CN186125

Overview
NameCN186125
Unique NameCN186125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.651e-18
Identity = 55/160 (34.38%), Postives = 75/160 (46.88%), Query Frame = -1
Query:  257 LCVNNCGFTGNPATNNMCQKCFNATAPTTASAVFXXXXXXXXXXXXGVAIMKFSSEKSLRSRPIIRFGSS-DAAGTTGQNQESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 733
            +C   CGF G+ AT+ +C KC+    P     +              VA +         S  +I+  S     GTT     +T  + K         NRC  CR+KVGL GF CRCG +FCG H       C++DYK AGR+ IAR NP++ A KI ++
Sbjct:   17 MCAAGCGFFGSAATDGLCSKCYKQQQPQPRHLIGTAAGDSDKTSLKVVADL---------STLVIKDNSGVGGEGTTVMAPPATVTKAK---------NRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREAIARHNPLVVAPKINKI 152          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.142e-17
Identity = 53/161 (32.92%), Postives = 75/161 (46.58%), Query Frame = -1
Query:  260 CVNNCGFTGNPATNNMCQKCFNATAPTTASAVFXXXXXXXXXXXXGVAIMKFSSEKSLRSRPIIRFGSSDAAGTTGQNQ----ESTDRREKEPNVEKRVVNRCSGCRRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVR 730
            C   CG  G    NN+C  C+  +                                 L+  P +RF        T Q+Q     ++   E+EP V+KR   RC  C+RKVG+ GF+CRCG +FCG HRY + H C +DYK +GR  +A + P+I+A K+ R
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYKKSV--------------------------------LQHSPALRFEPE-----TEQSQCCPPTNSPAVEEEP-VKKR---RCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQR 129          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16
Identity = 50/162 (30.86%), Postives = 67/162 (41.36%), Query Frame = -1
Query:  257 TLCVNNCGFTGNPATNNMCQKCFNATAPTTASAVFXXXXXXXXXXXXGVAIMKFSSEKSLRSRPIIRFGSSDAAGTTGQNQESTDRREKEPNVEKRVVNRCSGC--RRKVGLPGFRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 736
            +LC+  CGF     T N+C KC+N                             F  ++S R        +  A   T Q              E  V+    GC  ++KVGL GF CRCG LF   HRY + H C  DYK A  D +A++NPV+K  K+ R+
Sbjct:    6 SLCIRGCGFFSTSQTKNLCSKCYN----------------------------DFLKDESARYLATFNVNTKAAEEVTAQ--------------EATVLGSKGGCACKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
BLAST of CN186125 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.920e-12
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = -1
Query:  257 EKRVVNRCSGCRRKVGLPG-FRCRCGELFCGEHRYSDRHDCSYDYKFAGRDPIARENPVIKAAKIVRV 457
            +K+  N C  C +K GL   + CRCG  FC  HRY++ H C+YDYK AGR  +   NPV+ A K+ ++
Sbjct:  660 KKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI 727          
The following BLAST results are available for this feature:
BLAST of CN186125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP10_ORYSJ4.651e-1834.38Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP10_ARATH5.142e-1732.92Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH5.685e-1630.86Putative zinc finger A20 and AN1 domain-containing... [more]
ANUB1_HUMAN2.920e-1244.12AN1-type zinc finger and ubiquitin domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G13_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186125 ID=CN186125; Name=CN186125; organism=Citrus sinensis; type=EST; length=745bp
TTTTTTTTTTTTTTTTTAAAACACAACATTTTTTTTCATTTCTGAAGAAA
CAAACTCTAGAAAAGAACGATAATTATAAATTATCGAAAGAGAAACAATT
CATAAATCTGATCAACTCTCTCTCTAAAACCCTCTTTCGATCCTTTGATC
ACCATATTCCTGAGGAAAAAATCTGGGGAAATGACTTCGTTTCATGATGG
GTATAAATTGATCTGAATTTTTGACCTTTCAATCGGGGTTTCAAATTAAG
CTTTCAAACTCTAACGATCTTGGCAGCTTTGATCACCGGATTTTCTCTCG
CGATGGGGTCGCGACCGGCAAATTTATAATCATAGCTGCAATCGTGACGA
TCGGAGTACCGATGTTCGCCGCAAAACAGCTCCCCGCAGCGACATCTAAA
TCCGGGCAATCCAACCTTTCGTCGACAACCGGAGCACCGATTCACAACTC
GTTTCTCTACGTTGGGTTCCTTCTCTCGCCGATCCGTCGACTCCTGATTT
TGACCGGTCGTACCGGCAGCATCGGATGACCCAAACCGGATGATAGGCCG
AGATCTCAAAGATTTCTCGCTAGAAAACTTCATGATCGCTACACCGGTTC
CTCCGCCGCCGCCGCCGCTTGTACTCGAACCAAAAACGGCGCTTGCGGTG
GTGGGGGCGGTTGCGTTGAAACATTTCTGGCACATATTATTTGTGGCTGG
ATTACCGGTGAAGCCACAGTTGTTTACGCAAAGAGTCAAAGTTTC
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