKGDYYRY AE     +  E + H+ +          + LPPT+PI+LGLALN+SVF+YEILN  E+AC +AK AFDEAI ELD+L+EE Y+DSTLIMQLLRDNLTLWTS   EEG   G++ KGD
Sbjct:  124 EYNIFFLKMKGDYYRYKAEVVTGPEHSEVSKHAAESYKEATEKAKT-LPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDNLTLWTS--REEGNVMGDEGKGD 254          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.695e-35
Identity = 72/126 (57.14%), Postives = 88/126 (69.84%), Query Frame = 2
Query:   11 IPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD 388
            I      E+ +FYYKM GDYYRY AE +  +   ++ + + +          +EL  THPIRLGLALNFSVFYYEI N PE+AC LAK AFD AI E+DS+ +E+YKDSTLIMQLLRDNLTLW S+
Sbjct:  114 ITEKIGAEAKIFYYKMMGDYYRYSAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSE 239          
BLAST of DC900180 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.346e-32
Identity = 73/129 (56.59%), Postives = 84/129 (65.12%), Query Frame = 2
Query:   20 STSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGG 406
            S+  + T FY KMKGDYYRYLAE    + R    + S K            + PTHPIRLGLALN+SVFYYEI             AFD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD  ++ G
Sbjct:   41 SSIEQKTSFYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI------------TAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG 157          
The following BLAST results are available for this feature:
BLAST of DC900180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433F_MOUSE2.176e-4066.9314-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S... [more]
1433F_BOVIN2.176e-4066.9314-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
14332_ENTHI3.712e-4063.9114-3-3 protein 2 OS=Entamoeba histolytica PE=3 SV=... [more]
14331_SCHMA2.252e-3759.7014-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
14332_ECHGR1.460e-3657.3614-3-3 protein homolog 2 OS=Echinococcus granulosu... [more]
14332_ECHMU1.906e-3657.3614-3-3 protein homolog 2 OS=Echinococcus multilocu... [more]
14331_ECHMU9.460e-3657.9414-3-3 protein homolog 1 OS=Echinococcus multilocu... [more]
1433_ENCCU3.595e-3558.2114-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]
14331_ECHGR4.695e-3557.1414-3-3 protein homolog 1 OS=Echinococcus granulosu... [more]
1433G_SHEEP6.346e-3256.5914-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]

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Properties
Property NameValue
Genbank descriptionDC900180 VSS Citrus sinensis cDNA clone VS28206 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900180 ID=DC900180; Name=DC900180; organism=Citrus sinensis; type=EST; length=596bp
TGAACACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTGTTTTACT
ATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAAAGGTGCT
GATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACGAGGCTGC
TACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATCAGACTTG
GCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAACTCACCT
GAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCTATTGCTGA
ACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTTATTATGC
AGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACCGGAGGAG
GGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGG
GATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCT
ATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGTATAATAC
TTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGTTTA
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