CN186125

Overview
NameCN186125
Unique NameCN186125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.825e-22
Identity = 60/166 (36.14%), Postives = 84/166 (50.60%), Query Frame = -1
Query:  257 LCVNNCGFTGNPATNNMCQKCFN------ATAPTTASAVFXXXXXXXXXXXXGVAIMKFSSEKSLRSRPI-IRFGSSDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 733
            LC NNCGF G+ AT NMC KC              ASAV               A +     KS+    + ++  S          +E+   + K P+       RC+ C ++VGL GF+CRCG LFCG HRY+D HDCS++Y  A ++ IA+ NPV+KA K+ ++
Sbjct:   17 LCTNNCGFFGSAATMNMCSKCHKDMLFQQEQGAKFASAVSGTSSSSNIIKETFTAALVDIETKSVEPMTVSVQPSSVQVVAEVVAPEEAA--KPKGPS-------RCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22
Identity = 45/71 (63.38%), Postives = 57/71 (80.28%), Query Frame = -1
Query:  257 EPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 469
            EP      VNRC+ CR++VGL GFRCRCGELFC  HR+S+ H+CS+DYK AGR+ IAR NPVI+AAKI+++
Sbjct:  104 EPLSPVLFVNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.869e-21
Identity = 60/199 (30.15%), Postives = 85/199 (42.71%), Query Frame = -1
Query:  257 LCVNNCGFTGNPATNNMCQKCFN----------------------------------------ATAPTTASAVFXXXXXXXXXXXXGVAIMKFSSEKSLRSRPIIRFGSSDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 733
            LC   CGF GNP TN MC  C+                                         +T  +T+S++              VA  +  S    ++ P      +  + T  Q  E   +  ++P  +K   NRC  CR+KVGL GF CRCG ++CG HRYSD H+CSY+YK    + I +ENPV+   KI ++
Sbjct:   13 LCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLEKPKQKK---NRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21
Identity = 61/199 (30.65%), Postives = 84/199 (42.21%), Query Frame = -1
Query:  257 LCVNNCGFTGNPATNNMCQKCFN----------------------------------------ATAPTTASAVFXXXXXXXXXXXXGVAIMKFSSEKSLRSRPIIRFGSSDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 733
            LC   CGF GNP TN MC  C+                                         +   +TAS+V              VA  +  S    ++ P      +  + T  Q  E   +  ++P  +K   NRC  CR+KVGL GF CRCG ++CG HRYSD H+CSY+YK    + I +ENPV+   KI ++
Sbjct:   13 LCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLEKPKQKK---NRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.001e-20
Identity = 63/196 (32.14%), Postives = 85/196 (43.37%), Query Frame = -1
Query:  257 LCVNNCGFTGNPATNNMCQKCFN----------------ATAPTTASAVFXXXXXXXXXXXXGVAIMKFSSE-------------KSLRSRPIIRFGSSDAAGTTGQNQESTDRREKEPNVE--------KRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 733
            LC   CGF GNP TN MC  C+                 AT+ ++ S                 A+   SS              +S+ S  +       A   T   Q S     ++P+ E        K+  NRC  CR+KVGL GF CRCG ++CG HRYSD H+CSY+YK    + I +ENPV+   KI ++
Sbjct:   13 LCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20
Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = -1
Query:  257 KFSSEKSLRSRPIIRFGSSDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 580
            K ++ K+  S P++   S   +  +    E     EK P + K   NRC  CR+KVGL GF CRCG LFCG HRYSD+H+C YDYK      I +ENPV+ A KI R+
Sbjct:  111 KITTPKTEVSEPVVTQPSPSVSQPSSSQSE-----EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.804e-20
Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = -1
Query:  257 KFSSEKSLRSRPIIRFGSSDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 580
            K ++ K+  S P++   S   +  +    E     EK P + K   NRC  CR+KVGL GF CRCG LFCG HRYSD+H+C YDYK      I +ENPV+ A KI R+
Sbjct:  111 KITTPKTEVSEPVVTQPSPSVSQPSTSQSE-----EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = -1
Query:  266 RSRPIIRFGSSDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKI 556
            ++R  +   SS AA        S+    ++P       NRC+ CRRKVGL GF+CRCG  FCG HRY+D H C +DYK +GR+ IA++NPV+ A K+
Sbjct:  142 KTRWRVAVASSAAAAADASYSSSSPATGEQPEA-----NRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.561e-18
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = -1
Query:  257 SDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 526
            S  + TT Q  E   +  ++P  +K   NRC  CR+KVGL GF CRCG ++CG HRYSD H+CSY+YK    + I +ENPV+   KI ++
Sbjct:  137 SSVSDTTQQPSEEQSKSLEKPKQKK---NRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.561e-18
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = -1
Query:  257 SDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 526
            S  + TT Q  E   +  ++P  +K   NRC  CR+KVGL GF CRCG ++CG HRYSD H+CSY+YK    + I +ENPV+   KI ++
Sbjct:  137 SSVSDTTQQPSEEQSKSLEKPKQKK---NRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
The following BLAST results are available for this feature:
BLAST of CN186125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP2_ARATH1.825e-2236.14Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ5.309e-2263.38Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN6_PONAB5.869e-2130.15AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN7.666e-2130.65AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
ZFAN6_HUMAN1.001e-2032.14AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN5_MOUSE2.230e-2045.37AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN5_HUMAN3.804e-2045.37AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP14_ORYSJ5.494e-1945.36Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN6_RAT3.561e-1846.67AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE3.561e-1846.67AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G13_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186125 ID=CN186125; Name=CN186125; organism=Citrus sinensis; type=EST; length=745bp
TTTTTTTTTTTTTTTTTAAAACACAACATTTTTTTTCATTTCTGAAGAAA
CAAACTCTAGAAAAGAACGATAATTATAAATTATCGAAAGAGAAACAATT
CATAAATCTGATCAACTCTCTCTCTAAAACCCTCTTTCGATCCTTTGATC
ACCATATTCCTGAGGAAAAAATCTGGGGAAATGACTTCGTTTCATGATGG
GTATAAATTGATCTGAATTTTTGACCTTTCAATCGGGGTTTCAAATTAAG
CTTTCAAACTCTAACGATCTTGGCAGCTTTGATCACCGGATTTTCTCTCG
CGATGGGGTCGCGACCGGCAAATTTATAATCATAGCTGCAATCGTGACGA
TCGGAGTACCGATGTTCGCCGCAAAACAGCTCCCCGCAGCGACATCTAAA
TCCGGGCAATCCAACCTTTCGTCGACAACCGGAGCACCGATTCACAACTC
GTTTCTCTACGTTGGGTTCCTTCTCTCGCCGATCCGTCGACTCCTGATTT
TGACCGGTCGTACCGGCAGCATCGGATGACCCAAACCGGATGATAGGCCG
AGATCTCAAAGATTTCTCGCTAGAAAACTTCATGATCGCTACACCGGTTC
CTCCGCCGCCGCCGCCGCTTGTACTCGAACCAAAAACGGCGCTTGCGGTG
GTGGGGGCGGTTGCGTTGAAACATTTCTGGCACATATTATTTGTGGCTGG
ATTACCGGTGAAGCCACAGTTGTTTACGCAAAGAGTCAAAGTTTC
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