CN186122

Overview
NameCN186122
Unique NameCN186122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5755 contig Csv1_Contig5755:284..1120. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20
Identity = 58/139 (41.73%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  439 LPPGFRFHPTDEELVVQYLKRKIFACPLPA-SIIPEVDVCKSDPWDLP--------GDVAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAAN 828
            L  GFRF+PT+ EL+  YL+ ++        S+IP +DV   +P  LP        GD A++  FF  R+ +   G R +R TGSGYWKATG    +  S  N+++G+KKT+VFY GK P G +T W M+EY+ V  A+
Sbjct:    5 LSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGD-AEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVF-SPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVETAS 141          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.925e-19
Identity = 55/130 (42.31%), Postives = 70/130 (53.85%), Query Frame = -2
Query:  460 PPGFRFHPTDEELVVQYLKRKIFACPLPA--SIIPEVDVCKSDPWDLPGDVAQER-----YFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGN-QIVGMKKTLVFYRGKPPHGSRTDWIMHEY 825
            P GFRF PTD E+V  YL+ K           +I  VD+C  DPWDLP     +      YFF  +E KY  G+R  R T SG+WK TG+   I    G+ + +G K+ LVF   K   GS++DW MHEY
Sbjct:    4 PVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVF---KNHGGSKSDWAMHEY 130          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 57/134 (42.54%), Postives = 72/134 (53.73%), Query Frame = -2
Query:  460 LRLPPGFRFHPTDEELVVQYL--KRKIFACPLPASIIPEVDVCKSDPWDLP-------GDVAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEY 834
            +  P G RF PTDEE+VV YL  K            I  V VC+ DPW+LP        DVA    FF  +E KY  G++  R T SG+WK+TG  K I   R  Q +G KK L+FY  K    S++DW++HEY
Sbjct:    1 METPVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAW--CFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPI--MRNRQQIGEKKILMFYTSKE---SKSDWVIHEY 127          
BLAST of CN186122 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.229e-14
Identity = 50/133 (37.59%), Postives = 67/133 (50.38%), Query Frame = -2
Query:  460 GFRFHPTDEELVVQYLKRKIFACPLP--ASIIPEVDVCKSDPWDLPGDVAQER-----YFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIATSRG------NQIVGMKKTLVFYRGKPPHGSRTDWIMHEY 819
            GF F P DEELV  YL+ KI           I EV++C  DPW+L      +      YFFS RE     GNR +R T SG WK TG   ++    G         +G K+ LVF  G+ P  +++DW++HE+
Sbjct:    6 GFGFRPNDEELVGHYLRNKIEGNTSRDVEVAISEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENN--KGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEF 136          
The following BLAST results are available for this feature:
BLAST of CN186122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC61_ARATH1.594e-2041.73Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC5_ARATH3.925e-1942.31NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC3_ARATH1.649e-1742.54NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
NAC1_ARATH2.229e-1437.59NAC domain-containing protein 1 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002G11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186122 ID=CN186122; Name=CN186122; organism=Citrus sinensis; type=EST; length=838bp
GACAACATTAGATTACTTGATGATGATGGCTAATTGGGTATTCTGCATTT
TTCTAATCAGAAACGCCAATTACTTGTACAGAACACTAATTAAAAAGAGA
GAAATTATTGAAAATGTTTACTGCTGTTTTCTTCTAAAGTAAGGGAAGCT
ATTGCAACTACTCTCTTCATGATCGTCTGATTCATTTGAAGAAACTTCAG
TGACTCCACTTGAGCCTGAGGAAGATGAAGTTGGAACAAGGTTCAAGTCA
GCCCTTTCCTCCTTTCTCATAAAATCATAAAAAACCGGCTTGGGCCCGTT
AGCCCTGGTTCCTCCAATTTCGGTGCACGTTTCCTCATCCTCACTCTTGG
CTCCTCTTTTCTTCAAAAAGATGCGGCATAGAACCCAATTGTCCGTTGCC
ACAGCTGGGGTCTGGGCGAAGTTTTTCTTTTGAGGGGCATTGGCAGCAGT
AACAAGGCGGTATTCATGCATGATCCAATCAGTCCTAGAGCCGTGTGGTG
GCTTGCCTCTATAAAAAACGAGAGTTTTTTTCATTCCCACGATTTGGTTG
CCCCTGGAAGTCGCAATTTGCTTGTCAAGCCCAGTTGCCTTCCAATAACC
AGACCCCGTGGCCCTGTTCGATCTGTTCCCGTTTGGGTACTTAGCTTCCC
TTGTGCTGAAAAAATACCTCTCTTGCGCCACATCACCTGGCAAATCCCAA
GGATCAGACTTGCAAACATCAACTTCAGGAATTATGGAAGCGGGCAAGGG
GCAGGCAAAAATCTTGCGCTTCAAGTACTGAACAACAAGTTCTTCGTCCG
TAGGATGGAACCGGAATCCCGGAGGCAGTCTCAGCACA
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