CN186122

Overview
NameCN186122
Unique NameCN186122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5755 contig Csv1_Contig5755:284..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.139e-41
Identity = 87/168 (51.79%), Postives = 111/168 (66.07%), Query Frame = -2
Query:  340 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSE 834
            L LPPGFRF+PTDEEL+V+YL RK         +I E+D+ K DPW LP       +E YFFS R+ KYPNG+R NR  GSGYWKATG DK I+T    + VG+KK LVFY GK P G++T+WIMHEYRL+     P ++N     +   D+WVLCRI+ K+  A+ +
Sbjct:   12 LSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTE--GRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRN----GSTKLDDWVLCRIYKKQTSAQKQ 169          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.986e-40
Identity = 77/159 (48.43%), Postives = 107/159 (67.30%), Query Frame = -2
Query:  361 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLK 828
            +PPGFRFHPTDEEL+  YL +K+       + I +VD+ KS+PW+LP       +E YFF+ R+ KYP G R+NRAT +GYWKATG D++I +S+   ++GMKKTLVFY+G+ P G ++ W+MHEYRL        K ++    + A D WVLC++ LK
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL------DGKFSYHYISSSAKDEWVLCKVCLK 172          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 8.986e-40
Identity = 82/165 (49.70%), Postives = 105/165 (63.64%), Query Frame = -2
Query:  343 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKS 828
            LPPGFRFHPTDEEL+  YL  KIF   L    I EVD+ + +PW+LP       +E YF+S R+ KYP G R+NRAT +GYWKATG DK++ +  G Q+VGMKKTLVFY+G+ P G +T W+MHEYRL         +N         + WV+CR+F K    K+
Sbjct:   22 LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL---------ENDHSHRHTCKEEWVICRVFNKTGDRKN 177          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.002e-39
Identity = 84/170 (49.41%), Postives = 109/170 (64.12%), Query Frame = -2
Query:  340 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIF----LKKRGAKSE 828
            LPPGFRFHPTDEEL+  YL RK+      +  I EVD+ K +PW LPG      +E YFFS R+ KYP G R+NRAT +GYWKATG D++I +S+   +VGMKKTLVFY+G+ P G +++W+MHEYRL        K ++      + D WV+ R+F    L   GA SE
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRL------EGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSE 180          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.002e-39
Identity = 84/162 (51.85%), Postives = 107/162 (66.05%), Query Frame = -2
Query:  358 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 834
            L LP GFRFHPTDEELV  YL R+  + P+   +I E+D+ K +PW+LP       +E YFFS R+ KYPNG+R NRA G+GYWKATG DK I   +    +G+KK LVFY GK P G +T+WIMHEYRL   AN  +  +  +   +  D+WVLCRI+ KK
Sbjct:   48 LNLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPK---TLGIKKALVFYAGKAPKGIKTNWIMHEYRL---ANVDRSASTNKKNNLRLDDWVLCRIYNKK 203          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.891e-38
Identity = 91/227 (40.09%), Postives = 133/227 (58.59%), Query Frame = -2
Query:  232 RLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLP-----GDVAQ-ERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAV-----ATDNWVLCRIFLKKRGAKSEDEETCTEIGGTRANG----PKPV------------FYDFMRKEERADLNLVP 831
            ++PPGFRFHPT+EEL+  YL++K+ +  +   +I +VD+ K +PWD+      G   Q + YFFS ++ KYP G R+NRAT +G+WKATG DK I  S G +I GM+KTLVFY+G+ PHG ++DWIMHEYRL     +P+     +  ++       + WV+CRIF KK   K+ +    + +GG   +G    PK              F + M +  + +LNL P
Sbjct:   15 QVPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDK-IIYSNGRRI-GMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLN----SPVGGASLSGGGDTPKTTSSQIFNEDTLDQFLELMGRSCKEELNLDP 235          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.411e-38
Identity = 80/165 (48.48%), Postives = 103/165 (62.42%), Query Frame = -2
Query:  358 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPG------DVAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 834
            L +PPGFRFHPTDEEL+  YL++K+    +   +I E+D+ K +PWDL            E YFFS ++ KYP G R+NRAT +G+WKATG DK I  +   +I GM+KTLVFY G+ PHG +TDWIMHEYRL                 V  D WV+CR+F+KK
Sbjct:    8 LSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRI-GMRKTLVFYVGRAPHGKKTDWIMHEYRL-----------DQDNVDVQEDGWVVCRVFMKK 160          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.196e-37
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = -2
Query:  349 LPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLP------GDVAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAAN-APQKKNFAQTPAVATDNWVLCRIFLKKRGA 828
            +PPGFRFHPTDEELV  YL++K+ +  +    I ++D+ K +PWDL        +   + YFFS ++ KYP G R+NRAT +G+WKATG DK I     + ++GM+KTLVFY+G+ P+G ++DWIMHEYRL T  N  PQ+           + WV+CR+F K+  A
Sbjct:    7 VPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLR--HSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQE-----------EGWVVCRVFKKRLAA 160          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.174e-37
Identity = 80/177 (45.20%), Postives = 105/177 (59.32%), Query Frame = -2
Query:  340 PGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDVA---QERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANA-----PQKKNFAQ--------TPAVATDNWVLCRIFLKKRGAKSE 822
            PGFRFHPTDEELV  YLKRK+    LP  +I +VD+ K DPWDLP   A   +E YF+  R+ KY N  R NR TG G+WKATG D+ I +    + +G+KK+LVFYRG+   G +TDW+MHE+RL + +++     P   N  Q            + D W +CRIF K     S+
Sbjct:   22 PGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKKTNAVSSQ 198          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.174e-37
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = -2
Query:  352 LRLPPGFRFHPTDEELVVQYLKRKIFACPLPASIIPEVDVCKSDPWDLPGDV---AQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQI--------------ATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRG 834
            L LPPGFRFHPTD E+++ YL +K+      +  I EVD+ K +PWDLP       +E YFFS ++ KYP G R+NRAT  GYWKATG D++I              ++++  Q+VGMKKTLVFY G+ P G++T+W+MHE+RL    +A    +         D WV+C++F KK+G
Sbjct:   17 LFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRL----HANLHNHHPNLRLNPKDEWVVCKVFHKKQG 190          
The following BLAST results are available for this feature:
BLAST of CN186122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC55_ARATH2.139e-4151.79NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC54_ARATH8.986e-4048.43Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC31_ARATH8.986e-4049.70Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC98_ARATH2.002e-3949.41Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NA102_ARATH2.002e-3951.85NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC43_ARATH2.891e-3840.09NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC76_ORYSJ8.411e-3848.48NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC7_ARATH3.196e-3746.11NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC94_ARATH4.174e-3745.20Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC77_ORYSJ4.174e-3744.38NAC domain-containing protein 77 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186122 ID=CN186122; Name=CN186122; organism=Citrus sinensis; type=EST; length=838bp
GACAACATTAGATTACTTGATGATGATGGCTAATTGGGTATTCTGCATTT
TTCTAATCAGAAACGCCAATTACTTGTACAGAACACTAATTAAAAAGAGA
GAAATTATTGAAAATGTTTACTGCTGTTTTCTTCTAAAGTAAGGGAAGCT
ATTGCAACTACTCTCTTCATGATCGTCTGATTCATTTGAAGAAACTTCAG
TGACTCCACTTGAGCCTGAGGAAGATGAAGTTGGAACAAGGTTCAAGTCA
GCCCTTTCCTCCTTTCTCATAAAATCATAAAAAACCGGCTTGGGCCCGTT
AGCCCTGGTTCCTCCAATTTCGGTGCACGTTTCCTCATCCTCACTCTTGG
CTCCTCTTTTCTTCAAAAAGATGCGGCATAGAACCCAATTGTCCGTTGCC
ACAGCTGGGGTCTGGGCGAAGTTTTTCTTTTGAGGGGCATTGGCAGCAGT
AACAAGGCGGTATTCATGCATGATCCAATCAGTCCTAGAGCCGTGTGGTG
GCTTGCCTCTATAAAAAACGAGAGTTTTTTTCATTCCCACGATTTGGTTG
CCCCTGGAAGTCGCAATTTGCTTGTCAAGCCCAGTTGCCTTCCAATAACC
AGACCCCGTGGCCCTGTTCGATCTGTTCCCGTTTGGGTACTTAGCTTCCC
TTGTGCTGAAAAAATACCTCTCTTGCGCCACATCACCTGGCAAATCCCAA
GGATCAGACTTGCAAACATCAACTTCAGGAATTATGGAAGCGGGCAAGGG
GCAGGCAAAAATCTTGCGCTTCAAGTACTGAACAACAAGTTCTTCGTCCG
TAGGATGGAACCGGAATCCCGGAGGCAGTCTCAGCACA
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