DC900174

Overview
NameDC900174
Unique NameDC900174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8201 contig Csv1_Contig8201:73..521. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_ENDMA (Orotidine 5'-phosphate decarboxylase OS=Endomyces magnusii GN=URA3 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.123e-31
Identity = 65/115 (56.52%), Postives = 87/115 (75.65%), Query Frame = 1
Query:    1 TGRKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGS-KLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD 342
            T R+L ++M  K +NLC + DV T+AELL +A+K+GP IC++KTHVDI+ DFT D    KL A+A+KH F+IFEDRKFADIGNTV  Q   G++ I++WADI NAH + G GI++
Sbjct:   22 TARRLLKLMSDKRTNLCASLDVTTSAELLSLADKLGPYICMVKTHVDIISDFTYDETVVKLVALAKKHGFMIFEDRKFADIGNTVKNQYSKGVYRIVEWADITNAHSVPGEGIIN 136          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_CANGA (Orotidine 5'-phosphate decarboxylase OS=Candida glabrata GN=URA3 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 2.123e-31
Identity = 72/145 (49.66%), Postives = 97/145 (66.90%), Query Frame = 1
Query:   10 KLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSK-LRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            KL ++M +K++NLC + DV T +ELL++ + +GP ICLLKTHVDIL DF+ +   K L+ +A KHNFLIFEDRKFADIGNTV +Q   G++ I +WADI NAH ++G GIV                    AE+SS G+LA G++
Sbjct:   20 KLLKLMHEKKTNLCASLDVTTTSELLKLVDTLGPYICLLKTHVDILSDFSFENTVKPLKEMAAKHNFLIFEDRKFADIGNTVKLQYTSGVYKIAEWADITNAHGVTGQGIVTGLKQGAEETTNEPRGLLMLAELSSKGSLAHGEY 164          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_TORDE (Orotidine 5'-phosphate decarboxylase OS=Torulaspora delbrueckii GN=URA3 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.773e-31
Identity = 70/145 (48.28%), Postives = 96/145 (66.21%), Query Frame = 1
Query:   10 KLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSK-LRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            KL  +M +K++NLC + DV T  ELL++ + +GP ICLLKTH+DI+ DF+ D   K L+ +A+KHNF+IFEDRKFADIGNTV +Q   G++ I +WADI NAH ++G GIV                    AE+SS G+LA G++
Sbjct:   20 KLLNLMHEKKTNLCASLDVNTTEELLKLVDTLGPYICLLKTHIDIISDFSIDGTVKPLKELAKKHNFMIFEDRKFADIGNTVKLQYSSGVYRIAEWADITNAHGVTGAGIVTGLKQAAQETTNEPRGLLMLAELSSKGSLAHGEY 164          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_HANAN (Orotidine 5'-phosphate decarboxylase OS=Hansenula anomala GN=URA3 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 3.622e-31
Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSK-LRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++LF VM  K+SNLC + DV T  E L++ + +GP ICL+KTH+DI+ DF+ +   + L+ +A KHNFLIFEDRKFADIGNTV  Q  GG F I  W+DI NAH ++G GIV                    AE+SS G+LAKG++
Sbjct:   20 KRLFGVMESKKSNLCASIDVRTTKEFLELVDTLGPYICLVKTHIDIIDDFSIEGTIEPLKKLASKHNFLIFEDRKFADIGNTVKAQYSGGAFKIATWSDITNAHGVTGEGIVRGLKEAASEVSQEPRGLLMLAELSSKGSLAKGEY 165          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_EMENI (Orotidine 5'-phosphate decarboxylase OS=Emericella nidulans GN=pyrG PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 4.730e-31
Identity = 71/149 (47.65%), Postives = 95/149 (63.76%), Query Frame = 1
Query:   10 KLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDFRA 438
            KLF +  +K++N+ ++ADV T+AELL +A+++GP I +LKTH+DIL D TP   S L+++A KHNFLIFEDRKF DIGNTV  Q  GG   I +WA IIN  I+ G GIV+                      AEM+S G+LA G++ A
Sbjct:   23 KLFSIAEEKKTNVTVSADVTTSAELLDLADRLGPYIAVLKTHIDILTDLTPSTLSSLQSLATKHNFLIFEDRKFIDIGNTVQKQYHGGALRISEWAHIINCAILPGEGIVEALAQTTKSPDFKDANQRGLLILAEMTSKGSLATGEYTA 171          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_CANGY (Orotidine 5'-phosphate decarboxylase OS=Candida glycerinogenes GN=URA3 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.730e-31
Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGS--KLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD---XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            R+LF +M +K+SNLC + D+    +LL I + +GP ICL+KTH+DI+ DFT + G+   L+ +A+KHNF+IFEDRKFADIGNTV  Q + G+F I +WADI NAH ++G GIV                    AE+SS G+LA G++
Sbjct:   17 RRLFSIMEEKKSNLCASLDITETEKLLSILDTIGPYICLVKTHIDIVSDFTYE-GTVLPLKELAKKHNFMIFEDRKFADIGNTVKNQYKSGVFRIAEWADITNAHGVTGAGIVSGLKEAAQETTSEPRGLLMLAELSSKGSLAYGEY 162          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_PACTA (Orotidine 5'-phosphate decarboxylase OS=Pachysolen tannophilus GN=URA3 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 6.178e-31
Identity = 72/147 (48.98%), Postives = 99/147 (67.35%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAI--AEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            R+LF++M KK+SNLC + DV++  ELL++ EK+GP ICL+KTH+D + DF+ D G+ L  +  ++K+NF+IFEDRKFADIGNTV  Q + GIF I  WADI NAH ++G GIV                    AE+SS G+LA G++
Sbjct:   21 RRLFELMEKKQSNLCASIDVSSTDELLKLVEKLGPVICLVKTHIDTIDDFSYD-GTILPLVELSKKYNFMIFEDRKFADIGNTVKNQYKNGIFKIAQWADITNAHGVTGEGIVKGLKEAALETTLEPRGLLMLAELSSKGSLAYGEY 166          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_YAMOH (Orotidine 5'-phosphate decarboxylase OS=Yamadazyma ohmeri GN=URA3 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.069e-31
Identity = 70/146 (47.95%), Postives = 96/146 (65.75%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSK-LRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD---XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++L ++M  K++NLC + DV T AE L + +K+GP ICL+KTH+DI+ DF+ D   K L  +A+KHNF+IFEDRKFADIGNTV  Q  GG++ I  W+DI NAH I+G GIV+                   AE+SS G+LA G++
Sbjct:   16 QRLLRLMDTKKTNLCASVDVKTTAEFLSLIDKLGPYICLVKTHIDIIDDFSFDGTIKPLLELAKKHNFMIFEDRKFADIGNTVKSQYSGGVYKIAQWSDITNAHGITGAGIVNGLKEAAQETTSEPRGLLMLAELSSKGSLAYGEY 161          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_PICPA (Orotidine 5'-phosphate decarboxylase OS=Pichia pastoris GN=URA3 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.069e-31
Identity = 72/147 (48.98%), Postives = 95/147 (64.63%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGS--KLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            R+LF +M +K+SNLC + DV T  ELL++ +K+GP ICL KTH+DI+ DFT D G+   L  +++KH FLIFEDRKFADIGNTV  Q +GG++ I  WADI NAH + G GIV                    AE+SS G++A G +
Sbjct:   18 RRLFALMEQKQSNLCASVDVRTTKELLELLDKLGPFICLAKTHIDIIDDFTYD-GTILPLLELSKKHKFLIFEDRKFADIGNTVKHQYQGGVYKIAQWADITNAHGVIGSGIVKGLKEAATETTDQPRGLLMLAELSSKGSIAHGKY 163          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_COCIM (Orotidine 5'-phosphate decarboxylase OS=Coccidioides immitis GN=URA3 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 8.069e-31
Identity = 66/148 (44.59%), Postives = 96/148 (64.86%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            R+LFQ+  +K+SN+ ++ADV T  ELL +A+++GP + +LKTH+DIL DF+ +  + L+++++KHNFLIFEDRKF DIGNTV  Q  GG   I +WA I+NA ++ GPGI+D                      A M+S G+LA G +
Sbjct:   22 RRLFQIATEKQSNVAVSADVTTTKELLDLADRLGPYMVVLKTHIDILADFSAETITGLQSLSQKHNFLIFEDRKFVDIGNTVQKQYHGGALHISEWAHIVNATVLPGPGIIDALAQVASAPDFPHASDRGLLILATMTSKGSLATGQY 169          
The following BLAST results are available for this feature:
BLAST of DC900174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_ENDMA2.123e-3156.52Orotidine 5'-phosphate decarboxylase OS=Endomyces ... [more]
PYRF_CANGA2.123e-3149.66Orotidine 5'-phosphate decarboxylase OS=Candida gl... [more]
PYRF_TORDE2.773e-3148.28Orotidine 5'-phosphate decarboxylase OS=Torulaspor... [more]
PYRF_HANAN3.622e-3148.63Orotidine 5'-phosphate decarboxylase OS=Hansenula ... [more]
PYRF_EMENI4.730e-3147.65Orotidine 5'-phosphate decarboxylase OS=Emericella... [more]
PYRF_CANGY4.730e-3147.62Orotidine 5'-phosphate decarboxylase OS=Candida gl... [more]
PYRF_PACTA6.178e-3148.98Orotidine 5'-phosphate decarboxylase OS=Pachysolen... [more]
PYRF_YAMOH8.069e-3147.95Orotidine 5'-phosphate decarboxylase OS=Yamadazyma... [more]
PYRF_PICPA8.069e-3148.98Orotidine 5'-phosphate decarboxylase OS=Pichia pas... [more]
PYRF_COCIM8.069e-3144.59Orotidine 5'-phosphate decarboxylase OS=Coccidioid... [more]

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Properties
Property NameValue
Genbank descriptionDC900174 VSS Citrus sinensis cDNA clone VS28201 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900174 ID=DC900174; Name=DC900174; organism=Citrus sinensis; type=EST; length=450bp
ACTGGGAGAAAATTGTTTCAAGTGATGGTGAAGAAGGAGAGTAATTTGTG
TTTGGCTGCTGATGTTGCCACTGCTGCTGAGTTGCTTCAAATTGCCGAGA
AGGTTGGACCAGAGATCTGCTTGTTGAAAACCCATGTCGATATATTGCCT
GATTTCACCCCAGATTTTGGTTCCAAACTTCGTGCGATTGCAGAAAAGCA
TAACTTCCTAATTTTTGAAGATCGCAAGTTTGCGGACATTGGTAACACTG
TGACCATGCAGGCTGAAGGTGGTATATTTTGTATATTGGATTGGGCCGAT
ATAATAAATGCTCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAA
ATTAAAGGGATTGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGA
GCTCAGCTGGTAACCTAGCAAAGGGAGACTTCAGAGCAGCTGGAAATGCG
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